Click here to switch to the map view.

The map label for this gene is 192289165

Identifier: 192289165

GI number: 192289165

Start: 770496

End: 771674

Strand: Reverse

Name: 192289165

Synonym: Rpal_0735

Alternate gene names: NA

Gene position: 771674-770496 (Counterclockwise)

Preceding gene: 192289166

Following gene: 192289164

Centisome position: 13.43

GC content: 64.97

Gene sequence:

>1179_bases
ATGATCGATCGACGTCGTCTGTTGTCGCTCGGAGCGTCGGCCGGTGCCGCGCTGGCCTGCGGCCCGTTCATTCGCCCGTC
CTATGCGCAAGCTGGCGCCTTGAAGGTCGGGCTGCTGCTGCCCTACAGCGGCACCTATGCGCCGCTCGGCGAAGCCATCA
CCCGCGGGCTCGAGCTGTATGTGCAATCGCAGGGCGGCAAGCTCGGCGGTCGTAGCATCAGCTTCGTCAAAGTCGATGAC
GAATCCGCGCCGCCCAAGGCCACCGAGCTCACCACCAAGCTGATCCAGAGCGAGAAAGCGGACGTGCTGATCGGCACGGT
GCATTCCGGCGTCGCAATGGCGATGGTGAAGATTGCTCGTGAGGACGGCATCCCGACCATCGTTCCGAATGCCGGCGCCG
ACATCATCACCCGCGCGATGTGTGCGCCTAACGTGTTCCGCACCTCGTTCGCCAACGGCCAGATCGGCCGAGCCACCGGC
GATGCCATGATCAAGGCCGGTCTGAAGAAGGCCGTCACGGTGACCTGGAAATACGCCGCGGGCGAAGAGATGGTGTCCGG
CTTCAAGAAGTCATTCACCGCCGGCAAGGGCGAGGTGGTCAAGGACATCACCATCGCGTTCCCGGACGTCGAATTCCAGT
CGGCGCTGGCCGAGATCGCGTCGCTAAAGCCGGACTGCGTCTATGCGTTCTTCTCCGGCGGCGGCGCGCTGAAATTCATC
AAGGATTACGCGGCGGCCAATCTCGGCATTCCGCTGTGGGGACCGGGCTTCCTCACCGACGGCGTCGAAGCCGCGGCCGG
TCCGGCCGGTGACGGCATCAAGACCGTGCTGCACTACGTGAGCGATCTCGACAACGCCGAGAACCAGGCCTTCGTCAAAT
CGTTCGAGGCTGCCTACAAGATCCCGCCGGACGTGTTCGCGGTGCAGGGCTGGGATGCCGGGCAACTGCTCGACGCCGGC
GTCAAGGCGGTCGGCGGCGATGTCGCTAAGCGCAAGGAGCTCAATGCTGCGATGGCAGCGGCGAGCTTCGCCAGCCCGCG
CGGACCGTTCAAGCTGTCGGCCGCGCACAACCCGGTGCAGAATTTCTATTTGCGCGAGCTGAAGGGCGGCAAGAGCGTCA
ATCTCGGCCTCGCCGCACCGGCGGTCGCCGACGAAGCGATCGGCTGCAAGCTGAGCTGA

Upstream 100 bases:

>100_bases
CGCAAATTGATCTGGCTCGATGTAATAGTCGCAATAAAGTACCGAAAAACAAAATGACGAGCTGATCGCTCGCGAAGGGA
AGATCGAGGGGAGGACTACC

Downstream 100 bases:

>100_bases
CAATTGCCCGACGGAGGGTTGCGACAGCGGCCGGCGCATCGTCGCCGCCCGCTGCCCTTCCCGAACGACATCGGTGACCA
GTCCCATGAGTCTTATTCTG

Product: extracellular ligand-binding receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MIDRRRLLSLGASAGAALACGPFIRPSYAQAGALKVGLLLPYSGTYAPLGEAITRGLELYVQSQGGKLGGRSISFVKVDD
ESAPPKATELTTKLIQSEKADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATG
DAMIKAGLKKAVTVTWKYAAGEEMVSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGGGALKFI
KDYAAANLGIPLWGPGFLTDGVEAAAGPAGDGIKTVLHYVSDLDNAENQAFVKSFEAAYKIPPDVFAVQGWDAGQLLDAG
VKAVGGDVAKRKELNAAMAAASFASPRGPFKLSAAHNPVQNFYLRELKGGKSVNLGLAAPAVADEAIGCKLS

Sequences:

>Translated_392_residues
MIDRRRLLSLGASAGAALACGPFIRPSYAQAGALKVGLLLPYSGTYAPLGEAITRGLELYVQSQGGKLGGRSISFVKVDD
ESAPPKATELTTKLIQSEKADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATG
DAMIKAGLKKAVTVTWKYAAGEEMVSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGGGALKFI
KDYAAANLGIPLWGPGFLTDGVEAAAGPAGDGIKTVLHYVSDLDNAENQAFVKSFEAAYKIPPDVFAVQGWDAGQLLDAG
VKAVGGDVAKRKELNAAMAAASFASPRGPFKLSAAHNPVQNFYLRELKGGKSVNLGLAAPAVADEAIGCKLS
>Mature_392_residues
MIDRRRLLSLGASAGAALACGPFIRPSYAQAGALKVGLLLPYSGTYAPLGEAITRGLELYVQSQGGKLGGRSISFVKVDD
ESAPPKATELTTKLIQSEKADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATG
DAMIKAGLKKAVTVTWKYAAGEEMVSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGGGALKFI
KDYAAANLGIPLWGPGFLTDGVEAAAGPAGDGIKTVLHYVSDLDNAENQAFVKSFEAAYKIPPDVFAVQGWDAGQLLDAG
VKAVGGDVAKRKELNAAMAAASFASPRGPFKLSAAHNPVQNFYLRELKGGKSVNLGLAAPAVADEAIGCKLS

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 40675; Mature: 40675

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRRRLLSLGASAGAALACGPFIRPSYAQAGALKVGLLLPYSGTYAPLGEAITRGLELY
CCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCEEEE
VQSQGGKLGGRSISFVKVDDESAPPKATELTTKLIQSEKADVLIGTVHSGVAMAMVKIAR
EECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH
EDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKAGLKKAVTVTWKYAA
HCCCCEECCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECC
GEEMVSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGGGALKFI
CHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
KDYAAANLGIPLWGPGFLTDGVEAAAGPAGDGIKTVLHYVSDLDNAENQAFVKSFEAAYK
HHHHHHCCCCCCCCCCHHHCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
IPPDVFAVQGWDAGQLLDAGVKAVGGDVAKRKELNAAMAAASFASPRGPFKLSAAHNPVQ
CCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHH
NFYLRELKGGKSVNLGLAAPAVADEAIGCKLS
HHHHHHHCCCCEEECCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MIDRRRLLSLGASAGAALACGPFIRPSYAQAGALKVGLLLPYSGTYAPLGEAITRGLELY
CCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCEEEE
VQSQGGKLGGRSISFVKVDDESAPPKATELTTKLIQSEKADVLIGTVHSGVAMAMVKIAR
EECCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHH
EDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKAGLKKAVTVTWKYAA
HCCCCEECCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEEEECC
GEEMVSGFKKSFTAGKGEVVKDITIAFPDVEFQSALAEIASLKPDCVYAFFSGGGALKFI
CHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHH
KDYAAANLGIPLWGPGFLTDGVEAAAGPAGDGIKTVLHYVSDLDNAENQAFVKSFEAAYK
HHHHHHCCCCCCCCCCHHHCCCHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHC
IPPDVFAVQGWDAGQLLDAGVKAVGGDVAKRKELNAAMAAASFASPRGPFKLSAAHNPVQ
CCCCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHH
NFYLRELKGGKSVNLGLAAPAVADEAIGCKLS
HHHHHHHCCCCEEECCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA