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The map label for this gene is 192289556

Identifier: 192289556

GI number: 192289556

Start: 1214422

End: 1215051

Strand: Reverse

Name: 192289556

Synonym: Rpal_1145

Alternate gene names: NA

Gene position: 1215051-1214422 (Counterclockwise)

Preceding gene: 192289584

Following gene: 192289555

Centisome position: 21.15

GC content: 63.97

Gene sequence:

>630_bases
ATGATCTATTCTCCCGCGATGGCCCAATCCACTTTCGCCTTCCTGCTTGCGCCCGGGGCTGGAGCTTCGAGCGACCATCC
GCGAATGCAGGAGTTCGCCTGCCTTTTAGCGCCTCTGGGCGAGGTGGTGACTTTTGACTATCCCTATATGCTGGAGGGAC
GAAAGCGGCCAGATCCGTTGCCGAAGCTGGTTGCTGCCCATCGCGAAGCGCTCGTCGGCGTCGCCGATCGCCACCGTGGC
CCGGTTGTCCTTGTCGGCAAGAGCATGGGCGGGCGCGTCGGCTGCCACCTCGCCCTGGCAGTGCCCGTCACAGGCGTCAT
CTGTCTCGGCTACCCTTTGTGTGGCGCAGGCGATCCCGCCAAGCTCCGCGATCAGGTTCTGACTGAACTGCGCACGCCGA
TCCTCTTCGTACAGGGGACGCGCGACAAACTCTGCCCGCTCGATTTGCTCGAGGCCACACGCGAGAAGATGTCTGCGCCC
TCCCGCCTGCATGTTGTTTCAGGCGGCGATCATTCGCTGTTGGTCTCGAAAACCGCACTGAAGGCGCAGGGCCGCAGCCA
GGCCGATGTCGACGCGGAGATCGGGACGGCGGTCGCCGAATTCCTGCTCGGCCTGTCGGGCGAAGCCTAA

Upstream 100 bases:

>100_bases
AGGGGAACGTTGCCATCACTTTAGACAGGGGAGGCGTGTCCGGTGACGACGGAATGAGAATTTGCAACCCTCATTTTTTG
TCGGCCCGCCTTTAGGCACG

Downstream 100 bases:

>100_bases
CCTGGCTTCGCGACCGTCGGCGACTTCGTCCTTTAAGGTGATCGCATGTGCAATCCACATTTGATCACCAAGGGGCAGAT
CGCGATCTCGCTTCGGTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MIYSPAMAQSTFAFLLAPGAGASSDHPRMQEFACLLAPLGEVVTFDYPYMLEGRKRPDPLPKLVAAHREALVGVADRHRG
PVVLVGKSMGGRVGCHLALAVPVTGVICLGYPLCGAGDPAKLRDQVLTELRTPILFVQGTRDKLCPLDLLEATREKMSAP
SRLHVVSGGDHSLLVSKTALKAQGRSQADVDAEIGTAVAEFLLGLSGEA

Sequences:

>Translated_209_residues
MIYSPAMAQSTFAFLLAPGAGASSDHPRMQEFACLLAPLGEVVTFDYPYMLEGRKRPDPLPKLVAAHREALVGVADRHRG
PVVLVGKSMGGRVGCHLALAVPVTGVICLGYPLCGAGDPAKLRDQVLTELRTPILFVQGTRDKLCPLDLLEATREKMSAP
SRLHVVSGGDHSLLVSKTALKAQGRSQADVDAEIGTAVAEFLLGLSGEA
>Mature_209_residues
MIYSPAMAQSTFAFLLAPGAGASSDHPRMQEFACLLAPLGEVVTFDYPYMLEGRKRPDPLPKLVAAHREALVGVADRHRG
PVVLVGKSMGGRVGCHLALAVPVTGVICLGYPLCGAGDPAKLRDQVLTELRTPILFVQGTRDKLCPLDLLEATREKMSAP
SRLHVVSGGDHSLLVSKTALKAQGRSQADVDAEIGTAVAEFLLGLSGEA

Specific function: Unknown

COG id: COG3571

COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI169234787, Length=125, Percent_Identity=37.6, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI21361734, Length=125, Percent_Identity=37.6, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI208610009, Length=131, Percent_Identity=38.1679389312977, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28573823, Length=190, Percent_Identity=26.8421052631579, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653546, Length=190, Percent_Identity=26.8421052631579, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28573824, Length=190, Percent_Identity=26.8421052631579, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22066; Mature: 22066

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00310 LAMP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYSPAMAQSTFAFLLAPGAGASSDHPRMQEFACLLAPLGEVVTFDYPYMLEGRKRPDPL
CCCCCHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCH
PKLVAAHREALVGVADRHRGPVVLVGKSMGGRVGCHLALAVPVTGVICLGYPLCGAGDPA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEEHHHHHHHHHCCCCCCCCCHH
KLRDQVLTELRTPILFVQGTRDKLCPLDLLEATREKMSAPSRLHVVSGGDHSLLVSKTAL
HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHH
KAQGRSQADVDAEIGTAVAEFLLGLSGEA
HHCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIYSPAMAQSTFAFLLAPGAGASSDHPRMQEFACLLAPLGEVVTFDYPYMLEGRKRPDPL
CCCCCHHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCEECCCCCCCCH
PKLVAAHREALVGVADRHRGPVVLVGKSMGGRVGCHLALAVPVTGVICLGYPLCGAGDPA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEEHHHHHHHHHCCCCCCCCCHH
KLRDQVLTELRTPILFVQGTRDKLCPLDLLEATREKMSAPSRLHVVSGGDHSLLVSKTAL
HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHH
KAQGRSQADVDAEIGTAVAEFLLGLSGEA
HHCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA