| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is menB [C]
Identifier: 192289841
GI number: 192289841
Start: 1511889
End: 1512737
Strand: Reverse
Name: menB [C]
Synonym: Rpal_1431
Alternate gene names: 192289841
Gene position: 1512737-1511889 (Counterclockwise)
Preceding gene: 192289845
Following gene: 192289840
Centisome position: 26.34
GC content: 63.96
Gene sequence:
>849_bases ATGAGCTCCTACGAGACGATCCTGGTCGAGCGACCGGATCCGGCGGTCGCACGAATCGTGATGAACCGTCCCGACGCGCG CAACGCGCAAAATCTGCAGATGACCTACGACCTCAACGCCGCGTTCGACGACGCGGTGCAGGACGACAGCGTCAAGGTGA TTATCCTGGCCGGTGCCGGTCCGCACTTCTCCGCCGGCCACGATCTGCGCGCGACCACCAAGAATGAAGCCGGTATCGAC TTTCCGCCGGTCGGCGCCTGGGGCGGGTTTCGCGAGCCGGGCGCGCACGGACGGATGGCGCGCGAGCAGGAGATCTATCT GCAGATCACCCGGCGGTGGCGCAATCTCGCCAAGCCGACCATCGCCGAGGTGCACGGCAAGTGCATCGCCGGCGGGCTGA TGCTGGCCTGGGCCTGCGATCTGATCATCGCCGCCGACTCGGCCGAGTTCTGCGATCCGGTGGTGACAATGGGCGTGTGC GGCGTCGAGTGGTTCGTGCATCCCTGGGAGCTCGGCCCACGCAAGGCCAAGGAGTTGCTCTTCACCGCCGACAGCTGGAG CGCGCAAGAAGCCCATCAGCTCGGCATGGTCAATCACGTGGTGCCTGCCACCGAACTATCCGCTTTCGCCATGGCGCTTG CGCAACGTATCGCCGCCAAGCCGAGCTTTGCACTGAAGATGACCAAGGAAGCGGTCAACCGCTCGGTGGATATCCAGGGG CAGCCGGCCGCGATCGATCAGGCGTTCGCGCTGCATCAGCTTTGTCACGCTCACAATCTGCAGGAGTTTGGAATGATCGT CGATCCGTCGGGACTGCATCCGTCGGTGCGCAAGCAAGTAAAGGTGTAA
Upstream 100 bases:
>100_bases GAGCCGCAGAGATGCCGTTTGCAGTCGCGCGCGCGACCTGCCAAACTCCGCGAAACACAACCGGCGCCACAAGCCGAGAC AATAAGAAACGGGAGGATGG
Downstream 100 bases:
>100_bases GCGATGGATCTCACGCCCAGTGACGAACAACGGCTGCTGCGCGAAAGCGCCGACCGCTTCATCGCCGAGACCTACACGAC GAAGCTGCGCGAGCAGAACG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSSYETILVERPDPAVARIVMNRPDARNAQNLQMTYDLNAAFDDAVQDDSVKVIILAGAGPHFSAGHDLRATTKNEAGID FPPVGAWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPTIAEVHGKCIAGGLMLAWACDLIIAADSAEFCDPVVTMGVC GVEWFVHPWELGPRKAKELLFTADSWSAQEAHQLGMVNHVVPATELSAFAMALAQRIAAKPSFALKMTKEAVNRSVDIQG QPAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV
Sequences:
>Translated_282_residues MSSYETILVERPDPAVARIVMNRPDARNAQNLQMTYDLNAAFDDAVQDDSVKVIILAGAGPHFSAGHDLRATTKNEAGID FPPVGAWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPTIAEVHGKCIAGGLMLAWACDLIIAADSAEFCDPVVTMGVC GVEWFVHPWELGPRKAKELLFTADSWSAQEAHQLGMVNHVVPATELSAFAMALAQRIAAKPSFALKMTKEAVNRSVDIQG QPAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV >Mature_281_residues SSYETILVERPDPAVARIVMNRPDARNAQNLQMTYDLNAAFDDAVQDDSVKVIILAGAGPHFSAGHDLRATTKNEAGIDF PPVGAWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPTIAEVHGKCIAGGLMLAWACDLIIAADSAEFCDPVVTMGVCG VEWFVHPWELGPRKAKELLFTADSWSAQEAHQLGMVNHVVPATELSAFAMALAQRIAAKPSFALKMTKEAVNRSVDIQGQ PAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI31542718, Length=216, Percent_Identity=32.8703703703704, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI194097323, Length=247, Percent_Identity=28.7449392712551, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI45643119, Length=235, Percent_Identity=28.0851063829787, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI260275230, Length=235, Percent_Identity=28.0851063829787, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI260274832, Length=235, Percent_Identity=28.0851063829787, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI70995211, Length=234, Percent_Identity=31.6239316239316, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1788597, Length=241, Percent_Identity=31.1203319502075, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1787660, Length=224, Percent_Identity=32.1428571428571, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI221142681, Length=222, Percent_Identity=34.2342342342342, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1787659, Length=242, Percent_Identity=27.6859504132231, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI87082183, Length=220, Percent_Identity=31.3636363636364, Blast_Score=82, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17554946, Length=241, Percent_Identity=30.2904564315353, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI25145438, Length=223, Percent_Identity=29.5964125560538, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535521, Length=218, Percent_Identity=27.9816513761468, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17540714, Length=267, Percent_Identity=26.9662921348315, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17549921, Length=249, Percent_Identity=26.5060240963855, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536985, Length=236, Percent_Identity=27.1186440677966, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17560910, Length=241, Percent_Identity=26.1410788381743, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17540306, Length=209, Percent_Identity=28.2296650717703, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17534483, Length=242, Percent_Identity=26.4462809917355, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI20129971, Length=229, Percent_Identity=29.2576419213974, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI24653477, Length=229, Percent_Identity=29.2576419213974, Blast_Score=99, Evalue=4e-21, Organism=Drosophila melanogaster, GI19920382, Length=247, Percent_Identity=29.9595141700405, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24653139, Length=266, Percent_Identity=29.3233082706767, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI21357171, Length=244, Percent_Identity=29.9180327868852, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI24654903, Length=232, Percent_Identity=24.5689655172414, Blast_Score=72, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 30795; Mature: 30663
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYETILVERPDPAVARIVMNRPDARNAQNLQMTYDLNAAFDDAVQDDSVKVIILAGAG CCCCCEEEEECCCHHHHHHEECCCCCCCCCCEEEEEECCCHHHCCCCCCCEEEEEEECCC PHFSAGHDLRATTKNEAGIDFPPVGAWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPT CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH IAEVHGKCIAGGLMLAWACDLIIAADSAEFCDPVVTMGVCGVEWFVHPWELGPRKAKELL HHHHCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHE FTADSWSAQEAHQLGMVNHVVPATELSAFAMALAQRIAAKPSFALKMTKEAVNRSVDIQG EECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCC QPAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV CCHHHHHHHHHHHHHHHCCHHHCCEEECCCCCCHHHHHHCCC >Mature Secondary Structure SSYETILVERPDPAVARIVMNRPDARNAQNLQMTYDLNAAFDDAVQDDSVKVIILAGAG CCCCEEEEECCCHHHHHHEECCCCCCCCCCEEEEEECCCHHHCCCCCCCEEEEEEECCC PHFSAGHDLRATTKNEAGIDFPPVGAWGGFREPGAHGRMAREQEIYLQITRRWRNLAKPT CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH IAEVHGKCIAGGLMLAWACDLIIAADSAEFCDPVVTMGVCGVEWFVHPWELGPRKAKELL HHHHCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHE FTADSWSAQEAHQLGMVNHVVPATELSAFAMALAQRIAAKPSFALKMTKEAVNRSVDIQG EECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEECCCC QPAAIDQAFALHQLCHAHNLQEFGMIVDPSGLHPSVRKQVKV CCHHHHHHHHHHHHHHHCCHHHCCEEECCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA