| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
Click here to switch to the map view.
The map label for this gene is nadA [H]
Identifier: 192289657
GI number: 192289657
Start: 1323755
End: 1324867
Strand: Reverse
Name: nadA [H]
Synonym: Rpal_1247
Alternate gene names: 192289657
Gene position: 1324867-1323755 (Counterclockwise)
Preceding gene: 192289660
Following gene: 192289656
Centisome position: 23.07
GC content: 63.79
Gene sequence:
>1113_bases ATGCCGCTTGCTGAACTCTACGGTCCGGAGAATTTCGGCCTGCCGCCGCATGCGCGCCAAGGATCGCTTCCGCGCGCGCC GCTGAGTGCCACTGAACGCGCCCGCGCGCTCCCGATGCCGTCCTTGGAATGGACGCCGGAGGTCGAGGCCGCGACCGCGC ACCTGTACGAGAAGGTGCAGACCGTCATTCCGCCGGTCGAGTGGCCGTTCATGGCGCCCTACGTCAAAGCGATCAACGAG CTGAAGCGCGAGCGCGACGCCGTGATCCTGGCGCACAACTACCAGACGCCGGAAATCTTCCACTGCGTCGCCGACATCGT CGGCGACTCGCTGCAACTCGCGATCGAAGCCACCAAGGTGAAAGCTTCGACCATCGTGCAGTGTGGCGTGCACTTCATGG CCGAGACGTCGAAGATCCTGAATCCGGAGAAGCGCGTGCTGATCCCGGATTCCCGCGCTGGCTGCTCGCTCGCCTCTTCC ATCACCGGTGCCGACGTTCGGCTGCTGCGCGAGAAATTCCCCGGCGTGCCGGTGGTCGCTTATGTCAACACCTCGGCCGA CGTGAAGGCTGAGGTCGATATCTGCTGCACCTCGTCGAACGCCGTGCAGGTGGTCGAAAGCCTCGGCGTCGACCGCGTCA TCATGGTGCCGGACCAGTATCTGGCGAAGTACGTCGCCTCCCAGACCAAGGTGAAGATCATCGCCTGGAAGGGCGCCTGC GAGGTCCACGAGCGCTTCACCGGCGACGAGCTGCGCGTCTATCGCGAGGCAGATCCGAACGTGAAGATCATCGCGCATCC GGAGTGTCCGCCGGATGTACTGGCCGAAGCCGACTTCACCGGCTCGACCGCGCACATGATCAACTGGGTCAAGACCCAGC ATCCGAAGCGCGTGGTGATGATCACCGAGTGCTCGATGGCCGACAACGTCCAGGCCGAGCTGCGCGACGTCGAAATGGTG CGGCCGTGCAATCTATGCCCGCACATGAAGCGGATCACGCTGGCGAAGATCCTCGACAGTCTGGTGTATCTGCGTGAGGA AGTGACGGTCGATCCCGCCATCATCGCGCCGGCCCGGCGCTCGGTGGAGCGGATGATCAACCTGAACAACTGA
Upstream 100 bases:
>100_bases GCAGCGGTTGGAAAGTTGCCGGCCCATCGTGGCCGGATTTCTCAAACCCAGCATATGCTCAAACTGAGTATATATTGGAG CGCGGTACAAGGAGGCGTCG
Downstream 100 bases:
>100_bases GCCTCAGGGCTCGCGACGAATGGCGGCGTCCGTGCCGCCATCGCTGTGCATCGAAGGCGTTCGCGGACAATCGCGTGAGA GTTGGATCGCCGCATGAGCA
Product: quinolinate synthetase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MPLAELYGPENFGLPPHARQGSLPRAPLSATERARALPMPSLEWTPEVEAATAHLYEKVQTVIPPVEWPFMAPYVKAINE LKRERDAVILAHNYQTPEIFHCVADIVGDSLQLAIEATKVKASTIVQCGVHFMAETSKILNPEKRVLIPDSRAGCSLASS ITGADVRLLREKFPGVPVVAYVNTSADVKAEVDICCTSSNAVQVVESLGVDRVIMVPDQYLAKYVASQTKVKIIAWKGAC EVHERFTGDELRVYREADPNVKIIAHPECPPDVLAEADFTGSTAHMINWVKTQHPKRVVMITECSMADNVQAELRDVEMV RPCNLCPHMKRITLAKILDSLVYLREEVTVDPAIIAPARRSVERMINLNN
Sequences:
>Translated_370_residues MPLAELYGPENFGLPPHARQGSLPRAPLSATERARALPMPSLEWTPEVEAATAHLYEKVQTVIPPVEWPFMAPYVKAINE LKRERDAVILAHNYQTPEIFHCVADIVGDSLQLAIEATKVKASTIVQCGVHFMAETSKILNPEKRVLIPDSRAGCSLASS ITGADVRLLREKFPGVPVVAYVNTSADVKAEVDICCTSSNAVQVVESLGVDRVIMVPDQYLAKYVASQTKVKIIAWKGAC EVHERFTGDELRVYREADPNVKIIAHPECPPDVLAEADFTGSTAHMINWVKTQHPKRVVMITECSMADNVQAELRDVEMV RPCNLCPHMKRITLAKILDSLVYLREEVTVDPAIIAPARRSVERMINLNN >Mature_369_residues PLAELYGPENFGLPPHARQGSLPRAPLSATERARALPMPSLEWTPEVEAATAHLYEKVQTVIPPVEWPFMAPYVKAINEL KRERDAVILAHNYQTPEIFHCVADIVGDSLQLAIEATKVKASTIVQCGVHFMAETSKILNPEKRVLIPDSRAGCSLASSI TGADVRLLREKFPGVPVVAYVNTSADVKAEVDICCTSSNAVQVVESLGVDRVIMVPDQYLAKYVASQTKVKIIAWKGACE VHERFTGDELRVYREADPNVKIIAHPECPPDVLAEADFTGSTAHMINWVKTQHPKRVVMITECSMADNVQAELRDVEMVR PCNLCPHMKRITLAKILDSLVYLREEVTVDPAIIAPARRSVERMINLNN
Specific function: Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate [H]
COG id: COG0379
COG function: function code H; Quinolinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the quinolinate synthase A family. Type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786964, Length=316, Percent_Identity=35.7594936708861, Blast_Score=168, Evalue=4e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003473 - InterPro: IPR023066 [H]
Pfam domain/function: PF02445 NadA [H]
EC number: =2.5.1.72 [H]
Molecular weight: Translated: 40975; Mature: 40844
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLAELYGPENFGLPPHARQGSLPRAPLSATERARALPMPSLEWTPEVEAATAHLYEKVQ CCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TVIPPVEWPFMAPYVKAINELKRERDAVILAHNYQTPEIFHCVADIVGDSLQLAIEATKV HHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEHHH KASTIVQCGVHFMAETSKILNPEKRVLIPDSRAGCSLASSITGADVRLLREKFPGVPVVA HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEE YVNTSADVKAEVDICCTSSNAVQVVESLGVDRVIMVPDQYLAKYVASQTKVKIIAWKGAC EECCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEEEECCCH EVHERFTGDELRVYREADPNVKIIAHPECPPDVLAEADFTGSTAHMINWVKTQHPKRVVM HHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEE ITECSMADNVQAELRDVEMVRPCNLCPHMKRITLAKILDSLVYLREEVTVDPAIIAPARR EEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHH SVERMINLNN HHHHHHCCCC >Mature Secondary Structure PLAELYGPENFGLPPHARQGSLPRAPLSATERARALPMPSLEWTPEVEAATAHLYEKVQ CCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH TVIPPVEWPFMAPYVKAINELKRERDAVILAHNYQTPEIFHCVADIVGDSLQLAIEATKV HHCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEHHH KASTIVQCGVHFMAETSKILNPEKRVLIPDSRAGCSLASSITGADVRLLREKFPGVPVVA HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEE YVNTSADVKAEVDICCTSSNAVQVVESLGVDRVIMVPDQYLAKYVASQTKVKIIAWKGAC EECCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHCCCEEEEEEECCCH EVHERFTGDELRVYREADPNVKIIAHPECPPDVLAEADFTGSTAHMINWVKTQHPKRVVM HHHHHCCCCCEEEEECCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCEEEE ITECSMADNVQAELRDVEMVRPCNLCPHMKRITLAKILDSLVYLREEVTVDPAIIAPARR EEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHH SVERMINLNN HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]