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The map label for this gene is metQ [H]

Identifier: 192290013

GI number: 192290013

Start: 1729094

End: 1729879

Strand: Reverse

Name: metQ [H]

Synonym: Rpal_1614

Alternate gene names: 192290013

Gene position: 1729879-1729094 (Counterclockwise)

Preceding gene: 192290014

Following gene: 192290012

Centisome position: 30.12

GC content: 61.45

Gene sequence:

>786_bases
ATGGCACGTAAACTCGTTTTCGCTGCGGCCGCCTTCGCCGCGCTCACCGCAGCGGCTCCGGCCTTCAGCACCGAAGTGGT
CCGGATCGGCACCACCGCCGGTCCCTACGCCGAGATTCTGCGCTACGCCGGCGATCTCGCCGCCAAGCAGGGCATCGAGG
TGAAGATCACCGAATTCACCGACTACACCGTGCCCAATGCGGCGTTGGCGCAGGACGATCTCGACATCAACAACTTCCAG
CACCAGCCCTATCTCGACAACCAGGTGGCGCAGCGCGGCTATGACATCGTCTCGATCGCCAAGAGCATCATCGTGCCGAT
TGGGATCTATTCGAACAAGGTCAAGACGCTGACCGACATCAAGGACGGCGCCAGCGCCGCGATCCCGAACGATCCGTCCA
ACGGCGCCCGTGCGCTGCAACTTTTCGAGAAGGCAGGGTTGATCAAGCTGAAGCCGGGGATCGGCATCAAGGCGACGATC
GCCGACATCGCCGAGAATCCCAAGCATCTCAAGATCGTCGAGCTTGACGCCGCGCAGCTGCCGCGCTCGCTGAACGATCT
CGATTTTTCGGCGGTCAATCTCAACTACGCGCTGAGCGCCGGGCTCGATCCGAAGAGTGCGCTGCTGCTCGAAGGCGCCG
ACACGAACTGGAACCTGGTGTTCGCAGTGCGCGCCAAGAACAAGGACAACGCCACGCTGAAGAAGTTCGTCGAGATCTAT
CGCTCGCCGGAGGTGAAGGCCTTCACCGAGAAGCGCTTCAACGGTACCATTCTCACCACCTGGTGA

Upstream 100 bases:

>100_bases
GCCTCGTCGTGGATTTCGAAATGGCCGCCGGATCAGGCGGCCGATAGTTTCCCCGCAAACCACGACCACCGAGATGGTCA
CGTATCGAGGTTGAATTCCC

Downstream 100 bases:

>100_bases
GACCGGCCGCCGCGACGACAATCAACACCATTTCAGTCATCGACAGCGCGACCGGCCGCCCAGCGGCCGGTCGTCGGCAT
TCAGGAACACTGCACATGAC

Product: NLPA lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MARKLVFAAAAFAALTAAAPAFSTEVVRIGTTAGPYAEILRYAGDLAAKQGIEVKITEFTDYTVPNAALAQDDLDINNFQ
HQPYLDNQVAQRGYDIVSIAKSIIVPIGIYSNKVKTLTDIKDGASAAIPNDPSNGARALQLFEKAGLIKLKPGIGIKATI
ADIAENPKHLKIVELDAAQLPRSLNDLDFSAVNLNYALSAGLDPKSALLLEGADTNWNLVFAVRAKNKDNATLKKFVEIY
RSPEVKAFTEKRFNGTILTTW

Sequences:

>Translated_261_residues
MARKLVFAAAAFAALTAAAPAFSTEVVRIGTTAGPYAEILRYAGDLAAKQGIEVKITEFTDYTVPNAALAQDDLDINNFQ
HQPYLDNQVAQRGYDIVSIAKSIIVPIGIYSNKVKTLTDIKDGASAAIPNDPSNGARALQLFEKAGLIKLKPGIGIKATI
ADIAENPKHLKIVELDAAQLPRSLNDLDFSAVNLNYALSAGLDPKSALLLEGADTNWNLVFAVRAKNKDNATLKKFVEIY
RSPEVKAFTEKRFNGTILTTW
>Mature_260_residues
ARKLVFAAAAFAALTAAAPAFSTEVVRIGTTAGPYAEILRYAGDLAAKQGIEVKITEFTDYTVPNAALAQDDLDINNFQH
QPYLDNQVAQRGYDIVSIAKSIIVPIGIYSNKVKTLTDIKDGASAAIPNDPSNGARALQLFEKAGLIKLKPGIGIKATIA
DIAENPKHLKIVELDAAQLPRSLNDLDFSAVNLNYALSAGLDPKSALLLEGADTNWNLVFAVRAKNKDNATLKKFVEIYR
SPEVKAFTEKRFNGTILTTW

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=239, Percent_Identity=42.2594142259414, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1790093, Length=239, Percent_Identity=36.8200836820084, Blast_Score=171, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 28176; Mature: 28045

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKLVFAAAAFAALTAAAPAFSTEVVRIGTTAGPYAEILRYAGDLAAKQGIEVKITEFT
CCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEC
DYTVPNAALAQDDLDINNFQHQPYLDNQVAQRGYDIVSIAKSIIVPIGIYSNKVKTLTDI
CCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHEEEEECCCCCCEEHHC
KDGASAAIPNDPSNGARALQLFEKAGLIKLKPGIGIKATIADIAENPKHLKIVELDAAQL
CCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEEHHHHHCCCCEEEEEEECHHHC
PRSLNDLDFSAVNLNYALSAGLDPKSALLLEGADTNWNLVFAVRAKNKDNATLKKFVEIY
CCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHH
RSPEVKAFTEKRFNGTILTTW
CCCCCEEHHHHCCCCEEEEEC
>Mature Secondary Structure 
ARKLVFAAAAFAALTAAAPAFSTEVVRIGTTAGPYAEILRYAGDLAAKQGIEVKITEFT
CCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEEC
DYTVPNAALAQDDLDINNFQHQPYLDNQVAQRGYDIVSIAKSIIVPIGIYSNKVKTLTDI
CCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHEEEEECCCCCCEEHHC
KDGASAAIPNDPSNGARALQLFEKAGLIKLKPGIGIKATIADIAENPKHLKIVELDAAQL
CCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCCCCEEEEHHHHHCCCCEEEEEEECHHHC
PRSLNDLDFSAVNLNYALSAGLDPKSALLLEGADTNWNLVFAVRAKNKDNATLKKFVEIY
CCCCCCCCEEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHH
RSPEVKAFTEKRFNGTILTTW
CCCCCEEHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]