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The map label for this gene is gidB [H]

Identifier: 192288726

GI number: 192288726

Start: 316100

End: 316771

Strand: Reverse

Name: gidB [H]

Synonym: Rpal_0295

Alternate gene names: 192288726

Gene position: 316771-316100 (Counterclockwise)

Preceding gene: 192288727

Following gene: 192288725

Centisome position: 5.51

GC content: 61.61

Gene sequence:

>672_bases
ATGCAGCGCGCTGCCAGACCTCTCGTTTCCGTCTCAGACCTCGACGCTGACAAAGCGGCGGCGCTGAAGCTCATCCCAAT
CCCGTCGGCGCTCGAAGCCCGCCTCGATGCCTATGTCGCGCTGCTGCAGCAATGGCAGGCTAAGACTAACCTGGTCGCTC
CCTCGACCCTGCCGCAGCTTTGGACCCGGCACGTCGCGGATTCGCTGCAGCTGGTCAGTCTGATGCCGCATGCCCGGCGA
TGGCTCGACTTCGGATCGGGAGGCGGGTTTCCCGGTGTGGTGCTGGCCTGCGCGATGGCGGACGTCGGTGGACACGTCAC
GTTGGTGGAGAGGATTGCCAAGAAGGCCGCGTTCCTGCGCGAGGCGCTCCGCGTCGCGGGCGCACCGGGCACAGTCGTTC
TCGCGGACATCGGGGATAACGTGGATAGATTCCCACAAGCCCTCGATTGCATCACCGCCCGTGCGGTCGCTCCGCTACAC
CAGCTCATCGGTTTTGCCGAACCGCTGATGACCCCCGGAATCACAAAGGCGTTGTTCCTGAAAGGTCAAGATGTAGATGC
AGAATTGACGGAATCTACTAAATATTGGAAATTCCAGCCCAAGCTGCATGCCAGCTTGACCGGTGGCCAGGGCTGGATCG
TCGAAATCGACCACATCGAACGACGCACATAA

Upstream 100 bases:

>100_bases
GTCGATTGCAGACCGGTGCCGTATTCGGTGGTCGGAATCGGTTTGCCGAGAATATAATCTAAAAAGGCCTCTACGGCCGT
CTCCCCCGCAGTGAAGTTCC

Downstream 100 bases:

>100_bases
CGCCACCGCGAGCCAAAAGAACCTGCCATGACCGTAATTGACGAGATTTATCAAGGGGATAGGGCGAATTCAGAGCCCGG
GCGTCCGCGCATCATCGCAC

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQRAARPLVSVSDLDADKAAALKLIPIPSALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLMPHARR
WLDFGSGGGFPGVVLACAMADVGGHVTLVERIAKKAAFLREALRVAGAPGTVVLADIGDNVDRFPQALDCITARAVAPLH
QLIGFAEPLMTPGITKALFLKGQDVDAELTESTKYWKFQPKLHASLTGGQGWIVEIDHIERRT

Sequences:

>Translated_223_residues
MQRAARPLVSVSDLDADKAAALKLIPIPSALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLMPHARR
WLDFGSGGGFPGVVLACAMADVGGHVTLVERIAKKAAFLREALRVAGAPGTVVLADIGDNVDRFPQALDCITARAVAPLH
QLIGFAEPLMTPGITKALFLKGQDVDAELTESTKYWKFQPKLHASLTGGQGWIVEIDHIERRT
>Mature_223_residues
MQRAARPLVSVSDLDADKAAALKLIPIPSALEARLDAYVALLQQWQAKTNLVAPSTLPQLWTRHVADSLQLVSLMPHARR
WLDFGSGGGFPGVVLACAMADVGGHVTLVERIAKKAAFLREALRVAGAPGTVVLADIGDNVDRFPQALDCITARAVAPLH
QLIGFAEPLMTPGITKALFLKGQDVDAELTESTKYWKFQPKLHASLTGGQGWIVEIDHIERRT

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: =2.1.1.170 [H]

Molecular weight: Translated: 24098; Mature: 24098

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRAARPLVSVSDLDADKAAALKLIPIPSALEARLDAYVALLQQWQAKTNLVAPSTLPQL
CCCCCCCCCCHHCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WTRHVADSLQLVSLMPHARRWLDFGSGGGFPGVVLACAMADVGGHVTLVERIAKKAAFLR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EALRVAGAPGTVVLADIGDNVDRFPQALDCITARAVAPLHQLIGFAEPLMTPGITKALFL
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEE
KGQDVDAELTESTKYWKFQPKLHASLTGGQGWIVEIDHIERRT
CCCCCCCHHHCCCCEEEECCCEEEEEECCCEEEEEECCCCCCC
>Mature Secondary Structure
MQRAARPLVSVSDLDADKAAALKLIPIPSALEARLDAYVALLQQWQAKTNLVAPSTLPQL
CCCCCCCCCCHHCCCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WTRHVADSLQLVSLMPHARRWLDFGSGGGFPGVVLACAMADVGGHVTLVERIAKKAAFLR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EALRVAGAPGTVVLADIGDNVDRFPQALDCITARAVAPLHQLIGFAEPLMTPGITKALFL
HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEE
KGQDVDAELTESTKYWKFQPKLHASLTGGQGWIVEIDHIERRT
CCCCCCCHHHCCCCEEEECCCEEEEEECCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA