| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is cysQ [H]
Identifier: 192290211
GI number: 192290211
Start: 1949016
End: 1949843
Strand: Reverse
Name: cysQ [H]
Synonym: Rpal_1815
Alternate gene names: 192290211
Gene position: 1949843-1949016 (Counterclockwise)
Preceding gene: 192290218
Following gene: 192290209
Centisome position: 33.95
GC content: 70.29
Gene sequence:
>828_bases ATGACTGCCGCGTTCGAACAGCCCGCCGTCGTTTCGGCCGAGCACGCCGCCGCTTTGCTCGAACCGCTCACCAAGCTGGT GCTGCGCGCCGGGGCGGCGATCATGGCGATCCCGCGCGACGCCAAGGTCACTCAGAAGCCGGACGGCTCGCCGGTGACGC CCGCCGATCTCGCCGCTGACCAGGTGATCGCCGAGGGGCTGGCGCAGATCGCTCCGCACGTCCCGGTGCTGTCCGAAGAA TGTTGCGGCAATGGACGACCGACGTCGGGCAGCTTCTTCGTGGTCGATCCGCTCGACGGCACCAAGGAGTACATCGCCGG CCGCAACGAATTCACCGTCAACCTGGCGCTGGTGTGCGACGGGGTGCCGGTGCTCGGCATCATCGGCGCGCCGGCTCGAG GGCTGGCGTGGCGCGGCGTGGTCGGCCATGGCGCTGAGCAACTGACTGTCGCCGCGGACGGGGTCAGCTTTGCAGCCACC GCCATCCGGACCAGGCCGCTGCCGCAGCCGGGCGAGCCGTGGACCGCAACGGTCAGCCGGTCGCATCTCGATCCCGCCAC CGTCGCCTTCATCGACGCCCGCCCCAGCGCCGTGCGCACGACGCTGGGTTCGTCGCTGAAATTCTGCTGGATCGCCGAAG GCAAGGCCGACATCTACCCGCGGCTGGCGCCGATCTGCGAGTGGGATATCGCGGCGGGCGCTGCGCTGGTCATCGCCGCG GGCGGCAAGGTGACCGACGCGACCGGCGCGCCGTTGCGGTTCGACGCACCGCGGCCGAACTTCATCGTGCCCGAATTCAT CGCCTGGGGCGACCCTGACGGTCGCTAG
Upstream 100 bases:
>100_bases AATCAGCCTTGGTTAATGGCTTGATACACTGCGGCTGCAGGCAGTGCCAACACAACGGTCCGGCACAAACCGGACCACCG ACCGAGGATGACACAGCTTG
Downstream 100 bases:
>100_bases CGCCGGAGCTATTCGGCGAGCGTTGCCAAGAGTCCCGGCCAGCGCTCGCGGGCGTCATGGAGATAACGCTCCGGATTGGC CGCGAAGGCATCGCGGTTTT
Product: inositol monophosphatase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTAAFEQPAVVSAEHAAALLEPLTKLVLRAGAAIMAIPRDAKVTQKPDGSPVTPADLAADQVIAEGLAQIAPHVPVLSEE CCGNGRPTSGSFFVVDPLDGTKEYIAGRNEFTVNLALVCDGVPVLGIIGAPARGLAWRGVVGHGAEQLTVAADGVSFAAT AIRTRPLPQPGEPWTATVSRSHLDPATVAFIDARPSAVRTTLGSSLKFCWIAEGKADIYPRLAPICEWDIAAGAALVIAA GGKVTDATGAPLRFDAPRPNFIVPEFIAWGDPDGR
Sequences:
>Translated_275_residues MTAAFEQPAVVSAEHAAALLEPLTKLVLRAGAAIMAIPRDAKVTQKPDGSPVTPADLAADQVIAEGLAQIAPHVPVLSEE CCGNGRPTSGSFFVVDPLDGTKEYIAGRNEFTVNLALVCDGVPVLGIIGAPARGLAWRGVVGHGAEQLTVAADGVSFAAT AIRTRPLPQPGEPWTATVSRSHLDPATVAFIDARPSAVRTTLGSSLKFCWIAEGKADIYPRLAPICEWDIAAGAALVIAA GGKVTDATGAPLRFDAPRPNFIVPEFIAWGDPDGR >Mature_274_residues TAAFEQPAVVSAEHAAALLEPLTKLVLRAGAAIMAIPRDAKVTQKPDGSPVTPADLAADQVIAEGLAQIAPHVPVLSEEC CGNGRPTSGSFFVVDPLDGTKEYIAGRNEFTVNLALVCDGVPVLGIIGAPARGLAWRGVVGHGAEQLTVAADGVSFAATA IRTRPLPQPGEPWTATVSRSHLDPATVAFIDARPSAVRTTLGSSLKFCWIAEGKADIYPRLAPICEWDIAAGAALVIAAG GKVTDATGAPLRFDAPRPNFIVPEFIAWGDPDGR
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=243, Percent_Identity=26.3374485596708, Blast_Score=69, Evalue=7e-12, Organism=Escherichia coli, GI1790659, Length=253, Percent_Identity=38.7351778656126, Blast_Score=146, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71995905, Length=170, Percent_Identity=30.5882352941176, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71995897, Length=170, Percent_Identity=30.5882352941176, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI193202572, Length=252, Percent_Identity=23.4126984126984, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324508, Length=194, Percent_Identity=34.5360824742268, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 28497; Mature: 28366
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAFEQPAVVSAEHAAALLEPLTKLVLRAGAAIMAIPRDAKVTQKPDGSPVTPADLAAD CCCCCCCCCEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH QVIAEGLAQIAPHVPVLSEECCGNGRPTSGSFFVVDPLDGTKEYIAGRNEFTVNLALVCD HHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCHHHHCCCCCEEEEEEEEEC GVPVLGIIGAPARGLAWRGVVGHGAEQLTVAADGVSFAATAIRTRPLPQPGEPWTATVSR CCCEEEEECCCCCCCEECCHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEC SHLDPATVAFIDARPSAVRTTLGSSLKFCWIAEGKADIYPRLAPICEWDIAAGAALVIAA CCCCCEEEEEEECCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEC GGKVTDATGAPLRFDAPRPNFIVPEFIAWGDPDGR CCCEECCCCCCEEECCCCCCEECCHHEECCCCCCC >Mature Secondary Structure TAAFEQPAVVSAEHAAALLEPLTKLVLRAGAAIMAIPRDAKVTQKPDGSPVTPADLAAD CCCCCCCCEECHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH QVIAEGLAQIAPHVPVLSEECCGNGRPTSGSFFVVDPLDGTKEYIAGRNEFTVNLALVCD HHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCEEEEECCCCCHHHHCCCCCEEEEEEEEEC GVPVLGIIGAPARGLAWRGVVGHGAEQLTVAADGVSFAATAIRTRPLPQPGEPWTATVSR CCCEEEEECCCCCCCEECCHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCCEEEEEC SHLDPATVAFIDARPSAVRTTLGSSLKFCWIAEGKADIYPRLAPICEWDIAAGAALVIAA CCCCCEEEEEEECCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEC GGKVTDATGAPLRFDAPRPNFIVPEFIAWGDPDGR CCCEECCCCCCEEECCCCCCEECCHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]