| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895284
Identifier: 190895284
GI number: 190895284
Start: 1053024
End: 1053449
Strand: Reverse
Name: 190895284
Synonym: RHECIAT_PC0000957
Alternate gene names: NA
Gene position: 1053449-1053024 (Counterclockwise)
Preceding gene: 190895285
Following gene: 190895283
Centisome position: 96.51
GC content: 61.97
Gene sequence:
>426_bases ATGTCCGACATTCTGGAGCGGATTGAGGGAGTAGTCATCGGGCTGTTGCTGGGTTTCGATGCAGGCGTGCCATTGGTCGT GTTTCCCGGCAATCCCGAGGAGACAGCGCTCCGTGCGAAAAGCTTGGCAGAGCTCACGTCTGCCATGGTCGGGGCTGAGG TAGCGTTACTCTTCGAGGGCGGGGACCCGTCTCGGCCGCTGATCGTAGGGCGCATCGTCGATCCGGCGCGCGGGGCGCCG ACGCCGAATGTCGTTCGTGACGGCGAGCGTGTCCAGATCACAGCCGGAGAGCGGATCGAGCTTCGTTGCGGCAAAGCGAC GATCATCATGGAAAAGGATGGGCACATCACCATCCGTGGCACTTATGTGACGAGCCACGCTAGCGCAGCCAATCGCGTCC GTGGTGGGTCGGTGAACCTCAACTGA
Upstream 100 bases:
>100_bases AGGACATTTCGATCAACGCCTCGGGTAAATTCAATGGCAAGGCCTCGGGAGAGGTCACATGGAAGGGCAGCAAGATCAAT CATAATTGAGGATGGGTCAT
Downstream 100 bases:
>100_bases TGCACGCCGCGCCCGTCCTTCGTGAGATCGTCCGTCAACACGCCGAAATGGCGGCGTTCTTATGGACTGTCTACGACTAC CATTTGCTTCACCCGGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSDILERIEGVVIGLLLGFDAGVPLVVFPGNPEETALRAKSLAELTSAMVGAEVALLFEGGDPSRPLIVGRIVDPARGAP TPNVVRDGERVQITAGERIELRCGKATIIMEKDGHITIRGTYVTSHASAANRVRGGSVNLN
Sequences:
>Translated_141_residues MSDILERIEGVVIGLLLGFDAGVPLVVFPGNPEETALRAKSLAELTSAMVGAEVALLFEGGDPSRPLIVGRIVDPARGAP TPNVVRDGERVQITAGERIELRCGKATIIMEKDGHITIRGTYVTSHASAANRVRGGSVNLN >Mature_140_residues SDILERIEGVVIGLLLGFDAGVPLVVFPGNPEETALRAKSLAELTSAMVGAEVALLFEGGDPSRPLIVGRIVDPARGAPT PNVVRDGERVQITAGERIELRCGKATIIMEKDGHITIRGTYVTSHASAANRVRGGSVNLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14825; Mature: 14694
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDILERIEGVVIGLLLGFDAGVPLVVFPGNPEETALRAKSLAELTSAMVGAEVALLFEG CHHHHHHHHHHHEEEEHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC GDPSRPLIVGRIVDPARGAPTPNVVRDGERVQITAGERIELRCGKATIIMEKDGHITIRG CCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEECCEEEEEECCCEEEEEE TYVTSHASAANRVRGGSVNLN EEEECCCCHHHHCCCCEEECC >Mature Secondary Structure SDILERIEGVVIGLLLGFDAGVPLVVFPGNPEETALRAKSLAELTSAMVGAEVALLFEG HHHHHHHHHHHEEEEHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEC GDPSRPLIVGRIVDPARGAPTPNVVRDGERVQITAGERIELRCGKATIIMEKDGHITIRG CCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEECCEEEEEECCCEEEEEE TYVTSHASAANRVRGGSVNLN EEEECCCCHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA