| Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011004 |
| Length | 5,744,041 |
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The map label for this gene is 192288525
Identifier: 192288525
GI number: 192288525
Start: 101934
End: 102152
Strand: Reverse
Name: 192288525
Synonym: Rpal_0092
Alternate gene names: NA
Gene position: 102152-101934 (Counterclockwise)
Preceding gene: 192288526
Following gene: 192288524
Centisome position: 1.78
GC content: 63.47
Gene sequence:
>219_bases ATGTTGAAAATCATCGGTCCGCTCGTTTGCCTCACCCTGATCGCCGGCGCCGCGCAGGCGCAGGAGCGTCGCCCCGATCC TGGCTGCGGCCGGGATGTGTCGCGTCTGTGCCGAGCGGTGATGAACGAGTCCGACGGGGCGATTCTGAATTGCCTGCAGC AGCATCGCGCCAAGCTCAGCGCCAAATGCGCCAAGGTGCTGACTGACAACGGTCAGTAA
Upstream 100 bases:
>100_bases CAGCGGCGTAGCGGTCGTCACATGACCGCTACGGGAACGGTTGCGCACACATCGCATTGATGCAGCTGAACAGGCTCAGC TCTGATTTTGGATATCAAGC
Downstream 100 bases:
>100_bases CAGGTCGATTTACTCCGTCATCCGTCCATGCCCGCGCCTGTCGCGGACCAGAATGTCAAAGACGCGCCCGACCATGAGGC CGGACGAAATCGACCCCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 72
Protein sequence:
>72_residues MLKIIGPLVCLTLIAGAAQAQERRPDPGCGRDVSRLCRAVMNESDGAILNCLQQHRAKLSAKCAKVLTDNGQ
Sequences:
>Translated_72_residues MLKIIGPLVCLTLIAGAAQAQERRPDPGCGRDVSRLCRAVMNESDGAILNCLQQHRAKLSAKCAKVLTDNGQ >Mature_72_residues MLKIIGPLVCLTLIAGAAQAQERRPDPGCGRDVSRLCRAVMNESDGAILNCLQQHRAKLSAKCAKVLTDNGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7689; Mature: 7689
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 6.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIIGPLVCLTLIAGAAQAQERRPDPGCGRDVSRLCRAVMNESDGAILNCLQQHRAKLS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AKCAKVLTDNGQ HHHHHHHHCCCC >Mature Secondary Structure MLKIIGPLVCLTLIAGAAQAQERRPDPGCGRDVSRLCRAVMNESDGAILNCLQQHRAKLS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH AKCAKVLTDNGQ HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA