| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is braD [H]
Identifier: 192289164
GI number: 192289164
Start: 769550
End: 770410
Strand: Reverse
Name: braD [H]
Synonym: Rpal_0734
Alternate gene names: 192289164
Gene position: 770410-769550 (Counterclockwise)
Preceding gene: 192289165
Following gene: 192289163
Centisome position: 13.41
GC content: 62.83
Gene sequence:
>861_bases ATGAGTCTTATTCTGATCCAGGCGCTGAACGGCCTACAGACCGGGCTGGTGATCTTCCTGGCCGCCAGCGGCCTGACCCT GGTGTTCGGCATTCTCGGCGTCATCAATCTCTCGCACGGCTCGTTCTACATGCTCGGCGCCTATTTGGCGCTCTCGCTGA CCGGCATGTTCGGCGACGTCTTTCTGGCGCTGATCGCCGGCATCCCGCTCGCCTTCCTGCTTGGTCTGGCGATCGAGTGG CTGTTCATCCGCCATCTCTACGACCGCGACCACCTGCAGCAGGTGCTGCTGACCTTCGCGCTGATCCTGATCTTCAATGA ATTCCAGCAAGTGGTGTGGGGATCGTATCCGCACTCGATCCCGGCGCCGAGCTATCTGGCCAACAGCGTCCGGCTCACCG AAGGTCTGAGTTACCCGGTCTATCGATTGGCGCTGATGGCGATCTGCGTCGCGCTGGCGATTGCGATGGCGCTGGTGATC CAGAAGACCCGGATCGGCCGCCTGATCCGTGCCGCCGAGTCCAATCGCGAGATGGTCGAAGCGCTCGGCTTCGACTCGCG GCTGATCTTCCGGATGGTGTTCGCCACCGGTGTCGCACTCGCCGCCACCGCCGGCATGCTCGCGGCCCCAATCGAGAGCG CCTATCCAGGCATCGGAGATCGCGTGCTGATCGTCTCGTTCGTGGTTGTGGTGATCGGCGGCATCGGTTCGGTACGCGGT GCGTTCATCGGATCGTTGCTGATCGGCATGGCCGACGCCTTCGGCAAGGTGTTCCTACCGCAGTTCTCCAGCATCATCAT CTACGCGTTGATGGCGCTGGTGCTGGTGATACGCCCGGCCGGGCTGTTCGGGCGGGCATGA
Upstream 100 bases:
>100_bases TGCAAGCTGAGCTGACAATTGCCCGACGGAGGGTTGCGACAGCGGCCGGCGCATCGTCGCCGCCCGCTGCCCTTCCCGAA CGACATCGGTGACCAGTCCC
Downstream 100 bases:
>100_bases CGATGCTGACCCGCCCCAACCTCGTCGTCGTCCTGTTCTTCACGCTGCTGCTCGGCTGCCTGCTGGCGCTGCCGTTCGTC GCCGGGCCGTATCCGGTCAA
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSLILIQALNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMLGAYLALSLTGMFGDVFLALIAGIPLAFLLGLAIEW LFIRHLYDRDHLQQVLLTFALILIFNEFQQVVWGSYPHSIPAPSYLANSVRLTEGLSYPVYRLALMAICVALAIAMALVI QKTRIGRLIRAAESNREMVEALGFDSRLIFRMVFATGVALAATAGMLAAPIESAYPGIGDRVLIVSFVVVVIGGIGSVRG AFIGSLLIGMADAFGKVFLPQFSSIIIYALMALVLVIRPAGLFGRA
Sequences:
>Translated_286_residues MSLILIQALNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMLGAYLALSLTGMFGDVFLALIAGIPLAFLLGLAIEW LFIRHLYDRDHLQQVLLTFALILIFNEFQQVVWGSYPHSIPAPSYLANSVRLTEGLSYPVYRLALMAICVALAIAMALVI QKTRIGRLIRAAESNREMVEALGFDSRLIFRMVFATGVALAATAGMLAAPIESAYPGIGDRVLIVSFVVVVIGGIGSVRG AFIGSLLIGMADAFGKVFLPQFSSIIIYALMALVLVIRPAGLFGRA >Mature_285_residues SLILIQALNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMLGAYLALSLTGMFGDVFLALIAGIPLAFLLGLAIEWL FIRHLYDRDHLQQVLLTFALILIFNEFQQVVWGSYPHSIPAPSYLANSVRLTEGLSYPVYRLALMAICVALAIAMALVIQ KTRIGRLIRAAESNREMVEALGFDSRLIFRMVFATGVALAATAGMLAAPIESAYPGIGDRVLIVSFVVVVIGGIGSVRGA FIGSLLIGMADAFGKVFLPQFSSIIIYALMALVLVIRPAGLFGRA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789866, Length=294, Percent_Identity=29.9319727891156, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 30638; Mature: 30507
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLILIQALNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMLGAYLALSLTGMFGDV CCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLALIAGIPLAFLLGLAIEWLFIRHLYDRDHLQQVLLTFALILIFNEFQQVVWGSYPHSI HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PAPSYLANSVRLTEGLSYPVYRLALMAICVALAIAMALVIQKTRIGRLIRAAESNREMVE CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGFDSRLIFRMVFATGVALAATAGMLAAPIESAYPGIGDRVLIVSFVVVVIGGIGSVRG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHH AFIGSLLIGMADAFGKVFLPQFSSIIIYALMALVLVIRPAGLFGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLILIQALNGLQTGLVIFLAASGLTLVFGILGVINLSHGSFYMLGAYLALSLTGMFGDV CEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH FLALIAGIPLAFLLGLAIEWLFIRHLYDRDHLQQVLLTFALILIFNEFQQVVWGSYPHSI HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PAPSYLANSVRLTEGLSYPVYRLALMAICVALAIAMALVIQKTRIGRLIRAAESNREMVE CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALGFDSRLIFRMVFATGVALAATAGMLAAPIESAYPGIGDRVLIVSFVVVVIGGIGSVRG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHH AFIGSLLIGMADAFGKVFLPQFSSIIIYALMALVLVIRPAGLFGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]