| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is phoH [H]
Identifier: 192288882
GI number: 192288882
Start: 486294
End: 487349
Strand: Reverse
Name: phoH [H]
Synonym: Rpal_0451
Alternate gene names: 192288882
Gene position: 487349-486294 (Counterclockwise)
Preceding gene: 192288883
Following gene: 192288881
Centisome position: 8.48
GC content: 66.38
Gene sequence:
>1056_bases TTGGTCAAAAGCGCACCGGAATCGTCTTCATTCGTTTCCCGCCGCAAACCCGATCGCGACAGCTTGAACCCGCCTGAAAC CCAGGTCGTCATCGATTTCGACGACAACCGTGCCGCCTCCGCTCTGGTCGGTCCCTACGGCCAGAACCTCGCTCAGATCG AGCGCAGGCTCAGCGTGGTGGTGGACTCGCGCGGCAACCACATCACCATCGGCGGCTCTCGCGAGGGCTGCGATGCGGCA CGGCGCGTGCTGGAAACGCTGTATGCCCAGGCGGTGTCAGGCCACGATCTGGTGCAGGGCGACGTCGAGGGCGCGATCCG CGCCGTGATCGCCCAGGGCTCGCTGTTCGAATTCGACACCAAGCAGCCCTCCGCCACCGCGTTCGAGGCGATCAACCTGC GCAAGCGCCCGGTGCGGGCTCGCACCGCCGCGCAGGACTCCTACATCCGCGCGCTGAAGCGCCACGAGTTGGTGTTCGGC GTCGGCCCGGCCGGCACCGGCAAGACCTGGCTGGCGGTGGCGCACGCCGCGCAGCTGTTCGAGCGCAAGGAAGTCGACCG CATCATCCTGTCGCGGCCCGCGGTCGAAGCCGGCGAACGGCTCGGCTTTTTGCCCGGTGACCTGCGCGAGAAGGTCGATC CTTACTTACGGCCGATCTACGATGCGCTGTACGATCTGATGGATGCCCGGATCGTCGAGCGCGCGCTGCAGTCCGGCGAA ATCGAAATCGCCCCCCTGGCGTTCATGCGCGGCCGCACCCTGACCAACGCGGCGATCATCCTCGACGAAGCGCAGAACAC CACGTCGATGCAGATGAAAATGTTTCTCACTCGTCTCGGCGAGAACAGCCGGATGATCATCACCGGCGACCCGAGCCAGG TCGACCTGCCGAACGGCCAGACGTCGGGCCTGGCCGAAGCGGCCCGGCTGCTATCCGGCGTCGAGGGCATCGCGCAGGTG CAATTCAGGGCCGAGGACGTGATCCGGCACGAATTGGTGGCGCGGATCGTCGCCGCCTACGAAGGAGCGCCGTCCCCGGC GAATGGTAAGTCGTGA
Upstream 100 bases:
>100_bases CCGCGTCGATAGCCTCGAACGCTACAGTCTGCTTGGCGAACTCGCATCCGCAACCTCCCGGCCGGCCGATGCGATGGCCG CCACAGGAGCCTGAGCCCCC
Downstream 100 bases:
>100_bases TGTCGCAACCACGCCCTGGGCGCCGCCCCGATTGCAACGGGACGGACCCGGATAGTAATTTTGCTTCGATGACCCACAGT GCTCGTCCTTTCACCGAAGT
Product: PhoH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MVKSAPESSSFVSRRKPDRDSLNPPETQVVIDFDDNRAASALVGPYGQNLAQIERRLSVVVDSRGNHITIGGSREGCDAA RRVLETLYAQAVSGHDLVQGDVEGAIRAVIAQGSLFEFDTKQPSATAFEAINLRKRPVRARTAAQDSYIRALKRHELVFG VGPAGTGKTWLAVAHAAQLFERKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARIVERALQSGE IEIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQTSGLAEAARLLSGVEGIAQV QFRAEDVIRHELVARIVAAYEGAPSPANGKS
Sequences:
>Translated_351_residues MVKSAPESSSFVSRRKPDRDSLNPPETQVVIDFDDNRAASALVGPYGQNLAQIERRLSVVVDSRGNHITIGGSREGCDAA RRVLETLYAQAVSGHDLVQGDVEGAIRAVIAQGSLFEFDTKQPSATAFEAINLRKRPVRARTAAQDSYIRALKRHELVFG VGPAGTGKTWLAVAHAAQLFERKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARIVERALQSGE IEIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQTSGLAEAARLLSGVEGIAQV QFRAEDVIRHELVARIVAAYEGAPSPANGKS >Mature_351_residues MVKSAPESSSFVSRRKPDRDSLNPPETQVVIDFDDNRAASALVGPYGQNLAQIERRLSVVVDSRGNHITIGGSREGCDAA RRVLETLYAQAVSGHDLVQGDVEGAIRAVIAQGSLFEFDTKQPSATAFEAINLRKRPVRARTAAQDSYIRALKRHELVFG VGPAGTGKTWLAVAHAAQLFERKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARIVERALQSGE IEIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQTSGLAEAARLLSGVEGIAQV QFRAEDVIRHELVARIVAAYEGAPSPANGKS
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=323, Percent_Identity=45.8204334365325, Blast_Score=275, Evalue=4e-75, Organism=Escherichia coli, GI1787257, Length=206, Percent_Identity=49.5145631067961, Blast_Score=212, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 38215; Mature: 38215
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSAPESSSFVSRRKPDRDSLNPPETQVVIDFDDNRAASALVGPYGQNLAQIERRLSVV CCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHE VDSRGNHITIGGSREGCDAARRVLETLYAQAVSGHDLVQGDVEGAIRAVIAQGSLFEFDT EECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECC KQPSATAFEAINLRKRPVRARTAAQDSYIRALKRHELVFGVGPAGTGKTWLAVAHAAQLF CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHH ERKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARIVERALQSGE HHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IEIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQ EEEEEHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCC TSGLAEAARLLSGVEGIAQVQFRAEDVIRHELVARIVAAYEGAPSPANGKS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVKSAPESSSFVSRRKPDRDSLNPPETQVVIDFDDNRAASALVGPYGQNLAQIERRLSVV CCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHHE VDSRGNHITIGGSREGCDAARRVLETLYAQAVSGHDLVQGDVEGAIRAVIAQGSLFEFDT EECCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECC KQPSATAFEAINLRKRPVRARTAAQDSYIRALKRHELVFGVGPAGTGKTWLAVAHAAQLF CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHH ERKEVDRIILSRPAVEAGERLGFLPGDLREKVDPYLRPIYDALYDLMDARIVERALQSGE HHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IEIAPLAFMRGRTLTNAAIILDEAQNTTSMQMKMFLTRLGENSRMIITGDPSQVDLPNGQ EEEEEHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCC TSGLAEAARLLSGVEGIAQVQFRAEDVIRHELVARIVAAYEGAPSPANGKS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]