| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is mnmG [H]
Identifier: 192288727
GI number: 192288727
Start: 316944
End: 318812
Strand: Reverse
Name: mnmG [H]
Synonym: Rpal_0296
Alternate gene names: 192288727
Gene position: 318812-316944 (Counterclockwise)
Preceding gene: 192288728
Following gene: 192288726
Centisome position: 5.55
GC content: 64.63
Gene sequence:
>1869_bases ATGCGCACCTCTTTCGACGTCATCGTCATCGGCGGCGGCCATGCCGGCTGCGAAGCTGCGGCTGCGGCTGCCCGGATCGG CGCGGCTACCGCCCTCGTCACCCATCGTTTCGCCACCGTAGGTGCGATGTCCTGCAATCCGGCGATCGGAGGGCTGGGCA AAGGTCATCTGGTCCGCGAAGTGGATGCCTTGGATGGGCTGATGGGCCGGGTCGCCGACGCCGGCGGCATTCAGTTTCGG ATGCTGAACCGCCGTAAAGGCCCCGCGGTCCGCGGCCCGCGGGCGCAGGCTGATCGCAAGCTGTATGCGGCCGCGATGCA GATCGCGATCCAGGGCTTTCCGAATTTGTCGGTGATCGAAGGGGAGGCCGACGCGCTGCTATGGCAGGACGGCCGTGTGA GCGGCATTCGGCTCGGCGACGGCCGGGAGTTTGCTGCCGCGGCGGTCGTCATTACGACCGGGACCTTTCTGCGCGGCCTC ATTCACCTCGGCGAGCGAAGCTGGCCCGCTGGCCGGATCGACGAGGCCCCAGCGATGGGGCTTTCATCGTCGTTCGAAGC GCTCGGATTTAAGCTCGGTCGCCTCAAAACCGGAACTCCGCCACGTCTGGACGGCCGGACAATCGACTGGAGCGCCGTCG AAATGCAGCCCGGCGATGATCCGGCGGAACCGTTTTCGGTCCTGACGCCGGCAATCACCACGCCGCAGATCGAATGCGGC ATCACCCGGACGACGCCGGCCACCCATGAGGTGATCCGAGCCAATGTGCATCGCTCGCCGATGTATTCAGGACAGATCCA GTCGACTGGGCCGCGTTATTGCCCCTCGATTGAGGACAAGATCGTCAAATTCGGCGATCGCGACGGCCACCAGATCTTCC TGGAGCCGGAAGGGCTTGATGATCCGACCGTCTATCCCAACGGGATCTCAACTTCGCTTCCCGAAGAGGTTCAGCGGGCA ATCCTGAAGACCATTCCGGGGCTGGAGCGAACCGAAATGCTCCGTCCGGGGTACGCGATTGAATACGATCACGTCGACCC GCGGGAGTTGGAGCCGACGCTGCAGACCAAGCGGCTGCGCGGGCTGTTCCTGGCCGGGCAGATCAATGGCACCACCGGTT ATGAAGAGGCGGCAGCCCAGGGTCTGGTCGCTGGGCTCAATGCGGCATTGTCCGCGGGAGGTGGCGATCGGGCGGTGTTC GATCGCGCCGACGGCTACCTCGGCGTGATGATCGACGATCTGGTGACCCGCGGCATCACCGAGCCGTACCGGATGTTTAC CTCCCGGGCCGAGTATCGCCTGACCCTTCGGGCCGACAACGCCGACCAGCGTCTGACCGACAAGGGCCTAGCACTCGGTT GCGTCGGGGTGGAGCGGTCGGCCTTCCATCATGACAAAATGGCCGCACTTTCGGACGCGAAAGCGCTTGCCCAATCGCTG TCGATCACCCCGAACGAAGCAGCCAAGCACGGACTGGCACTGAACCGGGATGGCCAGCGCCGCTCCGCGTTCGATCTGTT GTCCTATCCGGAAATCGAGTGGGCTCAGGTTCGCGCGATATGGCCGGAGCTTGGAAAGGTCGATCCCGCGATCGCGGTGC ATGTCGAGATCGACGCCAAATATCATGTCTATCTGGAGCGCCAGACCGCAGACGTCGAGGCGTTTCGTCGGGATGAAAGT CTCGGGCTTACCGATGTCGATTACGCGGCGGTCCCCGGTCTGTCGAACGAGGCCCGCACGCGGCTGGAGCGGCATCGCCC ACACACCGTCGGGCAGGCGGGTCGGCTCGACGGCATCACGCCAGCGGCCCTCGGAATTCTCGCCGCCTATCTGCGGCGTG AACAACGGAAGCGGAAATCGACGGGGTAG
Upstream 100 bases:
>100_bases GCTCCGCTGTTTCACGTGAAACAGTTCGGTGAGGTTCAGCCGGTATCAAGATCGGCGAACTCGCCTTCAAAGCTCCCCGG AGCTGAGCTACAACCCCACC
Downstream 100 bases:
>100_bases GGTAGCAACCAGCGTTTCACGTGAAACACCTCCACCTCTCGGCTCCGTCGTGTTTCACGTGAAACTCTAGCCGTCGATTG CAGACCGGTGCCGTATTCGG
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MRTSFDVIVIGGGHAGCEAAAAAARIGAATALVTHRFATVGAMSCNPAIGGLGKGHLVREVDALDGLMGRVADAGGIQFR MLNRRKGPAVRGPRAQADRKLYAAAMQIAIQGFPNLSVIEGEADALLWQDGRVSGIRLGDGREFAAAAVVITTGTFLRGL IHLGERSWPAGRIDEAPAMGLSSSFEALGFKLGRLKTGTPPRLDGRTIDWSAVEMQPGDDPAEPFSVLTPAITTPQIECG ITRTTPATHEVIRANVHRSPMYSGQIQSTGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPTVYPNGISTSLPEEVQRA ILKTIPGLERTEMLRPGYAIEYDHVDPRELEPTLQTKRLRGLFLAGQINGTTGYEEAAAQGLVAGLNAALSAGGGDRAVF DRADGYLGVMIDDLVTRGITEPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGVERSAFHHDKMAALSDAKALAQSL SITPNEAAKHGLALNRDGQRRSAFDLLSYPEIEWAQVRAIWPELGKVDPAIAVHVEIDAKYHVYLERQTADVEAFRRDES LGLTDVDYAAVPGLSNEARTRLERHRPHTVGQAGRLDGITPAALGILAAYLRREQRKRKSTG
Sequences:
>Translated_622_residues MRTSFDVIVIGGGHAGCEAAAAAARIGAATALVTHRFATVGAMSCNPAIGGLGKGHLVREVDALDGLMGRVADAGGIQFR MLNRRKGPAVRGPRAQADRKLYAAAMQIAIQGFPNLSVIEGEADALLWQDGRVSGIRLGDGREFAAAAVVITTGTFLRGL IHLGERSWPAGRIDEAPAMGLSSSFEALGFKLGRLKTGTPPRLDGRTIDWSAVEMQPGDDPAEPFSVLTPAITTPQIECG ITRTTPATHEVIRANVHRSPMYSGQIQSTGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPTVYPNGISTSLPEEVQRA ILKTIPGLERTEMLRPGYAIEYDHVDPRELEPTLQTKRLRGLFLAGQINGTTGYEEAAAQGLVAGLNAALSAGGGDRAVF DRADGYLGVMIDDLVTRGITEPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGVERSAFHHDKMAALSDAKALAQSL SITPNEAAKHGLALNRDGQRRSAFDLLSYPEIEWAQVRAIWPELGKVDPAIAVHVEIDAKYHVYLERQTADVEAFRRDES LGLTDVDYAAVPGLSNEARTRLERHRPHTVGQAGRLDGITPAALGILAAYLRREQRKRKSTG >Mature_622_residues MRTSFDVIVIGGGHAGCEAAAAAARIGAATALVTHRFATVGAMSCNPAIGGLGKGHLVREVDALDGLMGRVADAGGIQFR MLNRRKGPAVRGPRAQADRKLYAAAMQIAIQGFPNLSVIEGEADALLWQDGRVSGIRLGDGREFAAAAVVITTGTFLRGL IHLGERSWPAGRIDEAPAMGLSSSFEALGFKLGRLKTGTPPRLDGRTIDWSAVEMQPGDDPAEPFSVLTPAITTPQIECG ITRTTPATHEVIRANVHRSPMYSGQIQSTGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLDDPTVYPNGISTSLPEEVQRA ILKTIPGLERTEMLRPGYAIEYDHVDPRELEPTLQTKRLRGLFLAGQINGTTGYEEAAAQGLVAGLNAALSAGGGDRAVF DRADGYLGVMIDDLVTRGITEPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGVERSAFHHDKMAALSDAKALAQSL SITPNEAAKHGLALNRDGQRRSAFDLLSYPEIEWAQVRAIWPELGKVDPAIAVHVEIDAKYHVYLERQTADVEAFRRDES LGLTDVDYAAVPGLSNEARTRLERHRPHTVGQAGRLDGITPAALGILAAYLRREQRKRKSTG
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=640, Percent_Identity=44.53125, Blast_Score=521, Evalue=1e-148, Organism=Homo sapiens, GI19882217, Length=665, Percent_Identity=42.8571428571429, Blast_Score=506, Evalue=1e-143, Organism=Homo sapiens, GI183227703, Length=680, Percent_Identity=41.9117647058824, Blast_Score=502, Evalue=1e-142, Organism=Escherichia coli, GI2367273, Length=625, Percent_Identity=51.2, Blast_Score=599, Evalue=1e-172, Organism=Caenorhabditis elegans, GI17534255, Length=624, Percent_Identity=43.5897435897436, Blast_Score=496, Evalue=1e-140, Organism=Saccharomyces cerevisiae, GI6321202, Length=625, Percent_Identity=47.68, Blast_Score=558, Evalue=1e-160, Organism=Drosophila melanogaster, GI24658174, Length=631, Percent_Identity=46.9096671949287, Blast_Score=524, Evalue=1e-149,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 67085; Mature: 67085
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSFDVIVIGGGHAGCEAAAAAARIGAATALVTHRFATVGAMSCNPAIGGLGKGHLVRE CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH VDALDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQIAIQGFPNLSVIE HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE GEADALLWQDGRVSGIRLGDGREFAAAAVVITTGTFLRGLIHLGERSWPAGRIDEAPAMG CCCCEEEEECCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCC LSSSFEALGFKLGRLKTGTPPRLDGRTIDWSAVEMQPGDDPAEPFSVLTPAITTPQIECG CCCCHHHHCEECCCCCCCCCCCCCCCEECCEEEEECCCCCCCCCHHHHCCCCCCCCEEEC ITRTTPATHEVIRANVHRSPMYSGQIQSTGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLD EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCC DPTVYPNGISTSLPEEVQRAILKTIPGLERTEMLRPGYAIEYDHVDPRELEPTLQTKRLR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCHHHCCCHHHHHHHC GLFLAGQINGTTGYEEAAAQGLVAGLNAALSAGGGDRAVFDRADGYLGVMIDDLVTRGIT EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEHHHHHHHHHCCC EPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGVERSAFHHDKMAALSDAKALAQSL HHHHHHHCCCEEEEEEEECCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC SITPNEAAKHGLALNRDGQRRSAFDLLSYPEIEWAQVRAIWPELGKVDPAIAVHVEIDAK CCCCCHHHHCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCE YHVYLERQTADVEAFRRDESLGLTDVDYAAVPGLSNEARTRLERHRPHTVGQAGRLDGIT EEEEEECCCCCHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC PAALGILAAYLRREQRKRKSTG HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRTSFDVIVIGGGHAGCEAAAAAARIGAATALVTHRFATVGAMSCNPAIGGLGKGHLVRE CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH VDALDGLMGRVADAGGIQFRMLNRRKGPAVRGPRAQADRKLYAAAMQIAIQGFPNLSVIE HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEE GEADALLWQDGRVSGIRLGDGREFAAAAVVITTGTFLRGLIHLGERSWPAGRIDEAPAMG CCCCEEEEECCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCC LSSSFEALGFKLGRLKTGTPPRLDGRTIDWSAVEMQPGDDPAEPFSVLTPAITTPQIECG CCCCHHHHCEECCCCCCCCCCCCCCCEECCEEEEECCCCCCCCCHHHHCCCCCCCCEEEC ITRTTPATHEVIRANVHRSPMYSGQIQSTGPRYCPSIEDKIVKFGDRDGHQIFLEPEGLD EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCC DPTVYPNGISTSLPEEVQRAILKTIPGLERTEMLRPGYAIEYDHVDPRELEPTLQTKRLR CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCCHHHCCCHHHHHHHC GLFLAGQINGTTGYEEAAAQGLVAGLNAALSAGGGDRAVFDRADGYLGVMIDDLVTRGIT EEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEEHHHHHHHHHCCC EPYRMFTSRAEYRLTLRADNADQRLTDKGLALGCVGVERSAFHHDKMAALSDAKALAQSL HHHHHHHCCCEEEEEEEECCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHC SITPNEAAKHGLALNRDGQRRSAFDLLSYPEIEWAQVRAIWPELGKVDPAIAVHVEIDAK CCCCCHHHHCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCE YHVYLERQTADVEAFRRDESLGLTDVDYAAVPGLSNEARTRLERHRPHTVGQAGRLDGIT EEEEEECCCCCHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC PAALGILAAYLRREQRKRKSTG HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA