| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is exoN [H]
Identifier: 192289383
GI number: 192289383
Start: 1016116
End: 1016991
Strand: Reverse
Name: exoN [H]
Synonym: Rpal_0955
Alternate gene names: 192289383
Gene position: 1016991-1016116 (Counterclockwise)
Preceding gene: 192289384
Following gene: 192289381
Centisome position: 17.71
GC content: 64.84
Gene sequence:
>876_bases ATGAAAATCCGCAAAGCCGTCTTCCCGGTCGCCGGCCTCGGCACCCGCGTTCTCCCCGCCACCAAGGCGATGCCGAAGGA GATGCTGACCATCGTCGATCGACCGCTGATCCAGTACGTCGTCGACGAAGCGCGGGAAGCCGGCATCGAGCACTTCGTCT TCGTCACGGGACGCAACAAGGGCATGATCGAGGATCACTTCGACCGCCAGTTCGAGCTCGATGTGACGCTGGAGAAGCGC AACAAGAAGAGCGAGATGGAGATCCTGGCGCGCGACCAGCCGGAGGCCGGCGCGATGAGCTTCACCCGCCAGCAGGCGCC GCACGGCCTCGGCCACGCGGTGTGGTGCGCCCGCGACATCGTCGGCAACGAGCCGTTCGCGGTGGTGCTGCCGGACGAAC TGGTGCTCAATACTCCGGGCTGCCTGAAGCAGATGATCCAGGCCGCCGAGAAGCTCGGCGACAAGGCCAACGTCATCGCG GTGGAGGAAGTGCCGGCCGACAAGACCCATCAATACGGCATCTGCGGCGTCGGCAAGCGCGATGGCAAGATGTTCGAGAT CGACGGCATGGTGGAGAAGCCGGCGCCCGGCACGGCGCCCTCGAACCTGTCGATTTCCGGGCGCTACATCCTGCAGCCGG AAATCTTCCAGATCCTGGCGACGCAGGAGCGCGGCGCCGGCGGCGAGATCCAGCTCACCGACGCGATGATCGGGCTGTCG AAGACGCAGAAATTCTACGGCGTCGAGTTCGAAGGCGAACGCCACGACTGCGGTTCGAAGGCCGGCTTCCTGCGCGCCAA CATCGCGTTCGCGATGCAGCGCGACGACCTGCGCGCCGGCCTGATCGAAGACATGAAGCGTTATCTGGAGAAGTGA
Upstream 100 bases:
>100_bases GCTTCGCGCCGCGTTTCGGAACTTCACACATCCGCCTTGGTTGCAGGCTGCAAGACCGTCCGGTTTCGCCTTTCCGTCCC TCTCGAAAGATCTCCAGACC
Downstream 100 bases:
>100_bases TCACGCTCAGCCGGAGCGCAGCGGCAGAGGTTACGCCACCAGTGTGACCTCGCCGCGCACGGCGACGACGCAGCGGTTGC GGCCGAGTTCCTTGGCCGCA
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKIRKAVFPVAGLGTRVLPATKAMPKEMLTIVDRPLIQYVVDEAREAGIEHFVFVTGRNKGMIEDHFDRQFELDVTLEKR NKKSEMEILARDQPEAGAMSFTRQQAPHGLGHAVWCARDIVGNEPFAVVLPDELVLNTPGCLKQMIQAAEKLGDKANVIA VEEVPADKTHQYGICGVGKRDGKMFEIDGMVEKPAPGTAPSNLSISGRYILQPEIFQILATQERGAGGEIQLTDAMIGLS KTQKFYGVEFEGERHDCGSKAGFLRANIAFAMQRDDLRAGLIEDMKRYLEK
Sequences:
>Translated_291_residues MKIRKAVFPVAGLGTRVLPATKAMPKEMLTIVDRPLIQYVVDEAREAGIEHFVFVTGRNKGMIEDHFDRQFELDVTLEKR NKKSEMEILARDQPEAGAMSFTRQQAPHGLGHAVWCARDIVGNEPFAVVLPDELVLNTPGCLKQMIQAAEKLGDKANVIA VEEVPADKTHQYGICGVGKRDGKMFEIDGMVEKPAPGTAPSNLSISGRYILQPEIFQILATQERGAGGEIQLTDAMIGLS KTQKFYGVEFEGERHDCGSKAGFLRANIAFAMQRDDLRAGLIEDMKRYLEK >Mature_291_residues MKIRKAVFPVAGLGTRVLPATKAMPKEMLTIVDRPLIQYVVDEAREAGIEHFVFVTGRNKGMIEDHFDRQFELDVTLEKR NKKSEMEILARDQPEAGAMSFTRQQAPHGLGHAVWCARDIVGNEPFAVVLPDELVLNTPGCLKQMIQAAEKLGDKANVIA VEEVPADKTHQYGICGVGKRDGKMFEIDGMVEKPAPGTAPSNLSISGRYILQPEIFQILATQERGAGGEIQLTDAMIGLS KTQKFYGVEFEGERHDCGSKAGFLRANIAFAMQRDDLRAGLIEDMKRYLEK
Specific function: May Play A Role In Stationary Phase Survival. [C]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=296, Percent_Identity=44.5945945945946, Blast_Score=220, Evalue=1e-58, Organism=Escherichia coli, GI1788355, Length=278, Percent_Identity=39.2086330935252, Blast_Score=189, Evalue=2e-49,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32231; Mature: 32231
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRKAVFPVAGLGTRVLPATKAMPKEMLTIVDRPLIQYVVDEAREAGIEHFVFVTGRNK CCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC GMIEDHFDRQFELDVTLEKRNKKSEMEILARDQPEAGAMSFTRQQAPHGLGHAVWCARDI CCCHHCCCCEEEEEEEEECCCCCCHHHHEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHH VGNEPFAVVLPDELVLNTPGCLKQMIQAAEKLGDKANVIAVEEVPADKTHQYGICGVGKR CCCCCEEEECCCHHEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEECCCCC DGKMFEIDGMVEKPAPGTAPSNLSISGRYILQPEIFQILATQERGAGGEIQLTDAMIGLS CCEEEEECCEEECCCCCCCCCCEEECCEEEECHHHHHHHHHHCCCCCCEEEEEHHHHHHH KTQKFYGVEFEGERHDCGSKAGFLRANIAFAMQRDDLRAGLIEDMKRYLEK HCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKIRKAVFPVAGLGTRVLPATKAMPKEMLTIVDRPLIQYVVDEAREAGIEHFVFVTGRNK CCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC GMIEDHFDRQFELDVTLEKRNKKSEMEILARDQPEAGAMSFTRQQAPHGLGHAVWCARDI CCCHHCCCCEEEEEEEEECCCCCCHHHHEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHH VGNEPFAVVLPDELVLNTPGCLKQMIQAAEKLGDKANVIAVEEVPADKTHQYGICGVGKR CCCCCEEEECCCHHEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEECCCCC DGKMFEIDGMVEKPAPGTAPSNLSISGRYILQPEIFQILATQERGAGGEIQLTDAMIGLS CCEEEEECCEEECCCCCCCCCCEEECCEEEECHHHHHHHHHHCCCCCCEEEEEHHHHHHH KTQKFYGVEFEGERHDCGSKAGFLRANIAFAMQRDDLRAGLIEDMKRYLEK HCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]