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The map label for this gene is yidL [C]

Identifier: 190895251

GI number: 190895251

Start: 1012560

End: 1013459

Strand: Reverse

Name: yidL [C]

Synonym: RHECIAT_PC0000924

Alternate gene names: 190895251

Gene position: 1013459-1012560 (Counterclockwise)

Preceding gene: 190895260

Following gene: 190895249

Centisome position: 92.85

GC content: 64.44

Gene sequence:

>900_bases
GTGGCGACGGACGGGGGGATTCACCACTATGCGAGAGGCGAATGGTACGCGCCGTCGCTCTCGCACCGGCGCATTCGTTT
TCAAAAGGGGCTCTATGCCGACTTCCATCATTTCCTCCTGCTTGGCGAAGGGAGGGGCGAGCTTCATTTCGACAATGGCG
AGGACCGGCCGCTGCACGGGCCGCTGATTGCCTTTCTGCCGCCGCAGGCACGCTGCGATCTGTCGATCGCCGCGGGAACC
GCCGCCCATCTGGTCGGGGTGTCGGCGCAGATCATGGTCGATGCGATCGGCGACAAGGTGGAATCCTATTCGCTGCGTAT
CTTCACCGAGCAGCGCAAGCTGGTCGAAGCGGCGGATCCGTTGCTGGTGGCGGAGGTCGCTCCGTTGGTTACGGGCTTCG
TGCGCGAACTCGGCGATCCCGCCCGCTCCTCCTGGATGGTCGCAGCCGCCTATATCAGGCTGGTCCTGATGGCGCTTTGG
CGCGGCCGTGGCGGGGAAAGAGGCGAGGAGCGAGGGCAGGGCGAAACAGGTTCGATCCTGCAGCGATATCGCCAGCTCGT
CGAGGCCGGTTTCCGCAACCACCGACCAATCAGCGATTATGCCGCCGAACTCGGCGTCACCACCGACCGGCTTCATTCCA
TCTGCCAGAGGGCGCTCGGCCGCTCGCCGATCCAGCTCCTGCACGAACGCGTGGTGCAGGAGGCGAAGCTGAGATTGGAG
CGCTCGGCCCGCAATATCCAGGAAATCTCCGACAGTCTCGGTTTCCGCGACCCGACCTATTTCAGCCATTTCTTCAAGCG
CAAGACCGGCCTTTCGCCCGCCGGCTACCGCGAGATCGCCCGCGCGTCCGCCGGTTCGGAAAACAGCATGCTCTCGTCGG
GCTATGCGGACTGGCCCTAG

Upstream 100 bases:

>100_bases
AGGTTACGCCGATCGTTTCAGGATGGAATGCGATTTACTGGGTTAATATTGTAATTATCCGGCGCTTGGCCCATGTTTGC
AGGGAGCAGGAGGAGATGCG

Downstream 100 bases:

>100_bases
AGCTCAGGCGGGCGCCGGAAGCAGCCCATCAGTTCCCCCTGTAAATCCGCTTCAGCGCGGTGAGCAACGCATCCATTTCA
TCGGCCGAAAACAGGTCGAT

Product: putative AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Regulator PobR; 4-Hydroxyphenylacetate Catabolism Regulatory Protein HpaA; Helix-Turn-Helix Domain-Containing Protein; Regulator Of 4HPA-Hydroxylase Operon; Transcriptional Regulatory Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; PobR Regulator; Transcriptional Regulator Pobr Arac Family Protein; AraC Family Regulatory Protein; Transcriptional Regulatory Protein AraC-Type; AraC-Family Transcriptional Regulator; AraC/XylS Family Transcription Factor; AraC-Type Regulatory Protein; Helix-Turn-Helix AraC Type; Regulator Of 4hpa-Hydroxylase Operon; Transcriptional Regulator Protein; AraC Family Transcription Regulator Protein

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MATDGGIHHYARGEWYAPSLSHRRIRFQKGLYADFHHFLLLGEGRGELHFDNGEDRPLHGPLIAFLPPQARCDLSIAAGT
AAHLVGVSAQIMVDAIGDKVESYSLRIFTEQRKLVEAADPLLVAEVAPLVTGFVRELGDPARSSWMVAAAYIRLVLMALW
RGRGGERGEERGQGETGSILQRYRQLVEAGFRNHRPISDYAAELGVTTDRLHSICQRALGRSPIQLLHERVVQEAKLRLE
RSARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREIARASAGSENSMLSSGYADWP

Sequences:

>Translated_299_residues
MATDGGIHHYARGEWYAPSLSHRRIRFQKGLYADFHHFLLLGEGRGELHFDNGEDRPLHGPLIAFLPPQARCDLSIAAGT
AAHLVGVSAQIMVDAIGDKVESYSLRIFTEQRKLVEAADPLLVAEVAPLVTGFVRELGDPARSSWMVAAAYIRLVLMALW
RGRGGERGEERGQGETGSILQRYRQLVEAGFRNHRPISDYAAELGVTTDRLHSICQRALGRSPIQLLHERVVQEAKLRLE
RSARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREIARASAGSENSMLSSGYADWP
>Mature_298_residues
ATDGGIHHYARGEWYAPSLSHRRIRFQKGLYADFHHFLLLGEGRGELHFDNGEDRPLHGPLIAFLPPQARCDLSIAAGTA
AHLVGVSAQIMVDAIGDKVESYSLRIFTEQRKLVEAADPLLVAEVAPLVTGFVRELGDPARSSWMVAAAYIRLVLMALWR
GRGGERGEERGQGETGSILQRYRQLVEAGFRNHRPISDYAAELGVTTDRLHSICQRALGRSPIQLLHERVVQEAKLRLER
SARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREIARASAGSENSMLSSGYADWP

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33291; Mature: 33160

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDGGIHHYARGEWYAPSLSHRRIRFQKGLYADFHHFLLLGEGRGELHFDNGEDRPLHG
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHEEEEECCCCCEECCCCCCCCCCC
PLIAFLPPQARCDLSIAAGTAAHLVGVSAQIMVDAIGDKVESYSLRIFTEQRKLVEAADP
CEEEECCCCCCCCEEECCCHHHHHHHCHHHHHHHHHHCHHHHHEEEEEHHHHHHHHHHCC
LLVAEVAPLVTGFVRELGDPARSSWMVAAAYIRLVLMALWRGRGGERGEERGQGETGSIL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHH
QRYRQLVEAGFRNHRPISDYAAELGVTTDRLHSICQRALGRSPIQLLHERVVQEAKLRLE
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RSARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREIARASAGSENSMLSSGYADWP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
ATDGGIHHYARGEWYAPSLSHRRIRFQKGLYADFHHFLLLGEGRGELHFDNGEDRPLHG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHEEEEECCCCCEECCCCCCCCCCC
PLIAFLPPQARCDLSIAAGTAAHLVGVSAQIMVDAIGDKVESYSLRIFTEQRKLVEAADP
CEEEECCCCCCCCEEECCCHHHHHHHCHHHHHHHHHHCHHHHHEEEEEHHHHHHHHHHCC
LLVAEVAPLVTGFVRELGDPARSSWMVAAAYIRLVLMALWRGRGGERGEERGQGETGSIL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHH
QRYRQLVEAGFRNHRPISDYAAELGVTTDRLHSICQRALGRSPIQLLHERVVQEAKLRLE
HHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RSARNIQEISDSLGFRDPTYFSHFFKRKTGLSPAGYREIARASAGSENSMLSSGYADWP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA