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The map label for this gene is yfhC [C]

Identifier: 192289765

GI number: 192289765

Start: 1427530

End: 1427976

Strand: Reverse

Name: yfhC [C]

Synonym: Rpal_1355

Alternate gene names: 192289765

Gene position: 1427976-1427530 (Counterclockwise)

Preceding gene: 192289768

Following gene: 192289762

Centisome position: 24.86

GC content: 68.68

Gene sequence:

>447_bases
ATGACGGCTTCCACTTTCATGGAATTGGCGCTGGCTGAGGCTGCTGCGGCGGCCGAAGCCGGCGAGGTGCCGATCGGCTG
CGTGATCGTCCGCGACGGCGTGGTGATCGCCAAGGCCGGCAACCGCACCCTGACCGACCGCGATCCCACCGCCCACGCCG
AGCTGCTGGCGATCCGGGAAGCCGCGGCGAAGCTCGGCAGCGAGCGGCTGGTCGATTGCGACCTCTACGTCACGCTGGAG
CCGTGCACGATGTGCGCCGGTGCGATTTCGTTCGCCCGGATCAGGCGGCTGTATTTCGGCGCGTTCGATCCCAAGGGCGG
CGCGGTGGAATCCGGCGTACGGTTCTACGGCCAGCCGACCTGCCATCACGCGCCCGAAGTGTATTCCGCCGTCGGCGAGC
GCGAGGCCGCGACCATGCTGCGGGAATTCTTCAAGGCGCGGCGCTGA

Upstream 100 bases:

>100_bases
CTCCGATCGAAACGCGCATGGTCACGCACAACAGCCATCCACTTTTGCTGAAGCCGGTCTCCTAGCAGAGTTTTCGGGGC
GAGACGAGCCAAGAACGACG

Downstream 100 bases:

>100_bases
AGAACCTTACCAGCGCCTCGGCGGTCTGATCCGGCGCTTCCTCGGGAAGGAAATGCCCGGACTCGATCGGCGCGCCCTGC
ACGTCGGACGCCCACTTTCG

Product: zinc-binding CMP/dCMP deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTASTFMELALAEAAAAAEAGEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIREAAAKLGSERLVDCDLYVTLE
PCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHHAPEVYSAVGEREAATMLREFFKARR

Sequences:

>Translated_148_residues
MTASTFMELALAEAAAAAEAGEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIREAAAKLGSERLVDCDLYVTLE
PCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHHAPEVYSAVGEREAATMLREFFKARR
>Mature_147_residues
TASTFMELALAEAAAAAEAGEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIREAAAKLGSERLVDCDLYVTLEP
CTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPTCHHAPEVYSAVGEREAATMLREFFKARR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=148, Percent_Identity=31.0810810810811, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI145693172, Length=143, Percent_Identity=42.6573426573427, Blast_Score=119, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17554608, Length=97, Percent_Identity=44.3298969072165, Blast_Score=88, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17541138, Length=148, Percent_Identity=33.1081081081081, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17555996, Length=97, Percent_Identity=42.2680412371134, Blast_Score=71, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322425, Length=161, Percent_Identity=32.9192546583851, Blast_Score=68, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21355527, Length=149, Percent_Identity=34.2281879194631, Blast_Score=76, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 15853; Mature: 15722

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASTFMELALAEAAAAAEAGEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIRE
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHH
AAAKLGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPT
HHHHCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHCCCCC
CHHAPEVYSAVGEREAATMLREFFKARR
CCCCHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TASTFMELALAEAAAAAEAGEVPIGCVIVRDGVVIAKAGNRTLTDRDPTAHAELLAIRE
CHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHH
AAAKLGSERLVDCDLYVTLEPCTMCAGAISFARIRRLYFGAFDPKGGAVESGVRFYGQPT
HHHHCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHCCCCC
CHHAPEVYSAVGEREAATMLREFFKARR
CCCCHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA