| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is livK [C]
Identifier: 192290238
GI number: 192290238
Start: 1978361
End: 1979578
Strand: Reverse
Name: livK [C]
Synonym: Rpal_1842
Alternate gene names: 192290238
Gene position: 1979578-1978361 (Counterclockwise)
Preceding gene: 192290240
Following gene: 192290234
Centisome position: 34.46
GC content: 59.93
Gene sequence:
>1218_bases ATGAGACTCTTCGGACTTGCGGCCGTTGTCGCGGCGACATCGTTGTTCGCACCCGGCGTTGCGCTTGCGCAGAAATCCTA CGGCCCGGGAGCCAGTGACACCGAGATCAAAGTCGGCAATTTCGTGCCTTATAGCGGCCCGGCGTCGGCTTACGGCATCG TCGGCCAGGTCCAGAGCGCCTACGTCAAGATGCTGAACGAGAAAGGCGGCATCAACGGCCGCAAGATCAATTTCATTTCG TATGACGATGCCTACTCGCCGCCGAAGGCGGTGGAGCAGACCCGCAAGCTGGTCGAAGGCGACGAGGTGCTGTTCCTGTA CCACACGCTCGGTACGCCATCGAACACCGCCGTCATGAAATATCTGAACCAGAAGAAGGTGCCGCAGCTGATGCTGTCGA GCGGCGGCACGCGGTTCGGCGATGATCCGAAGACCTATCCGTGGACCATGCCGTTCAATCCGCCCTATCAGGCGGAGGGT CGGATCTACGCGAAGTGGATCATGGCAACCTATCCCAACGCAAAGATCGCCGTGCTGGTGGCGAACGACGACTACGGCAA GGACATCTACAAGGGCGTCAAGGACGGCTTCGGCGCCAAGACCTCGATGATCATTTCGGAGGCGACCTACGACATCACCG ATCCGACCATCGATTCGCAGATGGCCAAGCTCAAGGCTTCGGGCGCCGATCTGTTCCTCAATCTCTCCACGCCGAAATTC GCCGCGCTGGCGATCCGCAAGATGGGCGAACTCGGCTGGAAGCCGGTTCATGTTCTCAACAACGTCTCGTCGTCGGTCGG TGCAGTGATCAAACCAGCCGGGATGGAATATGCCCAGGACGCGATCACCGCGAACTACGTCAAGGACCCGACCGATCCGA CCTGGAAGAACGATCCGGGCGTGAAGGAGTGGGACGCCTTCCTCGAGAAATACATGCCGGGCGCCGATCGCTCCAACGGT CTGCTGCTGTATTCCTATGGCGCGGGGCAGACGCTGGAATACATCCTGAGGCAGGCTGGCGATAATCTGACCCGCGAGAA CATCATGAAGGTGGCGACCAGCCTGAAGGGCTACGCACCGGCCTCGCTGCTGCCAGGCATCACCATGAACACATCACCCA CCGATCATTTTCCGATCGAGCAGATGCAGCTGATGCGGTTCAAGGGCGACCGCTGGGAGATGTTCGGCGACGTGCTCGAG GCACGGGTCACCAACTAA
Upstream 100 bases:
>100_bases TCAGTCCACGTGATCGGGATTGCGCCCTCCTCCCGCGCGCGTCTAGTATCGCCACCGTGACGATCGAACAGATCGCGCCA AGAAAATGGGATGGAAACAG
Downstream 100 bases:
>100_bases TCAGCACTGCAGCGATTGACGGATGCGCGGGTTCTGAAGCGGGCCCGCGCATCAGCTTTTGGGATGATGCTCGCTCCGAG CACCCGCCCGATCAGTCCCC
Product: hypothetical protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MRLFGLAAVVAATSLFAPGVALAQKSYGPGASDTEIKVGNFVPYSGPASAYGIVGQVQSAYVKMLNEKGGINGRKINFIS YDDAYSPPKAVEQTRKLVEGDEVLFLYHTLGTPSNTAVMKYLNQKKVPQLMLSSGGTRFGDDPKTYPWTMPFNPPYQAEG RIYAKWIMATYPNAKIAVLVANDDYGKDIYKGVKDGFGAKTSMIISEATYDITDPTIDSQMAKLKASGADLFLNLSTPKF AALAIRKMGELGWKPVHVLNNVSSSVGAVIKPAGMEYAQDAITANYVKDPTDPTWKNDPGVKEWDAFLEKYMPGADRSNG LLLYSYGAGQTLEYILRQAGDNLTRENIMKVATSLKGYAPASLLPGITMNTSPTDHFPIEQMQLMRFKGDRWEMFGDVLE ARVTN
Sequences:
>Translated_405_residues MRLFGLAAVVAATSLFAPGVALAQKSYGPGASDTEIKVGNFVPYSGPASAYGIVGQVQSAYVKMLNEKGGINGRKINFIS YDDAYSPPKAVEQTRKLVEGDEVLFLYHTLGTPSNTAVMKYLNQKKVPQLMLSSGGTRFGDDPKTYPWTMPFNPPYQAEG RIYAKWIMATYPNAKIAVLVANDDYGKDIYKGVKDGFGAKTSMIISEATYDITDPTIDSQMAKLKASGADLFLNLSTPKF AALAIRKMGELGWKPVHVLNNVSSSVGAVIKPAGMEYAQDAITANYVKDPTDPTWKNDPGVKEWDAFLEKYMPGADRSNG LLLYSYGAGQTLEYILRQAGDNLTRENIMKVATSLKGYAPASLLPGITMNTSPTDHFPIEQMQLMRFKGDRWEMFGDVLE ARVTN >Mature_405_residues MRLFGLAAVVAATSLFAPGVALAQKSYGPGASDTEIKVGNFVPYSGPASAYGIVGQVQSAYVKMLNEKGGINGRKINFIS YDDAYSPPKAVEQTRKLVEGDEVLFLYHTLGTPSNTAVMKYLNQKKVPQLMLSSGGTRFGDDPKTYPWTMPFNPPYQAEG RIYAKWIMATYPNAKIAVLVANDDYGKDIYKGVKDGFGAKTSMIISEATYDITDPTIDSQMAKLKASGADLFLNLSTPKF AALAIRKMGELGWKPVHVLNNVSSSVGAVIKPAGMEYAQDAITANYVKDPTDPTWKNDPGVKEWDAFLEKYMPGADRSNG LLLYSYGAGQTLEYILRQAGDNLTRENIMKVATSLKGYAPASLLPGITMNTSPTDHFPIEQMQLMRFKGDRWEMFGDVLE ARVTN
Specific function: This Protein Is A Component Of The Leucine-Specific Transport System, Which Is One Of The Two Periplasmic Binding Protein-Dependent Transport Systems Of The High-Affinity Transport Of The Branched-Chain Amino Acids In E.Coli. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44250; Mature: 44250
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFGLAAVVAATSLFAPGVALAQKSYGPGASDTEIKVGNFVPYSGPASAYGIVGQVQSA CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH YVKMLNEKGGINGRKINFISYDDAYSPPKAVEQTRKLVEGDEVLFLYHTLGTPSNTAVMK HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH YLNQKKVPQLMLSSGGTRFGDDPKTYPWTMPFNPPYQAEGRIYAKWIMATYPNAKIAVLV HHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEE ANDDYGKDIYKGVKDGFGAKTSMIISEATYDITDPTIDSQMAKLKASGADLFLNLSTPKF ECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHH AALAIRKMGELGWKPVHVLNNVSSSVGAVIKPAGMEYAQDAITANYVKDPTDPTWKNDPG HHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC VKEWDAFLEKYMPGADRSNGLLLYSYGAGQTLEYILRQAGDNLTRENIMKVATSLKGYAP HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC ASLLPGITMNTSPTDHFPIEQMQLMRFKGDRWEMFGDVLEARVTN HHHCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MRLFGLAAVVAATSLFAPGVALAQKSYGPGASDTEIKVGNFVPYSGPASAYGIVGQVQSA CCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHH YVKMLNEKGGINGRKINFISYDDAYSPPKAVEQTRKLVEGDEVLFLYHTLGTPSNTAVMK HHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHH YLNQKKVPQLMLSSGGTRFGDDPKTYPWTMPFNPPYQAEGRIYAKWIMATYPNAKIAVLV HHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEEEEECCCCEEEEEE ANDDYGKDIYKGVKDGFGAKTSMIISEATYDITDPTIDSQMAKLKASGADLFLNLSTPKF ECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHH AALAIRKMGELGWKPVHVLNNVSSSVGAVIKPAGMEYAQDAITANYVKDPTDPTWKNDPG HHHHHHHHHHCCCCHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC VKEWDAFLEKYMPGADRSNGLLLYSYGAGQTLEYILRQAGDNLTRENIMKVATSLKGYAP HHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC ASLLPGITMNTSPTDHFPIEQMQLMRFKGDRWEMFGDVLEARVTN HHHCCCCEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA