| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192289274
Identifier: 192289274
GI number: 192289274
Start: 897233
End: 897634
Strand: Reverse
Name: 192289274
Synonym: Rpal_0846
Alternate gene names: NA
Gene position: 897634-897233 (Counterclockwise)
Preceding gene: 192289276
Following gene: 192289273
Centisome position: 15.63
GC content: 64.43
Gene sequence:
>402_bases ATGCAATATTGGATCGGTGCTTTTGCAGTCGCCCTGGTGGTCGTGATCGGCTACGCGGGCGGCCCTCTCGCCGCTGTCAT CACGATCGTCGCCTTCCTGGTCGCGCTGTTCCTGCTGTGGGCGCGCGAACTCGGCTTCAAGGGCGCTTGGGAGAAGTTCG GCCTGCAGACCCTGGAACTGCCGCTGAAGGTCGACAACTGGGATCGCTTCAAGCTGATCTTCGCCGACGAGAACAAGCTG GTGAAGGCCTGCGCCACGGCGGTCGCACTGATCGCGCTGGCGATGATTCTGCCGCGCAATCTGGCGGCGCTGGTGTATCT CGCCGCCGCTGCGTGGGGCGTGTTCGAGGTCTATCGTGCCAACAGCGCTGCTGCGCCGCGCGCCGGCACGCCGATCAACT AA
Upstream 100 bases:
>100_bases GAGCGCGTGCCTGGCTTGTCATTCCACCTCACCCGCGACGACCGCGCGTGAGCGAACCTGAAAGGGCACCCGCGAGCGCC GGGTGACGAAAGGTAAATCA
Downstream 100 bases:
>100_bases CCGGGCAACGTCCGGCGCGGCAAACAGCTGCCGCTCGTATTTCAGAAGGGCCGGCGGAGCGATCCGCCGGCCCTTTGCTT TGTGTGGAAGACGGCCGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MQYWIGAFAVALVVVIGYAGGPLAAVITIVAFLVALFLLWARELGFKGAWEKFGLQTLELPLKVDNWDRFKLIFADENKL VKACATAVALIALAMILPRNLAALVYLAAAAWGVFEVYRANSAAAPRAGTPIN
Sequences:
>Translated_133_residues MQYWIGAFAVALVVVIGYAGGPLAAVITIVAFLVALFLLWARELGFKGAWEKFGLQTLELPLKVDNWDRFKLIFADENKL VKACATAVALIALAMILPRNLAALVYLAAAAWGVFEVYRANSAAAPRAGTPIN >Mature_133_residues MQYWIGAFAVALVVVIGYAGGPLAAVITIVAFLVALFLLWARELGFKGAWEKFGLQTLELPLKVDNWDRFKLIFADENKL VKACATAVALIALAMILPRNLAALVYLAAAAWGVFEVYRANSAAAPRAGTPIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14337; Mature: 14337
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYWIGAFAVALVVVIGYAGGPLAAVITIVAFLVALFLLWARELGFKGAWEKFGLQTLEL CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEC PLKVDNWDRFKLIFADENKLVKACATAVALIALAMILPRNLAALVYLAAAAWGVFEVYRA CEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSAAAPRAGTPIN CCCCCCCCCCCCC >Mature Secondary Structure MQYWIGAFAVALVVVIGYAGGPLAAVITIVAFLVALFLLWARELGFKGAWEKFGLQTLEL CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEC PLKVDNWDRFKLIFADENKLVKACATAVALIALAMILPRNLAALVYLAAAAWGVFEVYRA CEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NSAAAPRAGTPIN CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA