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The map label for this gene is 192289448

Identifier: 192289448

GI number: 192289448

Start: 1084153

End: 1084716

Strand: Reverse

Name: 192289448

Synonym: Rpal_1021

Alternate gene names: NA

Gene position: 1084716-1084153 (Counterclockwise)

Preceding gene: 192289449

Following gene: 192289447

Centisome position: 18.88

GC content: 65.6

Gene sequence:

>564_bases
ATGAAGATCTACCTCGCCGGCCCCGACGTGTTCCTGCCCGATGCGCTGTTGATCGGCCGGCGCAAGGCCGAGCTGTGCGC
AGACCACGGCTTCACCGGGCTGTTTCCGCTCGACAACGCGGTGGCGCTCGCCGCGCACGACGCGTCGCTGCAGATCTTCC
GCGGCAACGAAGCGATGATGAATGATGCCGATGCCATCATCGCCAATCTGACGCCATTTCGCGGGCCCAGTGCCGACGCC
GGCACGGTGTACGAACTCGGCTACATGGCCGGACGCGGCAAGCTGGTGCTCGGTTATTCGAACGATCCGGCGAACTACGT
CGCGCGCGTCAAGCAGTTCGAAACCGTCGAGAGCCGCAACGGTCTGCTGATCGGTGCCGACGGCCTTGCGGTCGAGGACT
TCGGCCTCGCCGACAACCTGATGCTGATCCACTGCCTCGATCTGCACGGGGCTCCGTTAGTGACGCCACGCCGGCGGCCA
GCCGACCTGTGGCACGATCTCGACAGCTTCACCGCCTGTCTTCAGATGGCGGCAGAGCGGCTGCGGCCGCAACAGGCGCA
CTGA

Upstream 100 bases:

>100_bases
AGCCGCGGACACCGCGCGTCGTTACTTCGCCACCCCACCCCGCTCGCTCCGCGAGCGACCCTCCCCCTCCAGGGGAGGGT
GAATTTGCACCCACCCGACC

Downstream 100 bases:

>100_bases
CCATGGCCAAGTCATCGGACTCCACGCCCCGCAAGCGCGCCGATGTCGTGCTGGTCGAACGCGGCCTGTTCGACAGCCGT
GCACGGGCGCAGGCGGCGAT

Product: nucleoside 2-deoxyribosyltransferase

Products: NA

Alternate protein names: Nucleoside 2-Deoxyribosyltransferase Protein; Nucleoside 2-Deoxyribosyltransferase Family Protein

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MKIYLAGPDVFLPDALLIGRRKAELCADHGFTGLFPLDNAVALAAHDASLQIFRGNEAMMNDADAIIANLTPFRGPSADA
GTVYELGYMAGRGKLVLGYSNDPANYVARVKQFETVESRNGLLIGADGLAVEDFGLADNLMLIHCLDLHGAPLVTPRRRP
ADLWHDLDSFTACLQMAAERLRPQQAH

Sequences:

>Translated_187_residues
MKIYLAGPDVFLPDALLIGRRKAELCADHGFTGLFPLDNAVALAAHDASLQIFRGNEAMMNDADAIIANLTPFRGPSADA
GTVYELGYMAGRGKLVLGYSNDPANYVARVKQFETVESRNGLLIGADGLAVEDFGLADNLMLIHCLDLHGAPLVTPRRRP
ADLWHDLDSFTACLQMAAERLRPQQAH
>Mature_187_residues
MKIYLAGPDVFLPDALLIGRRKAELCADHGFTGLFPLDNAVALAAHDASLQIFRGNEAMMNDADAIIANLTPFRGPSADA
GTVYELGYMAGRGKLVLGYSNDPANYVARVKQFETVESRNGLLIGADGLAVEDFGLADNLMLIHCLDLHGAPLVTPRRRP
ADLWHDLDSFTACLQMAAERLRPQQAH

Specific function: Unknown

COG id: COG3613

COG function: function code F; Nucleoside 2-deoxyribosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20274; Mature: 20274

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYLAGPDVFLPDALLIGRRKAELCADHGFTGLFPLDNAVALAAHDASLQIFRGNEAMM
CEEEEECCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEECCEEEEEECCCHHH
NDADAIIANLTPFRGPSADAGTVYELGYMAGRGKLVLGYSNDPANYVARVKQFETVESRN
CCHHHHEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
GLLIGADGLAVEDFGLADNLMLIHCLDLHGAPLVTPRRRPADLWHDLDSFTACLQMAAER
CEEEECCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LRPQQAH
CCCCCCC
>Mature Secondary Structure
MKIYLAGPDVFLPDALLIGRRKAELCADHGFTGLFPLDNAVALAAHDASLQIFRGNEAMM
CEEEEECCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEECCEEEEEECCCHHH
NDADAIIANLTPFRGPSADAGTVYELGYMAGRGKLVLGYSNDPANYVARVKQFETVESRN
CCHHHHEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHCCC
GLLIGADGLAVEDFGLADNLMLIHCLDLHGAPLVTPRRRPADLWHDLDSFTACLQMAAER
CEEEECCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LRPQQAH
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA