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The map label for this gene is rhaR [C]

Identifier: 192289928

GI number: 192289928

Start: 1605203

End: 1606108

Strand: Reverse

Name: rhaR [C]

Synonym: Rpal_1524

Alternate gene names: 192289928

Gene position: 1606108-1605203 (Counterclockwise)

Preceding gene: 192289929

Following gene: 192289927

Centisome position: 27.96

GC content: 64.79

Gene sequence:

>906_bases
ATGAGCAGCGCCGAGTTTTACGGCACACGGCTGGACGAGCATTGGGGCGGGCAGTGTTCGGTCACATCACTGCTGGTGAA
GGGAAAGGCGCAAAGCGACGTCACGGTGGCCCGCTTGATCGGAGGCCCCGGGTTCGGAATGGTCGCACCGGTGCCGCCCG
AAGAGGGCTACGCGCTGACGATCGAATTGATCGACTATCAGAAGGGTGAGCTCTGGCTCGGCGGCCGAACCACCCCGCAG
ACCGATCTGCTCAGGAATCACAGCGTCTTCTTCGACCTTCGCAACGGCGTCGAAGCCAAGCTGGAGGATCCGTTCGATTT
CCTTCATTTCCATATTCCGCGACAGTACTTCTCCGACCTTGCCGCCGCCAGCGGCGTGAGAGCGATCGACGAACTCCGCG
TGCAGAGCGGCCAGGGCTTCTTCGACCCGACGATGCTGCATCTGGGGATGGCGATGCTTCCCGCGCTCGAGCGCCCCACG
GAGGCCAATCGGCTCTTCCTCGATCACACGATGCTGGCGCTCTGTGCCCACATTGCCGGCACATACGGCGTCGCAATCGA
GCCGCGGGTCCTGGCGAAGGGGCTGTCGGGCTGGCGGCTGCGGCGAGCCAAGGACCTGATCGCGAGCCGTCTGGACGGCG
ACGTTTCGATTGCCGAGATCGCGGCCGAATGCGGGCTGACGCCGAGCTATTTCGCGCGGCAGTTTGCCGAAGCCACCGGG
ACGACACCGCATCGCTGGCTGCTGAAGATGCGCGTCGAAACCGCCAAGCGCCTGATCGTCGAAGGCAGACTTTCGCTCGC
CGAGATCGCGGCAGCTTGCGGCTTCGCCGACCAGAGTCATTTCACACGGGTCTTCGCCCGCGAGACCGGCGCGACGCCGA
GGGTGTGGCGCGACCATCTGCGGTGA

Upstream 100 bases:

>100_bases
AGCACCGCTCATCCTGCACTCCGGCCGACGAACCGCCGAGTAACCCTCAGCGTGTCGACAGGCGGCCCCGCCGGGCCGCC
AAACCCAGCAAGGAACGCGG

Downstream 100 bases:

>100_bases
GAAAGCGTCACGCAGTTCCCAATCTGCACAACCAGATTCGCATTTCGTTCAAGACGCAAGGTTCTGTGCCGAGCATCATC
ACGATGGAGGAAAGGCTGCC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein; AraC-Family Transcriptional Regulator; Transcriptional Regulator AraC; AraC Family Regulatory Protein; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulatory Protein; AraC/XylS Family Transcription Factor; AraC Family Transcription Regulator Protein; Two Component System Response Regulator; Regulator; Two Component Transcriptional Regulator; Transcriptional Regulator AraC/XylS Family; Proline Utilization Regulator; Transcription Regulator Protein; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; L-Rhamnose Operon Transcriptional Activator RhaR; Helix-Turn-Helix AraC Type; Transcriptional Regulator Protein AraC Family; AraC Family Helix-Turn-Helix Transcriptional Regulator; Transcription Regulator; Xyls/AraC-Type Transcriptional Activator

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSSAEFYGTRLDEHWGGQCSVTSLLVKGKAQSDVTVARLIGGPGFGMVAPVPPEEGYALTIELIDYQKGELWLGGRTTPQ
TDLLRNHSVFFDLRNGVEAKLEDPFDFLHFHIPRQYFSDLAAASGVRAIDELRVQSGQGFFDPTMLHLGMAMLPALERPT
EANRLFLDHTMLALCAHIAGTYGVAIEPRVLAKGLSGWRLRRAKDLIASRLDGDVSIAEIAAECGLTPSYFARQFAEATG
TTPHRWLLKMRVETAKRLIVEGRLSLAEIAAACGFADQSHFTRVFARETGATPRVWRDHLR

Sequences:

>Translated_301_residues
MSSAEFYGTRLDEHWGGQCSVTSLLVKGKAQSDVTVARLIGGPGFGMVAPVPPEEGYALTIELIDYQKGELWLGGRTTPQ
TDLLRNHSVFFDLRNGVEAKLEDPFDFLHFHIPRQYFSDLAAASGVRAIDELRVQSGQGFFDPTMLHLGMAMLPALERPT
EANRLFLDHTMLALCAHIAGTYGVAIEPRVLAKGLSGWRLRRAKDLIASRLDGDVSIAEIAAECGLTPSYFARQFAEATG
TTPHRWLLKMRVETAKRLIVEGRLSLAEIAAACGFADQSHFTRVFARETGATPRVWRDHLR
>Mature_300_residues
SSAEFYGTRLDEHWGGQCSVTSLLVKGKAQSDVTVARLIGGPGFGMVAPVPPEEGYALTIELIDYQKGELWLGGRTTPQT
DLLRNHSVFFDLRNGVEAKLEDPFDFLHFHIPRQYFSDLAAASGVRAIDELRVQSGQGFFDPTMLHLGMAMLPALERPTE
ANRLFLDHTMLALCAHIAGTYGVAIEPRVLAKGLSGWRLRRAKDLIASRLDGDVSIAEIAAECGLTPSYFARQFAEATGT
TPHRWLLKMRVETAKRLIVEGRLSLAEIAAACGFADQSHFTRVFARETGATPRVWRDHLR

Specific function: Activator Of The L-Rhamnose Operon. Rhar Putatively Autoregulates Its Synthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI171474011, Length=91, Percent_Identity=34.0659340659341, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33253; Mature: 33122

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAEFYGTRLDEHWGGQCSVTSLLVKGKAQSDVTVARLIGGPGFGMVAPVPPEEGYALT
CCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
IELIDYQKGELWLGGRTTPQTDLLRNHSVFFDLRNGVEAKLEDPFDFLHFHIPRQYFSDL
EEEEECCCCCEEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHH
AAASGVRAIDELRVQSGQGFFDPTMLHLGMAMLPALERPTEANRLFLDHTMLALCAHIAG
HHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
TYGVAIEPRVLAKGLSGWRLRRAKDLIASRLDGDVSIAEIAAECGLTPSYFARQFAEATG
CCCCEECHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC
TTPHRWLLKMRVETAKRLIVEGRLSLAEIAAACGFADQSHFTRVFARETGATPRVWRDHL
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHC
R
C
>Mature Secondary Structure 
SSAEFYGTRLDEHWGGQCSVTSLLVKGKAQSDVTVARLIGGPGFGMVAPVPPEEGYALT
CCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEE
IELIDYQKGELWLGGRTTPQTDLLRNHSVFFDLRNGVEAKLEDPFDFLHFHIPRQYFSDL
EEEEECCCCCEEECCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCHHHHHHH
AAASGVRAIDELRVQSGQGFFDPTMLHLGMAMLPALERPTEANRLFLDHTMLALCAHIAG
HHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
TYGVAIEPRVLAKGLSGWRLRRAKDLIASRLDGDVSIAEIAAECGLTPSYFARQFAEATG
CCCCEECHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCC
TTPHRWLLKMRVETAKRLIVEGRLSLAEIAAACGFADQSHFTRVFARETGATPRVWRDHL
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA