Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192290203

Identifier: 192290203

GI number: 192290203

Start: 1940823

End: 1941647

Strand: Reverse

Name: 192290203

Synonym: Rpal_1806

Alternate gene names: NA

Gene position: 1941647-1940823 (Counterclockwise)

Preceding gene: 192290204

Following gene: 192290200

Centisome position: 33.8

GC content: 65.7

Gene sequence:

>825_bases
ATGCGGCAGCCTTTCGCGATGCACTGCGGCGCCCGGCATCTCCGACCTGCACTCGCGGCGGTTACCGCCGCGATCACGCT
CCTCGCCACGGCGCCAGCCAGCGCCGCCGAAGCGACCGACTTCTCCGCCACCCAGCGCAGCGAGAAGACCGACTTCACCG
ACAGCCAGATCGCCGACGGTTTCTTCCGCACCGCGTTCGGCGCCGAATTCCACATGGCGGGGCGGGTCGACCGGATCCGC
AAATACGAGGCCCCGGTGCGGGTCTATGCCGAAGGCGACGGCCAGGCGCATCGCCGCGCCGAACTCGCCCGGATCGTCTC
GGACATCGCCGGCCGAGTCGAGCATCTCGACATCGCGATGACCGACAATCCGGACGAGGCCAACGTCACCGTCCACCTCG
TCCGCGACCGCAACCTCGGCAAGACCATCGCGACGTTCTACGGCGAGGAACGCGCCCGCGAGATCCGCGAGAGCCTCGAT
CCGCAGTGCCTGTCCGGCTTCCGCAAGAACGACCGCTTCGAGATCGAGCGCTCCGACGTCATCCTCACCATCGACAACGG
CGACTTCGTTTTCCGCGACTGCGCCTATGAGGAACTGCTGCAGTCGCTCGGCCCGATCAACGACACCGACAACGTGCCGT
GGACGATGTTCAACGACGACGTCCAGAAGGGCTATTTCGACGTCTACGATCAGTACCTGTTGAACATCCTGTACCACCCG
GCGATCCGCCCCGGCATGACCGTGCCGGAAGTCAAAGCCGTGCTCCCCCAGGTCCTCGCCGACGTGCGCAGCTATGTCGC
GAAGGTGAACAGGCTGACGCGTTAA

Upstream 100 bases:

>100_bases
GGGTCGGCACCGTCGTGGTGGTGAAAAACTAAGGCAGCCGGGCGATCGGCCGCGTGCACAGGCGGCTGCGGCCGAATTGC
CGGTTGTGCCCGGGACCGGA

Downstream 100 bases:

>100_bases
GGCGTCGTCGGACGCTTCGCCAACACGTGCAAAAAGATCGGAGCGACCCGGGTGTCCGCGACGATCGGTTCGGCCGCCGC
AACCTCTTCCGAGGCCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRQPFAMHCGARHLRPALAAVTAAITLLATAPASAAEATDFSATQRSEKTDFTDSQIADGFFRTAFGAEFHMAGRVDRIR
KYEAPVRVYAEGDGQAHRRAELARIVSDIAGRVEHLDIAMTDNPDEANVTVHLVRDRNLGKTIATFYGEERAREIRESLD
PQCLSGFRKNDRFEIERSDVILTIDNGDFVFRDCAYEELLQSLGPINDTDNVPWTMFNDDVQKGYFDVYDQYLLNILYHP
AIRPGMTVPEVKAVLPQVLADVRSYVAKVNRLTR

Sequences:

>Translated_274_residues
MRQPFAMHCGARHLRPALAAVTAAITLLATAPASAAEATDFSATQRSEKTDFTDSQIADGFFRTAFGAEFHMAGRVDRIR
KYEAPVRVYAEGDGQAHRRAELARIVSDIAGRVEHLDIAMTDNPDEANVTVHLVRDRNLGKTIATFYGEERAREIRESLD
PQCLSGFRKNDRFEIERSDVILTIDNGDFVFRDCAYEELLQSLGPINDTDNVPWTMFNDDVQKGYFDVYDQYLLNILYHP
AIRPGMTVPEVKAVLPQVLADVRSYVAKVNRLTR
>Mature_274_residues
MRQPFAMHCGARHLRPALAAVTAAITLLATAPASAAEATDFSATQRSEKTDFTDSQIADGFFRTAFGAEFHMAGRVDRIR
KYEAPVRVYAEGDGQAHRRAELARIVSDIAGRVEHLDIAMTDNPDEANVTVHLVRDRNLGKTIATFYGEERAREIRESLD
PQCLSGFRKNDRFEIERSDVILTIDNGDFVFRDCAYEELLQSLGPINDTDNVPWTMFNDDVQKGYFDVYDQYLLNILYHP
AIRPGMTVPEVKAVLPQVLADVRSYVAKVNRLTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30828; Mature: 30828

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQPFAMHCGARHLRPALAAVTAAITLLATAPASAAEATDFSATQRSEKTDFTDSQIADG
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCCCCCHHHHHHH
FFRTAFGAEFHMAGRVDRIRKYEAPVRVYAEGDGQAHRRAELARIVSDIAGRVEHLDIAM
HHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEE
TDNPDEANVTVHLVRDRNLGKTIATFYGEERAREIRESLDPQCLSGFRKNDRFEIERSDV
CCCCCCCCEEEEEEECCCCCHHHHHHHCHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCE
ILTIDNGDFVFRDCAYEELLQSLGPINDTDNVPWTMFNDDVQKGYFDVYDQYLLNILYHP
EEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCC
AIRPGMTVPEVKAVLPQVLADVRSYVAKVNRLTR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRQPFAMHCGARHLRPALAAVTAAITLLATAPASAAEATDFSATQRSEKTDFTDSQIADG
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHCCCCCCCCHHHHHHH
FFRTAFGAEFHMAGRVDRIRKYEAPVRVYAEGDGQAHRRAELARIVSDIAGRVEHLDIAM
HHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEEEEE
TDNPDEANVTVHLVRDRNLGKTIATFYGEERAREIRESLDPQCLSGFRKNDRFEIERSDV
CCCCCCCCEEEEEEECCCCCHHHHHHHCHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCE
ILTIDNGDFVFRDCAYEELLQSLGPINDTDNVPWTMFNDDVQKGYFDVYDQYLLNILYHP
EEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCC
AIRPGMTVPEVKAVLPQVLADVRSYVAKVNRLTR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA