| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288855
Identifier: 192288855
GI number: 192288855
Start: 454807
End: 455334
Strand: Reverse
Name: 192288855
Synonym: Rpal_0424
Alternate gene names: NA
Gene position: 455334-454807 (Counterclockwise)
Preceding gene: 192288856
Following gene: 192288854
Centisome position: 7.93
GC content: 62.88
Gene sequence:
>528_bases ATGCTGGATAAACTGCGCCAATTCATCACCGATGTCGTCGCCCCGAGCGCCCCGGATGAGCTGATGCTCGACGACGGCGG CTACCGCCTCGCCGCCACGGCGCTGCTGATCCATGTGATTTCGATCGATGGCGATCCGTCGGAAGTCGAAAAGCAAAAGC TGCATTCATTGCTCGAACAGCGCTTCGGTCTCGATGCCGCAACCGCCACCCGGCTGATCGCCTCGGCGACACTGGTCGAA GGCGAGGCCGTTGACCTTTATCATTTCACGAGCGTGATCATGCGTTCGGTGAATGAGCAGGGCCGGCTGCGGATCGTCGA AATGATGTGGGAGCTGGTGTACGCTGACGGCACCGTCACGGAGTTTGAAGAGAACGTGGTGTGGCGCGCAGCCGATCTGT TGGCGATCTCGACCCGCGACCGCGTCACCCTGCGCCAGAAGGTAGCTGCCGCAGCTCCCGTTGCGCCCGGTGCCGCCCAG GGCGGTACGGCGATGGGGAGTGTCGCCGAGGTCGATCCCGCCAACTAA
Upstream 100 bases:
>100_bases AACCGTCATGGAACTCCCCGGAACCGGGGCAGGATTGCGGGCGTTCCCTTTCCACGCCATAGAGCGACGAGCCGTCGCCC CCATCGAAAGACGAGAGACG
Downstream 100 bases:
>100_bases CCAGCAATGCGGTGAAACCTCGGGTAACGGGAACCCGTACCTGTGTCACACACCTCACCGCATCAGCGTGAGTTTCAGTC CTGCGAGCCGCATGGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLDKLRQFITDVVAPSAPDELMLDDGGYRLAATALLIHVISIDGDPSEVEKQKLHSLLEQRFGLDAATATRLIASATLVE GEAVDLYHFTSVIMRSVNEQGRLRIVEMMWELVYADGTVTEFEENVVWRAADLLAISTRDRVTLRQKVAAAAPVAPGAAQ GGTAMGSVAEVDPAN
Sequences:
>Translated_175_residues MLDKLRQFITDVVAPSAPDELMLDDGGYRLAATALLIHVISIDGDPSEVEKQKLHSLLEQRFGLDAATATRLIASATLVE GEAVDLYHFTSVIMRSVNEQGRLRIVEMMWELVYADGTVTEFEENVVWRAADLLAISTRDRVTLRQKVAAAAPVAPGAAQ GGTAMGSVAEVDPAN >Mature_175_residues MLDKLRQFITDVVAPSAPDELMLDDGGYRLAATALLIHVISIDGDPSEVEKQKLHSLLEQRFGLDAATATRLIASATLVE GEAVDLYHFTSVIMRSVNEQGRLRIVEMMWELVYADGTVTEFEENVVWRAADLLAISTRDRVTLRQKVAAAAPVAPGAAQ GGTAMGSVAEVDPAN
Specific function: Unknown
COG id: COG4103
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18907; Mature: 18907
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKLRQFITDVVAPSAPDELMLDDGGYRLAATALLIHVISIDGDPSEVEKQKLHSLLEQ CHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RFGLDAATATRLIASATLVEGEAVDLYHFTSVIMRSVNEQGRLRIVEMMWELVYADGTVT HHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH EFEENVVWRAADLLAISTRDRVTLRQKVAAAAPVAPGAAQGGTAMGSVAEVDPAN HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDKLRQFITDVVAPSAPDELMLDDGGYRLAATALLIHVISIDGDPSEVEKQKLHSLLEQ CHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RFGLDAATATRLIASATLVEGEAVDLYHFTSVIMRSVNEQGRLRIVEMMWELVYADGTVT HHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHH EFEENVVWRAADLLAISTRDRVTLRQKVAAAAPVAPGAAQGGTAMGSVAEVDPAN HHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA