Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190895260

Identifier: 190895260

GI number: 190895260

Start: 1022721

End: 1025150

Strand: Reverse

Name: 190895260

Synonym: RHECIAT_PC0000933

Alternate gene names: NA

Gene position: 1025150-1022721 (Counterclockwise)

Preceding gene: 190895261

Following gene: 190895251

Centisome position: 93.92

GC content: 62.92

Gene sequence:

>2430_bases
ATGCAAGCAGATGTGCTCGCCGCACTGGCGCAGCCGCTGCTGGATCTTGCTAGACGTGCCGAAAGCGAAAAGAATCCAGA
TCCACGCGAGCTTGCGGCCATGGCACGGACCCTCGTCGCCGCCTTCGAGACGGAAGCACGACGCAGGAAAGTTCCCCCCG
ACTGGCTCCTGGATGCCCGCGATGCCCTTGTCGCTTTGGTTGATGCGCGAGCGCGCAACAATCCGGCATTGCCGATCCGA
AAATGGGAGCGCGCGCTTGCCGCTGCTCTTCCAATCGGGGGCGTTATGGCGGCCAGCACCCTTGCCGAACGGGCGAGGGC
GGCAGCGAAAGCAGGGCCTGCACGCCGGGATCTCGCCCGCTTCCTCGGCCACTGTAACGACGCTGTCCAGGCAGCACTTC
TATCTCGCACGCAGCACAAAACCGATCGCGGTCTTGCCGCTCCTGTGATCGGCATCTTCCTGGCAGTTCTGGTGGTTTGG
GCCGGATGGGCCGAATGGCGGTTTCGTGAGCGGCTTTTGTCGCAGCTGCCCGATGTCGCACGTGTCGTAGAAGCAGGACG
CACGGCAAAACCGGCAGCCCGCGCAGCCCAACTCGACGCATTCCTTGCAGGAGTTCGACTTGTTGAGACGGATGCGCAGC
GTTCCCCCCTTGGTCTCATTCATCATTTAAGGATCTTTGATCCGGCAGAGGCCGCACGCCGACGCTATGGCCAAGCCGTC
GACGCCCTGGCCAGCGGCCCGCTTGCCGACGCCCTTGGTGTTGCTCTCGCCACGGAAGGTGAGGCAACTGCACTTTACGA
TTCGCTGCGTGCCTGGTCTATCTTGAAGGGCACATCGGACTGGCAACCGCGGTTCCTGGCGGGCTGGATCGAAGATCGCA
CTCAGACATTTCCCGAACTTGCCGGCATGGCAATGCATGTCGCTGCCATGTCCGGGCCTCCAGCAGATCTTGAAGAGCCG
GATCCTGAAGCAATCGCTCAAGCCAGACAGTTTGCTTCAGAGGGCTTGGCAAACGAGCGCGCCATGCTGGAACTCGCCCG
GGCCGAGAAAACTGCGGGCCTGCCTGGCTGGTCCCTCGGGCAGGCAGCACCGGGCCTCGACAAGATCCTGATTCGCAGGT
CCGGACTGCCCATCGAGCAAGCCGTGCCTGGTCTTTACACTGAGGCAGGATGGGCTTACGCGCGCTCCGGCGCTGCAGAA
GAGGCGATCGGGAAGGCGAAGGCCGAAACTGCCAGCCTCCTGCACGCCGGAGGCGAGACAAGCGCCGATGCAGTTATGGA
CCTGCTTCAGAAGCGAACCCTGGAGACCTGGTCCCGGTACCTCGGCGATCTTCGCGTCAGGCCATTCACCGACCAACCGA
GTGCGGTTATTGTCAGCGGCGTGCTCAGCGCGTCTAACTCGCCGCTCTCGGCGCTGATCCGCGAGGTATGGCGTCAGGCG
GGCGGCACCGACCGCAGCCGCAGCCACGCGAACCAGCTTCGAATTGCCGCAACACTCGGACCTGCCATCCAATTCGTGGA
GCAGGGTCGCATGTCGGAAATCTCCCGACTTTTCGTGTCGCTGAATGTCGCGCTTGCCTTTCTCGACGGAAATTCCGATA
TCGGCAAAAAGTCGCTGATGGACGCACAGGAGCGTGCGAACTCCGTCGTCGCCCTGCAGCAGGCGCCGCTCCTCGTCGTC
CAAATGGTCGAAGACGTGATCTCGCAGACGGCATCTCCAAAGCCGGTAGAAAAGGCCGAAGATCCCGTCCCGACGGCAAA
GCCGTCAGGGGCTTGGGGCGAGATCGCGACGGCCTGCCAGGCTGCTGTCGCAGGCCACTATCCGTTCTTTGACGGGTCGG
ATGCGGATCTGGCTGAAGTCGCGCGCATTTTTGCGCCCAATGGTCTCGTGGAGACCTATTTCCGGACGCAACTGGCGCCT
TTGATGGATATATCAACGACGCCGTGGCGCTGGAAACCGGGAGCACGGCTTTCTGGTTACGCGCCCGAAAGTGCGACATT
CTTTCAGAAAGCTTCCGCGATCGGCGACGCGCTCTTTCGCCAGGGAAACGCGCCGCGTCTTCCTGTATTGCTGGAGGCAC
TTGCGCAACGCGGTGCGGCTACCATCTCAATCGGCGGCGCTCACGCGCCGGTTACCACATCAGGCGGGGCGGTGTCCTTT
AACTGGCCGGGGGATCTGCCATCACGCGGCTTCGAGATCTCCTTCGATAGCGGCAGTGCGGTTGAGAAGAAGAGCACGCC
CGGGCCGTGGGGCCTGCTGCGATTTCTGGACGGGTCGCGCTTGCGGCCACGCGACGGCGGCCGGCGTTTTCTCATAGACG
TGCGGGCAACCGGCGCACGCGCCTACCTGCAGATGTCGTTCGCCGAGCCTGCCAACCCTGTCTCCGTGCGCATCCTGATG
CGGGAACTGACATGTCCATCGAGCCTCTGA

Upstream 100 bases:

>100_bases
AAGATTCCATGCATTTCGAGGTAGGCGAGGCGCTGCTGCGAAAATGGGCGGCCGAGGGCAAGCTGTGAAGGGCGTTTTCG
AACCACCGGGTCCAGTCACG

Downstream 100 bases:

>100_bases
CGTCACCAAGGATTTAGAGGAGGACGCACTCGCCTAATGAATTCACGTATGCCTCCGGGATGCTGCGGGTCACGGATGTT
GCGAGTCCTGATCAGCCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: ImcF Domain-Containing Protein; IcmF Family Protein; Inner Membrane Protein; ImcF-Like Protein; Replication Related Protein; ImcF Domain Protein; Lipoprotein

Number of amino acids: Translated: 809; Mature: 809

Protein sequence:

>809_residues
MQADVLAALAQPLLDLARRAESEKNPDPRELAAMARTLVAAFETEARRRKVPPDWLLDARDALVALVDARARNNPALPIR
KWERALAAALPIGGVMAASTLAERARAAAKAGPARRDLARFLGHCNDAVQAALLSRTQHKTDRGLAAPVIGIFLAVLVVW
AGWAEWRFRERLLSQLPDVARVVEAGRTAKPAARAAQLDAFLAGVRLVETDAQRSPLGLIHHLRIFDPAEAARRRYGQAV
DALASGPLADALGVALATEGEATALYDSLRAWSILKGTSDWQPRFLAGWIEDRTQTFPELAGMAMHVAAMSGPPADLEEP
DPEAIAQARQFASEGLANERAMLELARAEKTAGLPGWSLGQAAPGLDKILIRRSGLPIEQAVPGLYTEAGWAYARSGAAE
EAIGKAKAETASLLHAGGETSADAVMDLLQKRTLETWSRYLGDLRVRPFTDQPSAVIVSGVLSASNSPLSALIREVWRQA
GGTDRSRSHANQLRIAATLGPAIQFVEQGRMSEISRLFVSLNVALAFLDGNSDIGKKSLMDAQERANSVVALQQAPLLVV
QMVEDVISQTASPKPVEKAEDPVPTAKPSGAWGEIATACQAAVAGHYPFFDGSDADLAEVARIFAPNGLVETYFRTQLAP
LMDISTTPWRWKPGARLSGYAPESATFFQKASAIGDALFRQGNAPRLPVLLEALAQRGAATISIGGAHAPVTTSGGAVSF
NWPGDLPSRGFEISFDSGSAVEKKSTPGPWGLLRFLDGSRLRPRDGGRRFLIDVRATGARAYLQMSFAEPANPVSVRILM
RELTCPSSL

Sequences:

>Translated_809_residues
MQADVLAALAQPLLDLARRAESEKNPDPRELAAMARTLVAAFETEARRRKVPPDWLLDARDALVALVDARARNNPALPIR
KWERALAAALPIGGVMAASTLAERARAAAKAGPARRDLARFLGHCNDAVQAALLSRTQHKTDRGLAAPVIGIFLAVLVVW
AGWAEWRFRERLLSQLPDVARVVEAGRTAKPAARAAQLDAFLAGVRLVETDAQRSPLGLIHHLRIFDPAEAARRRYGQAV
DALASGPLADALGVALATEGEATALYDSLRAWSILKGTSDWQPRFLAGWIEDRTQTFPELAGMAMHVAAMSGPPADLEEP
DPEAIAQARQFASEGLANERAMLELARAEKTAGLPGWSLGQAAPGLDKILIRRSGLPIEQAVPGLYTEAGWAYARSGAAE
EAIGKAKAETASLLHAGGETSADAVMDLLQKRTLETWSRYLGDLRVRPFTDQPSAVIVSGVLSASNSPLSALIREVWRQA
GGTDRSRSHANQLRIAATLGPAIQFVEQGRMSEISRLFVSLNVALAFLDGNSDIGKKSLMDAQERANSVVALQQAPLLVV
QMVEDVISQTASPKPVEKAEDPVPTAKPSGAWGEIATACQAAVAGHYPFFDGSDADLAEVARIFAPNGLVETYFRTQLAP
LMDISTTPWRWKPGARLSGYAPESATFFQKASAIGDALFRQGNAPRLPVLLEALAQRGAATISIGGAHAPVTTSGGAVSF
NWPGDLPSRGFEISFDSGSAVEKKSTPGPWGLLRFLDGSRLRPRDGGRRFLIDVRATGARAYLQMSFAEPANPVSVRILM
RELTCPSSL
>Mature_809_residues
MQADVLAALAQPLLDLARRAESEKNPDPRELAAMARTLVAAFETEARRRKVPPDWLLDARDALVALVDARARNNPALPIR
KWERALAAALPIGGVMAASTLAERARAAAKAGPARRDLARFLGHCNDAVQAALLSRTQHKTDRGLAAPVIGIFLAVLVVW
AGWAEWRFRERLLSQLPDVARVVEAGRTAKPAARAAQLDAFLAGVRLVETDAQRSPLGLIHHLRIFDPAEAARRRYGQAV
DALASGPLADALGVALATEGEATALYDSLRAWSILKGTSDWQPRFLAGWIEDRTQTFPELAGMAMHVAAMSGPPADLEEP
DPEAIAQARQFASEGLANERAMLELARAEKTAGLPGWSLGQAAPGLDKILIRRSGLPIEQAVPGLYTEAGWAYARSGAAE
EAIGKAKAETASLLHAGGETSADAVMDLLQKRTLETWSRYLGDLRVRPFTDQPSAVIVSGVLSASNSPLSALIREVWRQA
GGTDRSRSHANQLRIAATLGPAIQFVEQGRMSEISRLFVSLNVALAFLDGNSDIGKKSLMDAQERANSVVALQQAPLLVV
QMVEDVISQTASPKPVEKAEDPVPTAKPSGAWGEIATACQAAVAGHYPFFDGSDADLAEVARIFAPNGLVETYFRTQLAP
LMDISTTPWRWKPGARLSGYAPESATFFQKASAIGDALFRQGNAPRLPVLLEALAQRGAATISIGGAHAPVTTSGGAVSF
NWPGDLPSRGFEISFDSGSAVEKKSTPGPWGLLRFLDGSRLRPRDGGRRFLIDVRATGARAYLQMSFAEPANPVSVRILM
RELTCPSSL

Specific function: Unknown

COG id: COG3523

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86572; Mature: 86572

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADVLAALAQPLLDLARRAESEKNPDPRELAAMARTLVAAFETEARRRKVPPDWLLDAR
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DALVALVDARARNNPALPIRKWERALAAALPIGGVMAASTLAERARAAAKAGPARRDLAR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
FLGHCNDAVQAALLSRTQHKTDRGLAAPVIGIFLAVLVVWAGWAEWRFRERLLSQLPDVA
HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHH
RVVEAGRTAKPAARAAQLDAFLAGVRLVETDAQRSPLGLIHHLRIFDPAEAARRRYGQAV
HHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
DALASGPLADALGVALATEGEATALYDSLRAWSILKGTSDWQPRFLAGWIEDRTQTFPEL
HHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AGMAMHVAAMSGPPADLEEPDPEAIAQARQFASEGLANERAMLELARAEKTAGLPGWSLG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
QAAPGLDKILIRRSGLPIEQAVPGLYTEAGWAYARSGAAEEAIGKAKAETASLLHAGGET
CCCCCHHHHHHHHCCCCHHHHCCCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
SADAVMDLLQKRTLETWSRYLGDLRVRPFTDQPSAVIVSGVLSASNSPLSALIREVWRQA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC
GGTDRSRSHANQLRIAATLGPAIQFVEQGRMSEISRLFVSLNVALAFLDGNSDIGKKSLM
CCCCCHHHHHHHEEEHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHH
DAQERANSVVALQQAPLLVVQMVEDVISQTASPKPVEKAEDPVPTAKPSGAWGEIATACQ
HHHHHHCCEEEHHHCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHH
AAVAGHYPFFDGSDADLAEVARIFAPNGLVETYFRTQLAPLMDISTTPWRWKPGARLSGY
HHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
APESATFFQKASAIGDALFRQGNAPRLPVLLEALAQRGAATISIGGAHAPVTTSGGAVSF
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEECCCCEEEE
NWPGDLPSRGFEISFDSGSAVEKKSTPGPWGLLRFLDGSRLRPRDGGRRFLIDVRATGAR
CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCE
AYLQMSFAEPANPVSVRILMRELTCPSSL
EEEEEECCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQADVLAALAQPLLDLARRAESEKNPDPRELAAMARTLVAAFETEARRRKVPPDWLLDAR
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DALVALVDARARNNPALPIRKWERALAAALPIGGVMAASTLAERARAAAKAGPARRDLAR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
FLGHCNDAVQAALLSRTQHKTDRGLAAPVIGIFLAVLVVWAGWAEWRFRERLLSQLPDVA
HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHH
RVVEAGRTAKPAARAAQLDAFLAGVRLVETDAQRSPLGLIHHLRIFDPAEAARRRYGQAV
HHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
DALASGPLADALGVALATEGEATALYDSLRAWSILKGTSDWQPRFLAGWIEDRTQTFPEL
HHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AGMAMHVAAMSGPPADLEEPDPEAIAQARQFASEGLANERAMLELARAEKTAGLPGWSLG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
QAAPGLDKILIRRSGLPIEQAVPGLYTEAGWAYARSGAAEEAIGKAKAETASLLHAGGET
CCCCCHHHHHHHHCCCCHHHHCCCCHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
SADAVMDLLQKRTLETWSRYLGDLRVRPFTDQPSAVIVSGVLSASNSPLSALIREVWRQA
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC
GGTDRSRSHANQLRIAATLGPAIQFVEQGRMSEISRLFVSLNVALAFLDGNSDIGKKSLM
CCCCCHHHHHHHEEEHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEEECCCCCCHHHHH
DAQERANSVVALQQAPLLVVQMVEDVISQTASPKPVEKAEDPVPTAKPSGAWGEIATACQ
HHHHHHCCEEEHHHCHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHH
AAVAGHYPFFDGSDADLAEVARIFAPNGLVETYFRTQLAPLMDISTTPWRWKPGARLSGY
HHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
APESATFFQKASAIGDALFRQGNAPRLPVLLEALAQRGAATISIGGAHAPVTTSGGAVSF
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCEECCCCEEEE
NWPGDLPSRGFEISFDSGSAVEKKSTPGPWGLLRFLDGSRLRPRDGGRRFLIDVRATGAR
CCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCE
AYLQMSFAEPANPVSVRILMRELTCPSSL
EEEEEECCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA