| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is yieH [H]
Identifier: 192288884
GI number: 192288884
Start: 488867
End: 489526
Strand: Reverse
Name: yieH [H]
Synonym: Rpal_0453
Alternate gene names: 192288884
Gene position: 489526-488867 (Counterclockwise)
Preceding gene: 192288885
Following gene: 192288883
Centisome position: 8.52
GC content: 64.55
Gene sequence:
>660_bases GTGACTCCCGAACTTGTTATTTTCGATTGTGACGGTGTCCTGGTCGACAGTGAGCTGATCTCCTGTCGGATTCACGCCGA GACGCTGACCCGCTACGGCTATCCGATCACGCCGGACCAAGTCGCGGCGCGCTTCCTCGGCCGTTCGGGCCGCGAAGCCC GGCGCGAGATCGAAGCCGAGATTGGCCGGCGCTTCGCCGACGACATCGAAGCAAACCTGCTCGACGCGCTGCTGCGCGCT TTCGCCGAAACGTTGCAGCCGATCCCATTCGTCACCGACGCTCTCGACACGCTTGGACGACCGTTCTGCGTCGCCTCGAG CGGCACGCTCGATCGCATCGGGGTGGCGCTGACCCATGCCGGCCTGCATGCCCGGTTCGCCCCGCATCTGTTTTCGGCCC AGCAGGTCGCGCACGGCAAACCGGCGCCCGACCTGTTCCTGTTCGCGGCGGCCCAGATGGGCGCAGCCCCGGAGCGCTGC GTGGTGATCGAAGACAGCGTGCCCGGGGTGCTGGGTGCGAAAGCGGCCGGCATGACCGTGCTCGGTTTTCACGGCGGCAG TCATTGCACCGATGCTACTGCCGCCGCACTGGCCGCTGCCGGGGCCGACCGCTGTTTTGACGACATGAGACAATTAACTG AAATAATTGAAGAAATTTAG
Upstream 100 bases:
>100_bases CGATAAGTCCTGAGCTGCAGCGCGAACTGACGCATCTGCCGATCCGCCGCGAGCTCACCGGCTCGCGGCGTATTAGTTTA AACTGCAGCCGGCCGCAGAT
Downstream 100 bases:
>100_bases ACGTCCGGCGGAGCGGACGCGGCAAATCGCCGGTCGCGGCTGGATTTCGTCGGGTTTCGCCTATAAGTGACGGTAACGCG CTGGAACACGCGCGTTTTTT
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTPELVIFDCDGVLVDSELISCRIHAETLTRYGYPITPDQVAARFLGRSGREARREIEAEIGRRFADDIEANLLDALLRA FAETLQPIPFVTDALDTLGRPFCVASSGTLDRIGVALTHAGLHARFAPHLFSAQQVAHGKPAPDLFLFAAAQMGAAPERC VVIEDSVPGVLGAKAAGMTVLGFHGGSHCTDATAAALAAAGADRCFDDMRQLTEIIEEI
Sequences:
>Translated_219_residues MTPELVIFDCDGVLVDSELISCRIHAETLTRYGYPITPDQVAARFLGRSGREARREIEAEIGRRFADDIEANLLDALLRA FAETLQPIPFVTDALDTLGRPFCVASSGTLDRIGVALTHAGLHARFAPHLFSAQQVAHGKPAPDLFLFAAAQMGAAPERC VVIEDSVPGVLGAKAAGMTVLGFHGGSHCTDATAAALAAAGADRCFDDMRQLTEIIEEI >Mature_218_residues TPELVIFDCDGVLVDSELISCRIHAETLTRYGYPITPDQVAARFLGRSGREARREIEAEIGRRFADDIEANLLDALLRAF AETLQPIPFVTDALDTLGRPFCVASSGTLDRIGVALTHAGLHARFAPHLFSAQQVAHGKPAPDLFLFAAAQMGAAPERCV VIEDSVPGVLGAKAAGMTVLGFHGGSHCTDATAAALAAAGADRCFDDMRQLTEIIEEI
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=186, Percent_Identity=31.1827956989247, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1789046, Length=174, Percent_Identity=31.6091954022989, Blast_Score=74, Evalue=8e-15, Organism=Escherichia coli, GI87082080, Length=183, Percent_Identity=32.2404371584699, Blast_Score=62, Evalue=3e-11, Organism=Drosophila melanogaster, GI116008157, Length=186, Percent_Identity=30.6451612903226, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23345; Mature: 23214
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPELVIFDCDGVLVDSELISCRIHAETLTRYGYPITPDQVAARFLGRSGREARREIEAE CCCCEEEEECCCEEECHHHHHEEHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHH IGRRFADDIEANLLDALLRAFAETLQPIPFVTDALDTLGRPFCVASSGTLDRIGVALTHA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHC GLHARFAPHLFSAQQVAHGKPAPDLFLFAAAQMGAAPERCVVIEDSVPGVLGAKAAGMTV CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCEEE LGFHGGSHCTDATAAALAAAGADRCFDDMRQLTEIIEEI EEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TPELVIFDCDGVLVDSELISCRIHAETLTRYGYPITPDQVAARFLGRSGREARREIEAE CCCEEEEECCCEEECHHHHHEEHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHH IGRRFADDIEANLLDALLRAFAETLQPIPFVTDALDTLGRPFCVASSGTLDRIGVALTHA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHC GLHARFAPHLFSAQQVAHGKPAPDLFLFAAAQMGAAPERCVVIEDSVPGVLGAKAAGMTV CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCEEE LGFHGGSHCTDATAAALAAAGADRCFDDMRQLTEIIEEI EEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]