Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192289393

Identifier: 192289393

GI number: 192289393

Start: 1031946

End: 1033631

Strand: Reverse

Name: 192289393

Synonym: Rpal_0965

Alternate gene names: NA

Gene position: 1033631-1031946 (Counterclockwise)

Preceding gene: 192289394

Following gene: 192289391

Centisome position: 17.99

GC content: 70.52

Gene sequence:

>1686_bases
ATGTCCGACAAGCCGAGATCCTTCTTTGGCGTCTTTACCGAGCGCGGCCCGCTGGGCGCGCTCGCGGTCGCCGGCGTGCT
GCTGTTCGGCATCGTCGGGCCGGCCTCGGCGCAGTTCTTCGATTTCGGCGGCCCGCCGCCCGCCCGTCAGCAGCGTGGCG
GCGGAGGTGGCGGCGGATTCGGCTGGTTCGGCAACGACGTGTTCCAGCCGTTCCATCAGAACCAGCCGCAGCGCCGCGCC
GCACCACGCGAGGACTATTCCAAGGCACCGGCACCGGAGAAACGCGAGACGATCCCGGACCGCAACGTGCTGGTGCTCGG
CGACTCGATGGCCGACTGGCTCGGCTACGGCCTGGAGCAGGCTTACGCCGAGCAGCCCGAAATGGGCGTGGTGCGCAAGT
TCAAGACCATCTCGGGCCTGCTCCGCTACGCGCCGAAGGGCGAGCCGTCCGACTGGGTCGCCGCCGCCAAGGAGGTGATC
GCCCAGGAGAACCCCGACGCGATCGTGGTGATGCTCGGCCTGTCGGACCGGATTGCGATCCGCGAGCAGGCGACGCCCGA
GAAGGACAAGAAGAAGGACGACAAGGCCGCCGCCAAGCCCGGCGAAGAGGCCAAGCCGGACGCCAAAGCGGACAACAAGA
CCGACGCGAAGCCCGACGGCAAAACCGACGCCAAGCCGGACGACAAGGCTGCCGACAACGCCGCCGCGGATGACGACGAG
GATGACGACGACTCGCTGCGGATCATGACCGAGAAGGGCAAGCGCGCCGCAGGCGGCGTCGCCCAGTTCCGCGAGGATCG
CTGGTCGGAGCTCTACGCCAAGAAGATCGAGGACCTGATCAACGTCCTCAAGGCCAAGAACGTCCCGATCCTGTGGGTGG
GCCTGCCGGCGGTGCGCGGCACCAAGGCGACCTCGGACATGCAGTTCCTCAACGCGCTGTATCGCGACGGCGCTGCCAAG
GCCGGCATCACCTATGTTGACGTCTGGGACGGCTTCGTCGACGAAGGCGGCCGCTACGTGTTGCAGGGCCCGGACTTCGA
AGGCCAGATCCGCCGGCTGCGCTCGTATGACGGCGTGTATTTCACCAAGGCCGGCGCCCGCAAGCTGGCGCATTACGCCG
AGCGCGAGATCGCCCGGCTACTGGCCGCGCGCAGCGGTCCGATCGCACTGCCGACAGAACCAGCCGCGCCCGACACGGCC
GCCAAGCCGCCGGCCGGACCGGCGCCGCGTCCCGCCGCCGGTCCGATCCTGCCGCTGGTTGCTTCTTCGGTGTCGACCGA
CCGCCTGCTCGGCGGCCCAGGCACCCAGCCCGCGCCGGTCGATGCGCTGGTCGCCCGCACTCTGGTGAAAGGCGAGCCGC
TGTCGGCGCCCGCCGGCCGCGCCGACGACGACGTCTGGCCGCGGCGTGAAGTCTCGATCGAAAAGGCCCAGGAGCCGCCG
CCGCCGAAGGAGCAGCCGAAGCCGGAGACCCCGGTGGCGAGCGCCAAGCCCAGCGGCAGCGCGCCGAGCGCTTCGGCGGG
ATCGCAGCCGCAGCAGCAACAACAGCAGCGCCGTGTCGCCCGCTCTGCTCCGCCGCCCCCGCCGCCGACCGCGTCCGGTT
TCTTCGGCTTCGGCGGCCCGCCGCAGCAACAAGGCCGCCGCGCCCCGCCGCCGAGCGCGTCGGGCTTCTTCTCGATCTTC
CGCTGA

Upstream 100 bases:

>100_bases
ACCGCCTTATGGAGCCGGCGAAAGCTGCCCGGTTGCGGCCCGAATCCGCTAGTATAGGGATCAGCTTCCGTTTTTCCGGT
GGCGATTGCGCAAGATCCGC

Downstream 100 bases:

>100_bases
CGCAAGATTCGAGATGCGCGGGACCATCCCGCGCACCTCATCGCAATGACCGCAACGCGGCTTAAGCGCCCTTACAAAAT
CAGCCCGCCGTCGACCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 561; Mature: 560

Protein sequence:

>561_residues
MSDKPRSFFGVFTERGPLGALAVAGVLLFGIVGPASAQFFDFGGPPPARQQRGGGGGGGFGWFGNDVFQPFHQNQPQRRA
APREDYSKAPAPEKRETIPDRNVLVLGDSMADWLGYGLEQAYAEQPEMGVVRKFKTISGLLRYAPKGEPSDWVAAAKEVI
AQENPDAIVVMLGLSDRIAIREQATPEKDKKKDDKAAAKPGEEAKPDAKADNKTDAKPDGKTDAKPDDKAADNAAADDDE
DDDDSLRIMTEKGKRAAGGVAQFREDRWSELYAKKIEDLINVLKAKNVPILWVGLPAVRGTKATSDMQFLNALYRDGAAK
AGITYVDVWDGFVDEGGRYVLQGPDFEGQIRRLRSYDGVYFTKAGARKLAHYAEREIARLLAARSGPIALPTEPAAPDTA
AKPPAGPAPRPAAGPILPLVASSVSTDRLLGGPGTQPAPVDALVARTLVKGEPLSAPAGRADDDVWPRREVSIEKAQEPP
PPKEQPKPETPVASAKPSGSAPSASAGSQPQQQQQQRRVARSAPPPPPPTASGFFGFGGPPQQQGRRAPPPSASGFFSIF
R

Sequences:

>Translated_561_residues
MSDKPRSFFGVFTERGPLGALAVAGVLLFGIVGPASAQFFDFGGPPPARQQRGGGGGGGFGWFGNDVFQPFHQNQPQRRA
APREDYSKAPAPEKRETIPDRNVLVLGDSMADWLGYGLEQAYAEQPEMGVVRKFKTISGLLRYAPKGEPSDWVAAAKEVI
AQENPDAIVVMLGLSDRIAIREQATPEKDKKKDDKAAAKPGEEAKPDAKADNKTDAKPDGKTDAKPDDKAADNAAADDDE
DDDDSLRIMTEKGKRAAGGVAQFREDRWSELYAKKIEDLINVLKAKNVPILWVGLPAVRGTKATSDMQFLNALYRDGAAK
AGITYVDVWDGFVDEGGRYVLQGPDFEGQIRRLRSYDGVYFTKAGARKLAHYAEREIARLLAARSGPIALPTEPAAPDTA
AKPPAGPAPRPAAGPILPLVASSVSTDRLLGGPGTQPAPVDALVARTLVKGEPLSAPAGRADDDVWPRREVSIEKAQEPP
PPKEQPKPETPVASAKPSGSAPSASAGSQPQQQQQQRRVARSAPPPPPPTASGFFGFGGPPQQQGRRAPPPSASGFFSIF
R
>Mature_560_residues
SDKPRSFFGVFTERGPLGALAVAGVLLFGIVGPASAQFFDFGGPPPARQQRGGGGGGGFGWFGNDVFQPFHQNQPQRRAA
PREDYSKAPAPEKRETIPDRNVLVLGDSMADWLGYGLEQAYAEQPEMGVVRKFKTISGLLRYAPKGEPSDWVAAAKEVIA
QENPDAIVVMLGLSDRIAIREQATPEKDKKKDDKAAAKPGEEAKPDAKADNKTDAKPDGKTDAKPDDKAADNAAADDDED
DDDSLRIMTEKGKRAAGGVAQFREDRWSELYAKKIEDLINVLKAKNVPILWVGLPAVRGTKATSDMQFLNALYRDGAAKA
GITYVDVWDGFVDEGGRYVLQGPDFEGQIRRLRSYDGVYFTKAGARKLAHYAEREIARLLAARSGPIALPTEPAAPDTAA
KPPAGPAPRPAAGPILPLVASSVSTDRLLGGPGTQPAPVDALVARTLVKGEPLSAPAGRADDDVWPRREVSIEKAQEPPP
PKEQPKPETPVASAKPSGSAPSASAGSQPQQQQQQRRVARSAPPPPPPTASGFFGFGGPPQQQGRRAPPPSASGFFSIFR

Specific function: Unknown

COG id: COG2845

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59826; Mature: 59694

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKPRSFFGVFTERGPLGALAVAGVLLFGIVGPASAQFFDFGGPPPARQQRGGGGGGGF
CCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHCCCCCCCCC
GWFGNDVFQPFHQNQPQRRAAPREDYSKAPAPEKRETIPDRNVLVLGDSMADWLGYGLEQ
CCCCHHHHHHHHCCCCHHHCCCHHHHHCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHH
AYAEQPEMGVVRKFKTISGLLRYAPKGEPSDWVAAAKEVIAQENPDAIVVMLGLSDRIAI
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE
REQATPEKDKKKDDKAAAKPGEEAKPDAKADNKTDAKPDGKTDAKPDDKAADNAAADDDE
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
DDDDSLRIMTEKGKRAAGGVAQFREDRWSELYAKKIEDLINVLKAKNVPILWVGLPAVRG
CCCCCEEEEECCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
TKATSDMQFLNALYRDGAAKAGITYVDVWDGFVDEGGRYVLQGPDFEGQIRRLRSYDGVY
CCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEE
FTKAGARKLAHYAEREIARLLAARSGPIALPTEPAAPDTAAKPPAGPAPRPAAGPILPLV
EECHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ASSVSTDRLLGGPGTQPAPVDALVARTLVKGEPLSAPAGRADDDVWPRREVSIEKAQEPP
HCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCC
PPKEQPKPETPVASAKPSGSAPSASAGSQPQQQQQQRRVARSAPPPPPPTASGFFGFGGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PQQQGRRAPPPSASGFFSIFR
CHHCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
SDKPRSFFGVFTERGPLGALAVAGVLLFGIVGPASAQFFDFGGPPPARQQRGGGGGGGF
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHCCCCCCCCC
GWFGNDVFQPFHQNQPQRRAAPREDYSKAPAPEKRETIPDRNVLVLGDSMADWLGYGLEQ
CCCCHHHHHHHHCCCCHHHCCCHHHHHCCCCCCHHHCCCCCCEEEECCHHHHHHHHHHHH
AYAEQPEMGVVRKFKTISGLLRYAPKGEPSDWVAAAKEVIAQENPDAIVVMLGLSDRIAI
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE
REQATPEKDKKKDDKAAAKPGEEAKPDAKADNKTDAKPDGKTDAKPDDKAADNAAADDDE
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC
DDDDSLRIMTEKGKRAAGGVAQFREDRWSELYAKKIEDLINVLKAKNVPILWVGLPAVRG
CCCCCEEEEECCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
TKATSDMQFLNALYRDGAAKAGITYVDVWDGFVDEGGRYVLQGPDFEGQIRRLRSYDGVY
CCCHHHHHHHHHHHHCCCCCCCCEEEECHHHHHCCCCEEEEECCCCHHHHHHHHHCCCEE
FTKAGARKLAHYAEREIARLLAARSGPIALPTEPAAPDTAAKPPAGPAPRPAAGPILPLV
EECHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
ASSVSTDRLLGGPGTQPAPVDALVARTLVKGEPLSAPAGRADDDVWPRREVSIEKAQEPP
HCCCCCCHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCHHHCCCCC
PPKEQPKPETPVASAKPSGSAPSASAGSQPQQQQQQRRVARSAPPPPPPTASGFFGFGGP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PQQQGRRAPPPSASGFFSIFR
CHHCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA