Click here to switch to the map view.

The map label for this gene is yngJ [H]

Identifier: 192289149

GI number: 192289149

Start: 754488

End: 755639

Strand: Reverse

Name: yngJ [H]

Synonym: Rpal_0719

Alternate gene names: 192289149

Gene position: 755639-754488 (Counterclockwise)

Preceding gene: 192289150

Following gene: 192289148

Centisome position: 13.16

GC content: 67.88

Gene sequence:

>1152_bases
ATGAATCCATATTTGAACGAAGACCTCGTGGCGCTGGCTGCGCAGGCGCGGCGGTTCGCTGCTGACCGGATCGCGCCGGG
ATATCAGGAGCGAGACCGGACGCGGGTGCTCGACCGCGGCTTGATGAAGGCCATGGGCGAGATGGGCTTCATCGCTCCGG
AATTGCCGGAAGCGTGCGGGGGGCTCGGCATGGGCAGCCTCGCAGCCGGCGTGATCCACGAAGAGATCGCGCGCGCCGAC
CTCAGCATGTCCTACGTCAATCTGCTCGCTTCGCTGAACGGCCAGATCCTGTCGCAGCACGGGCGACCCGAGATCGTGCA
GCCGTGGCTGGCGAAGCTGATCGGCGGCGAGGCACTGTTCGCGATCGCGTTGACCGAGCCCCGGGGCGGCTCGGATGCGG
CCAACCTGCGTCTGCGGATCGAGCGCGACGGCGACGACTACATCGTCAACGGCGAGAAGACTTCGATCTCCGCAGCCGAT
CAGGCGGATGCGGCGGTAGTGTTCGGCCGCACCGGCTCGATCGACGCCGGCGCACATGGCGTCACCGCGCTGCTGATTCC
GATGGACCTGCCCGGCATCACCCGCAACAGGTTCGACTGCCACGGCCAGCGTGCGATCGGCCGCGGCTCGCTGTTTTTCG
AGAACGTTCGCGTCCCGGCCGCGCATCGGCTCGGCGACGAGAACAAAGGTTTCGTCCAGGTGATGCAGGGCTTCGATTTC
TCCCGCGCGCTGATCGGCCTGCAGGTGCTCGCCGTCGCGCGCGTCGCACTCGAGGAGACCTGGGCGCATGTCGCGGAGCG
GCAGGCGTTCGGCAAACCGCTGTCGGCGTTTCAGGGCGTGTCGCATCCGCTCGCTGACCTCGACACCCAGGTCGAGGCCG
CGCGTCTGCTGTGCCTGCAGGCGCTTTGGCTAAAGGACCACGGCGCCCCGCACAGCGCCGAGGCCGCGATGTGCAAATGG
TGGGCGCCGAAGCTCGCTTACGACGTGATCCATCAATGCCTGCTGATGCACGGCCACGGTGGCTACGACCGCGGCCCGAT
GGAGCAGCGGCTGCGCGACGTGCTCGGCTTCCAGATCGGCGACGGCACCGCGCAAATCATGAAGACGATCATCGCGCGCC
ACCGGGCCGGCCGCGCCGCAGTGCCGGCCTGA

Upstream 100 bases:

>100_bases
AAGCGCAAACCCGAGTTCCGCAAGTACATCAAATAATTGCTCTCCGCCGACGAACGGCGCCGGCAACGCCCGGCGCTCGA
ATTCTCAAGGAGGGCGAGGC

Downstream 100 bases:

>100_bases
ACGGAGGCGCCGCCCGACATTTCGCGTCCATAACGAACAACTAATCCGGGGGAAACATGGAGTTCGACGCCGTTCTGCTG
CCGCCACGCCGCGCCGCGAG

Product: cyclohexanecarboxyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MNPYLNEDLVALAAQARRFAADRIAPGYQERDRTRVLDRGLMKAMGEMGFIAPELPEACGGLGMGSLAAGVIHEEIARAD
LSMSYVNLLASLNGQILSQHGRPEIVQPWLAKLIGGEALFAIALTEPRGGSDAANLRLRIERDGDDYIVNGEKTSISAAD
QADAAVVFGRTGSIDAGAHGVTALLIPMDLPGITRNRFDCHGQRAIGRGSLFFENVRVPAAHRLGDENKGFVQVMQGFDF
SRALIGLQVLAVARVALEETWAHVAERQAFGKPLSAFQGVSHPLADLDTQVEAARLLCLQALWLKDHGAPHSAEAAMCKW
WAPKLAYDVIHQCLLMHGHGGYDRGPMEQRLRDVLGFQIGDGTAQIMKTIIARHRAGRAAVPA

Sequences:

>Translated_383_residues
MNPYLNEDLVALAAQARRFAADRIAPGYQERDRTRVLDRGLMKAMGEMGFIAPELPEACGGLGMGSLAAGVIHEEIARAD
LSMSYVNLLASLNGQILSQHGRPEIVQPWLAKLIGGEALFAIALTEPRGGSDAANLRLRIERDGDDYIVNGEKTSISAAD
QADAAVVFGRTGSIDAGAHGVTALLIPMDLPGITRNRFDCHGQRAIGRGSLFFENVRVPAAHRLGDENKGFVQVMQGFDF
SRALIGLQVLAVARVALEETWAHVAERQAFGKPLSAFQGVSHPLADLDTQVEAARLLCLQALWLKDHGAPHSAEAAMCKW
WAPKLAYDVIHQCLLMHGHGGYDRGPMEQRLRDVLGFQIGDGTAQIMKTIIARHRAGRAAVPA
>Mature_383_residues
MNPYLNEDLVALAAQARRFAADRIAPGYQERDRTRVLDRGLMKAMGEMGFIAPELPEACGGLGMGSLAAGVIHEEIARAD
LSMSYVNLLASLNGQILSQHGRPEIVQPWLAKLIGGEALFAIALTEPRGGSDAANLRLRIERDGDDYIVNGEKTSISAAD
QADAAVVFGRTGSIDAGAHGVTALLIPMDLPGITRNRFDCHGQRAIGRGSLFFENVRVPAAHRLGDENKGFVQVMQGFDF
SRALIGLQVLAVARVALEETWAHVAERQAFGKPLSAFQGVSHPLADLDTQVEAARLLCLQALWLKDHGAPHSAEAAMCKW
WAPKLAYDVIHQCLLMHGHGGYDRGPMEQRLRDVLGFQIGDGTAQIMKTIIARHRAGRAAVPA

Specific function: Catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA. [C]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=364, Percent_Identity=34.0659340659341, Blast_Score=188, Evalue=8e-48,
Organism=Homo sapiens, GI4501857, Length=360, Percent_Identity=30.8333333333333, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI4501859, Length=377, Percent_Identity=29.973474801061, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI187960098, Length=375, Percent_Identity=30.4, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI4557231, Length=375, Percent_Identity=30.4, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI226958412, Length=376, Percent_Identity=30.3191489361702, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI226958414, Length=336, Percent_Identity=30.6547619047619, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI7656849, Length=376, Percent_Identity=29.7872340425532, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI21361497, Length=344, Percent_Identity=30.8139534883721, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI76496475, Length=388, Percent_Identity=26.8041237113402, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4557235, Length=388, Percent_Identity=26.8041237113402, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4503943, Length=385, Percent_Identity=25.974025974026, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI38505218, Length=324, Percent_Identity=27.7777777777778, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI7669494, Length=342, Percent_Identity=26.9005847953216, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI48976061, Length=330, Percent_Identity=28.1818181818182, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI211971008, Length=330, Percent_Identity=28.1818181818182, Blast_Score=94, Evalue=2e-19,
Organism=Escherichia coli, GI1786223, Length=342, Percent_Identity=26.9005847953216, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI87081958, Length=380, Percent_Identity=25.2631578947368, Blast_Score=118, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17570075, Length=384, Percent_Identity=32.03125, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=31.989247311828, Blast_Score=181, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=29.8387096774194, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17538396, Length=375, Percent_Identity=28.8, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17534899, Length=377, Percent_Identity=28.6472148541114, Blast_Score=157, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI17569725, Length=380, Percent_Identity=28.1578947368421, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17533517, Length=372, Percent_Identity=29.8387096774194, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI71990804, Length=296, Percent_Identity=32.4324324324324, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17551932, Length=380, Percent_Identity=30.5263157894737, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17505929, Length=343, Percent_Identity=30.0291545189504, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71982178, Length=276, Percent_Identity=27.536231884058, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71985184, Length=352, Percent_Identity=26.1363636363636, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17562446, Length=305, Percent_Identity=31.1475409836066, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17534353, Length=379, Percent_Identity=24.5382585751979, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17531909, Length=235, Percent_Identity=28.936170212766, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI32563615, Length=226, Percent_Identity=28.7610619469027, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=308, Percent_Identity=25.6493506493506, Blast_Score=89, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17531913, Length=176, Percent_Identity=28.4090909090909, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24646207, Length=372, Percent_Identity=34.4086021505376, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI21356377, Length=374, Percent_Identity=33.1550802139037, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24666513, Length=373, Percent_Identity=30.5630026809651, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24660351, Length=377, Percent_Identity=30.5039787798408, Blast_Score=159, Evalue=2e-39,
Organism=Drosophila melanogaster, GI21355753, Length=380, Percent_Identity=29.7368421052632, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI281363737, Length=353, Percent_Identity=27.4787535410765, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI19920834, Length=383, Percent_Identity=26.6318537859008, Blast_Score=101, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: 1.3.99.-

Molecular weight: Translated: 41360; Mature: 41360

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYLNEDLVALAAQARRFAADRIAPGYQERDRTRVLDRGLMKAMGEMGFIAPELPEACG
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
GLGMGSLAAGVIHEEIARADLSMSYVNLLASLNGQILSQHGRPEIVQPWLAKLIGGEALF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCEEE
AIALTEPRGGSDAANLRLRIERDGDDYIVNGEKTSISAADQADAAVVFGRTGSIDAGAHG
EEEEECCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
VTALLIPMDLPGITRNRFDCHGQRAIGRGSLFFENVRVPAAHRLGDENKGFVQVMQGFDF
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCHHHHHHCCCH
SRALIGLQVLAVARVALEETWAHVAERQAFGKPLSAFQGVSHPLADLDTQVEAARLLCLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
ALWLKDHGAPHSAEAAMCKWWAPKLAYDVIHQCLLMHGHGGYDRGPMEQRLRDVLGFQIG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCEECC
DGTAQIMKTIIARHRAGRAAVPA
CCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNPYLNEDLVALAAQARRFAADRIAPGYQERDRTRVLDRGLMKAMGEMGFIAPELPEACG
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
GLGMGSLAAGVIHEEIARADLSMSYVNLLASLNGQILSQHGRPEIVQPWLAKLIGGEALF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCEEE
AIALTEPRGGSDAANLRLRIERDGDDYIVNGEKTSISAADQADAAVVFGRTGSIDAGAHG
EEEEECCCCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
VTALLIPMDLPGITRNRFDCHGQRAIGRGSLFFENVRVPAAHRLGDENKGFVQVMQGFDF
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCHHHHHHCCCH
SRALIGLQVLAVARVALEETWAHVAERQAFGKPLSAFQGVSHPLADLDTQVEAARLLCLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
ALWLKDHGAPHSAEAAMCKWWAPKLAYDVIHQCLLMHGHGGYDRGPMEQRLRDVLGFQIG
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCEECC
DGTAQIMKTIIARHRAGRAAVPA
CCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-CH group of donors; With other acceptors [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]