Click here to switch to the map view.

The map label for this gene is atpH [H]

Identifier: 192288607

GI number: 192288607

Start: 189192

End: 189752

Strand: Reverse

Name: atpH [H]

Synonym: Rpal_0174

Alternate gene names: 192288607

Gene position: 189752-189192 (Counterclockwise)

Preceding gene: 192288609

Following gene: 192288606

Centisome position: 3.3

GC content: 62.21

Gene sequence:

>561_bases
GTGGCATCTGAAGATCCATCGGTTTCCGGAGTCTCCGGTCGTTACGCGACCGCTTTGTTTGAACTGGCCCGCGACGAGAA
ATCCATCGATGCGGTGACGGCCGATCTGGACAAGTTCAGCGCCATGCTGGCGGGCAGCCCCGATCTGGTTCGCCTGGTCC
GCAGTCCGGTGTTCGCCTCCGAGGTGCAGGGCAAGGCGCTGGCCGCAGTGCTCGACAAGGCGGGCATCACTGGCATCAGC
GCCAATTTTCTGAAAGTGCTCGCGGCCAACCGCCGGCTGTTCGTGGTCGCAGACGTGATCCGCGCCTATCGCGCGCTGGT
CGCCAAGTTCAAGGGTGAGGCGACCGCCGACGTGACCGTGGCCGAGAAGCTCAGCGACAAGAATCTCGAAGCGCTGAAGG
CGGCGCTGAAGTCGGTGACCGGCAAGGACGTCGCCCTCAATATCAATGTCGATCCGGCGATCATCGGCGGGCTTGTCGTC
AAGCTCGGTAGCCGCATGGTCGACAGTTCGCTCCGCACCAAACTCAATTCGATCAAGCACGCGATGAAAGAGGCAGGCTG
A

Upstream 100 bases:

>100_bases
AAATCGAAGTCCAGCTTGAATTCCAAGGGCTTAAATCGGGGGCGCCGCTTCGTGGCGACGGTTTTTTCCTTGGCCATTTG
ACAGCAAGAAGAGCGCGCTC

Downstream 100 bases:

>100_bases
TGGACATCCGCGCCGCGGAAATTTCCGCGATCCTCAAGGACCAGATCAAGAATTTCGGCCAGGAAGCCGAAGTCTCCGAG
GTCGGACAGGTGTTGTCCGT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MASEDPSVSGVSGRYATALFELARDEKSIDAVTADLDKFSAMLAGSPDLVRLVRSPVFASEVQGKALAAVLDKAGITGIS
ANFLKVLAANRRLFVVADVIRAYRALVAKFKGEATADVTVAEKLSDKNLEALKAALKSVTGKDVALNINVDPAIIGGLVV
KLGSRMVDSSLRTKLNSIKHAMKEAG

Sequences:

>Translated_186_residues
MASEDPSVSGVSGRYATALFELARDEKSIDAVTADLDKFSAMLAGSPDLVRLVRSPVFASEVQGKALAAVLDKAGITGIS
ANFLKVLAANRRLFVVADVIRAYRALVAKFKGEATADVTVAEKLSDKNLEALKAALKSVTGKDVALNINVDPAIIGGLVV
KLGSRMVDSSLRTKLNSIKHAMKEAG
>Mature_185_residues
ASEDPSVSGVSGRYATALFELARDEKSIDAVTADLDKFSAMLAGSPDLVRLVRSPVFASEVQGKALAAVLDKAGITGISA
NFLKVLAANRRLFVVADVIRAYRALVAKFKGEATADVTVAEKLSDKNLEALKAALKSVTGKDVALNINVDPAIIGGLVVK
LGSRMVDSSLRTKLNSIKHAMKEAG

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Homo sapiens, GI4502303, Length=180, Percent_Identity=31.1111111111111, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71984717, Length=181, Percent_Identity=31.4917127071823, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71984710, Length=181, Percent_Identity=31.4917127071823, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6320504, Length=181, Percent_Identity=30.939226519337, Blast_Score=81, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24647054, Length=171, Percent_Identity=36.2573099415205, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24647056, Length=98, Percent_Identity=39.7959183673469, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711
- InterPro:   IPR020781 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19514; Mature: 19383

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASEDPSVSGVSGRYATALFELARDEKSIDAVTADLDKFSAMLAGSPDLVRLVRSPVFAS
CCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHH
EVQGKALAAVLDKAGITGISANFLKVLAANRRLFVVADVIRAYRALVAKFKGEATADVTV
HHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AEKLSDKNLEALKAALKSVTGKDVALNINVDPAIIGGLVVKLGSRMVDSSLRTKLNSIKH
HHHHCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMKEAG
HHHHCC
>Mature Secondary Structure 
ASEDPSVSGVSGRYATALFELARDEKSIDAVTADLDKFSAMLAGSPDLVRLVRSPVFAS
CCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHH
EVQGKALAAVLDKAGITGISANFLKVLAANRRLFVVADVIRAYRALVAKFKGEATADVTV
HHCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
AEKLSDKNLEALKAALKSVTGKDVALNINVDPAIIGGLVVKLGSRMVDSSLRTKLNSIKH
HHHHCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMKEAG
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA