| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895223
Identifier: 190895223
GI number: 190895223
Start: 986756
End: 987793
Strand: Reverse
Name: 190895223
Synonym: RHECIAT_PC0000896
Alternate gene names: NA
Gene position: 987793-986756 (Counterclockwise)
Preceding gene: 190895227
Following gene: 190895221
Centisome position: 90.5
GC content: 64.55
Gene sequence:
>1038_bases ATGTTATACGCTTCGGAATTGGCAAGCCGTCTTGCGCAAGACGCAGAAGCGGTCTGCCGTCATTATCTCTCAGCTGGCCG TCGTGCGGGCAATTATTGGATCGTCGGCGATGTCGAAAACAACAAGGGCCGATCGCTTTATGTCCAATTGACCGGCCCGC GCGCCGGCCGGTGGACGGACGCGGCGACCGGACAGTACGGCGACCTTCTCGATCTCGTGCGGGAGACCTGCCAGCTCGTG GATTTCCGCGACATAGCCGAGGAGGCAAGGCATTTCCTCGGGCTTTCGCAACCTGAACCAGCGCCCCAAAGGGGCGATAC CGCTGGCCAGGCATCCGTCGATCGACCGGCGGCCGAACGCGCGAGGCGTCTATTTCGCATGACGCAGCCGCTGGCGGGCA CGCTTGCTGACGTCTACCTGCGCAAGCGCGGGATTGTGCGGGCATCCGACCATACGGCGCTTCGCTTCCATCCTGCCTGC TACTATCGTGACCTGGTGAACGGCCGGGCGACAAGCTATCCAGCGCTGGTTGCCGCCGTGACCGATCCAGGCGGCGCGAT CACCGGCGTGCATCGCACCTGGCTGGACCCTGATGGCGACGGCAAGGCCAAGGTCGAGGATCCCCGTCGTGCGCTCGGCG GACTTCTTGGCAATGCCGTGCGCTTTCGATTTCCAAACTCGGCTCCAGTACCTGTCATGGCGGCGGGCGAAGGCCTCGAA ACCATGCTGTCGCTTCTCGCAGTCATGCCAGGCATGCCGATGGCAGCAGCGCTGACAGCCAATCATCTTGCCGCCTTCCG GCTCCCGGTCGGATGTCGGCGCCTCTATGTCGCAGGCGACGATGACGTAGCCGGTTGGCACGCGGTAGGGGGATTGAGTC GACGGGCGCAGACACTCGGCGTCCTGTCGCTCGTGCTTGCCCCCGAGCTCGGCGACTTCAACGAGGATCTGCGCTGGCTG GGCCCTGACCGGCTGGCAGCGCGGCTGCGGGAACAGCTGGCGCCTGAGGACGTGATTGCGTTTATGCCGGCGCGATGA
Upstream 100 bases:
>100_bases CCCGACTGCGATGGGCAAGAAAGGCGCGGCGATCCTTGCGCGCCTGATTCAGCGCCATCGGCTGATCGATATCACCAACC GTTCGTGACGGAGGCGATCC
Downstream 100 bases:
>100_bases TTCGCAGGGAAGACGGTGGACCGGTCGCCGAATCGGGAGGCTGGTCCGCGATGTTTTCCGATTCGATAAGCGCGCCCGCG AGCCTGCCAAAAAATGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MLYASELASRLAQDAEAVCRHYLSAGRRAGNYWIVGDVENNKGRSLYVQLTGPRAGRWTDAATGQYGDLLDLVRETCQLV DFRDIAEEARHFLGLSQPEPAPQRGDTAGQASVDRPAAERARRLFRMTQPLAGTLADVYLRKRGIVRASDHTALRFHPAC YYRDLVNGRATSYPALVAAVTDPGGAITGVHRTWLDPDGDGKAKVEDPRRALGGLLGNAVRFRFPNSAPVPVMAAGEGLE TMLSLLAVMPGMPMAAALTANHLAAFRLPVGCRRLYVAGDDDVAGWHAVGGLSRRAQTLGVLSLVLAPELGDFNEDLRWL GPDRLAARLREQLAPEDVIAFMPAR
Sequences:
>Translated_345_residues MLYASELASRLAQDAEAVCRHYLSAGRRAGNYWIVGDVENNKGRSLYVQLTGPRAGRWTDAATGQYGDLLDLVRETCQLV DFRDIAEEARHFLGLSQPEPAPQRGDTAGQASVDRPAAERARRLFRMTQPLAGTLADVYLRKRGIVRASDHTALRFHPAC YYRDLVNGRATSYPALVAAVTDPGGAITGVHRTWLDPDGDGKAKVEDPRRALGGLLGNAVRFRFPNSAPVPVMAAGEGLE TMLSLLAVMPGMPMAAALTANHLAAFRLPVGCRRLYVAGDDDVAGWHAVGGLSRRAQTLGVLSLVLAPELGDFNEDLRWL GPDRLAARLREQLAPEDVIAFMPAR >Mature_345_residues MLYASELASRLAQDAEAVCRHYLSAGRRAGNYWIVGDVENNKGRSLYVQLTGPRAGRWTDAATGQYGDLLDLVRETCQLV DFRDIAEEARHFLGLSQPEPAPQRGDTAGQASVDRPAAERARRLFRMTQPLAGTLADVYLRKRGIVRASDHTALRFHPAC YYRDLVNGRATSYPALVAAVTDPGGAITGVHRTWLDPDGDGKAKVEDPRRALGGLLGNAVRFRFPNSAPVPVMAAGEGLE TMLSLLAVMPGMPMAAALTANHLAAFRLPVGCRRLYVAGDDDVAGWHAVGGLSRRAQTLGVLSLVLAPELGDFNEDLRWL GPDRLAARLREQLAPEDVIAFMPAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37418; Mature: 37418
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYASELASRLAQDAEAVCRHYLSAGRRAGNYWIVGDVENNKGRSLYVQLTGPRAGRWTD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCC AATGQYGDLLDLVRETCQLVDFRDIAEEARHFLGLSQPEPAPQRGDTAGQASVDRPAAER CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH ARRLFRMTQPLAGTLADVYLRKRGIVRASDHTALRFHPACYYRDLVNGRATSYPALVAAV HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHHHCCCCCCCCEEEEEE TDPGGAITGVHRTWLDPDGDGKAKVEDPRRALGGLLGNAVRFRFPNSAPVPVMAAGEGLE ECCCCCEECCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEECCCCHH TMLSLLAVMPGMPMAAALTANHLAAFRLPVGCRRLYVAGDDDVAGWHAVGGLSRRAQTLG HHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH VLSLVLAPELGDFNEDLRWLGPDRLAARLREQLAPEDVIAFMPAR HHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHEECCCC >Mature Secondary Structure MLYASELASRLAQDAEAVCRHYLSAGRRAGNYWIVGDVENNKGRSLYVQLTGPRAGRWTD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCC AATGQYGDLLDLVRETCQLVDFRDIAEEARHFLGLSQPEPAPQRGDTAGQASVDRPAAER CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH ARRLFRMTQPLAGTLADVYLRKRGIVRASDHTALRFHPACYYRDLVNGRATSYPALVAAV HHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHHHCCCCCCCCEEEEEE TDPGGAITGVHRTWLDPDGDGKAKVEDPRRALGGLLGNAVRFRFPNSAPVPVMAAGEGLE ECCCCCEECCHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEECCCCHH TMLSLLAVMPGMPMAAALTANHLAAFRLPVGCRRLYVAGDDDVAGWHAVGGLSRRAQTLG HHHHHHHHCCCCCHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH VLSLVLAPELGDFNEDLRWLGPDRLAARLREQLAPEDVIAFMPAR HHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA