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The map label for this gene is 192288450

Identifier: 192288450

GI number: 192288450

Start: 18559

End: 19440

Strand: Reverse

Name: 192288450

Synonym: Rpal_0017

Alternate gene names: NA

Gene position: 19440-18559 (Counterclockwise)

Preceding gene: 192288451

Following gene: 192288449

Centisome position: 0.34

GC content: 63.61

Gene sequence:

>882_bases
ATGGCTGACCATGCACATCACGGCGAAATCGACAAAGTCACCGGCACGGCCACGACCGGCCACGAGTGGGACGGCATTCA
GGAACTGAACACGCCGCTGCCGCGGTGGTGGATCTGGACCTTCTACGCCACCATCATCTGGTCGATCGGCTACTTCATCG
TCTATCCGGCGTGGCCGCTGATGAACGGCTACACCCACGGCCTGTTCGGTTACTCCTCGCGCGCCGAACTCGACGTCGAT
CTCGCCAAGCTCAACCAGGTTCGCGGCGAGAAGATGCAGGCGCTGGCGACCGCCTCGCTCGAGGAGATCGAGAAGAACCC
GGCGCTACTCGCTCTGGCTCGCGCCAAGGGCAAGGTGGTGTTCGGCGACAACTGTGCCCCGTGCCACGGCTCGGGCGCTG
CCGGCGGCAAGGGCTTCCCGAACCTCAACGACGACGACTGGCTGTGGGGCGGCTCCCTCGAGCAGATCGAAAAGACCATC
AAGTACGGTGCGCGCTCCGGTAACGACGAAGGCCACATGGGCAACATGCTGGCATTCGGCAAGGACGGCACTCTGACCAA
GGATCAGATCGTTCAGGTCGCTAACTTCGTTCGTTCGCTGTCGGGCCAGTCGACCCGGCCGGGCGTCGATCTGGCGGCCG
GCAAGCAGATCTTCGCGGAGAACTGCGTTGCCTGTCACGGTGAAGACGCCAAGGGCAATCCCGAACTTGGTGCGCCCAAC
CTGACGGATAAGATCTGGCTGTACGGTGGTGACGAAGCCACCATCATCGAGACGATCACCAACGGCCGCGGCGGCGTGAT
GCCGGCGTGGATCGGTCGCCTCGATCCCACCACCATCAAGGCGATGGCGGTGTACGTCCACTCGCTCGGCGGCGGCAAAT
AG

Upstream 100 bases:

>100_bases
GCCATCTTCGTCGCCATCGTGGTGTATGCGCTCTGGCCGAAAAACAAAGAGGCGTTCGACGAGGCCGCCCAGATGCCGCT
TCGAGAGGACTGAGACGACC

Downstream 100 bases:

>100_bases
CCGACGCTCGCGGGCGCGCAGAACCTCGTGTGTTGGGGGACACGCGAGGTTGTGATCTGCGCGCCCGGAATTGAGCTTGC
GCTCGACGATAGAAGAAGTG

Product: cytochrome C oxidase, cbb3-type subunit III

Products: ferricytochrome c; H2O

Alternate protein names: Cbb3-Type Cytochrome C Oxidase Subunit III; Cytochrome C Class I; Cb-Type Cytochrome C Oxidase Subunit III; Cytochrome-C Oxidase FixP Chain; Cytochrome C Oxidase Subunit CcoP; Cytochrome C; Cytochrome-Cbb3 Oxidase Subunit III; Cytochrome C Oxidase Subunit; Cytochrome C Oxidase; Cytochrome C Oxidase Subunit III; Cytochrome-C Oxidase Subunit III; Cytochrome C Mono- And Diheme Variant; Cytochrome C Subfamily; Cytochrome C Oxidase CcoP Subunit; FixP2 Diheme C-Type Cytochrome; Class I Cytochrome C; Cytochrome C Mono- And Diheme Variants; FixP Protein; Cytochrome Oxidase Component Cytochrome C Protein; Cytochrome C Oxidase Cbb3-Type Di-Heme Subunit III; FixP3 Cytochrome C Oxidase Membrane Anchored Subunit; Gluconate 2-Dehydrogenase; Cytochrome Cbb3 Oxidase Diheme Subunit Membrane-Bound CcoP; Cbb3-Type Cytochrome C Oxidase Subunit CcoP; Membrane-Anchored Cbb3 Cytochrome Oxidase Subunit; Cytochrome C Oxidase Transmembrane Protein; Cytochrome C Oxidase Diheme Subunit Membrane-Bound; Cytochrome C Oxidase Protein FixP Chain; Cbb3 Oxidase Subunit III; Cytochrome C Oxidase FixP Chain Protein; Diheme Cytochrome C

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MADHAHHGEIDKVTGTATTGHEWDGIQELNTPLPRWWIWTFYATIIWSIGYFIVYPAWPLMNGYTHGLFGYSSRAELDVD
LAKLNQVRGEKMQALATASLEEIEKNPALLALARAKGKVVFGDNCAPCHGSGAAGGKGFPNLNDDDWLWGGSLEQIEKTI
KYGARSGNDEGHMGNMLAFGKDGTLTKDQIVQVANFVRSLSGQSTRPGVDLAAGKQIFAENCVACHGEDAKGNPELGAPN
LTDKIWLYGGDEATIIETITNGRGGVMPAWIGRLDPTTIKAMAVYVHSLGGGK

Sequences:

>Translated_293_residues
MADHAHHGEIDKVTGTATTGHEWDGIQELNTPLPRWWIWTFYATIIWSIGYFIVYPAWPLMNGYTHGLFGYSSRAELDVD
LAKLNQVRGEKMQALATASLEEIEKNPALLALARAKGKVVFGDNCAPCHGSGAAGGKGFPNLNDDDWLWGGSLEQIEKTI
KYGARSGNDEGHMGNMLAFGKDGTLTKDQIVQVANFVRSLSGQSTRPGVDLAAGKQIFAENCVACHGEDAKGNPELGAPN
LTDKIWLYGGDEATIIETITNGRGGVMPAWIGRLDPTTIKAMAVYVHSLGGGK
>Mature_292_residues
ADHAHHGEIDKVTGTATTGHEWDGIQELNTPLPRWWIWTFYATIIWSIGYFIVYPAWPLMNGYTHGLFGYSSRAELDVDL
AKLNQVRGEKMQALATASLEEIEKNPALLALARAKGKVVFGDNCAPCHGSGAAGGKGFPNLNDDDWLWGGSLEQIEKTIK
YGARSGNDEGHMGNMLAFGKDGTLTKDQIVQVANFVRSLSGQSTRPGVDLAAGKQIFAENCVACHGEDAKGNPELGAPNL
TDKIWLYGGDEATIIETITNGRGGVMPAWIGRLDPTTIKAMAVYVHSLGGGK

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 31572; Mature: 31441

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADHAHHGEIDKVTGTATTGHEWDGIQELNTPLPRWWIWTFYATIIWSIGYFIVYPAWPL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCHH
MNGYTHGLFGYSSRAELDVDLAKLNQVRGEKMQALATASLEEIEKNPALLALARAKGKVV
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
FGDNCAPCHGSGAAGGKGFPNLNDDDWLWGGSLEQIEKTIKYGARSGNDEGHMGNMLAFG
ECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEC
KDGTLTKDQIVQVANFVRSLSGQSTRPGVDLAAGKQIFAENCVACHGEDAKGNPELGAPN
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHCHHEECCCCCCCCCCCCCCC
LTDKIWLYGGDEATIIETITNGRGGVMPAWIGRLDPTTIKAMAVYVHSLGGGK
CCCEEEEEECCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADHAHHGEIDKVTGTATTGHEWDGIQELNTPLPRWWIWTFYATIIWSIGYFIVYPAWPL
CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHEEECCCHH
MNGYTHGLFGYSSRAELDVDLAKLNQVRGEKMQALATASLEEIEKNPALLALARAKGKVV
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEE
FGDNCAPCHGSGAAGGKGFPNLNDDDWLWGGSLEQIEKTIKYGARSGNDEGHMGNMLAFG
ECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCEEEEC
KDGTLTKDQIVQVANFVRSLSGQSTRPGVDLAAGKQIFAENCVACHGEDAKGNPELGAPN
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHCHHEECCCCCCCCCCCCCCC
LTDKIWLYGGDEATIIETITNGRGGVMPAWIGRLDPTTIKAMAVYVHSLGGGK
CCCEEEEEECCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA