| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895182
Identifier: 190895182
GI number: 190895182
Start: 938497
End: 939639
Strand: Reverse
Name: 190895182
Synonym: RHECIAT_PC0000855
Alternate gene names: NA
Gene position: 939639-938497 (Counterclockwise)
Preceding gene: 190895183
Following gene: 190895181
Centisome position: 86.09
GC content: 50.66
Gene sequence:
>1143_bases ATGATGAGCGACTCGACAAGTCGGTTCATCCAGATGTGGCGGGGCATTGCAGTCGCCTTGGTGGTTCTTTACCACTTTCT AAGCAGGGTACCGCATGAAGCTCTTGGATCAGCCGAAGCTCCGATCCTTCAATTGCAAATAGGCGAAGTTGGCGTCCTGA TCTTCTTTGTCATATCCGGATATTTGATCACCAAGTCAGTCGCGAAAACAACTGACGTCGCGGCATTCTATGCAAAGCGC CTATCTCGTATCTGGCCGCTCTTTATAGTCTCCGTAATCACAGTCTTCGTCTTCATCCATTTCGTGCAGCCGCCAGCCGT TCTGGGACCGCATAGTTTTTTCGAGAAACAGCCAACGGTTTTTGACCTGCTTGGCAATTTATTCTTCCTGGAAGATCTCG GCTTTACATGGGTTGACGGCGCCTACTGGTCGCTCGTGGTTGAACTCAAGTTCTACCTGTTCATCGGATTATTCGCGGTT GCGTTTAAAGAACGGATAGTCCAAACGTTTTGCTCGGTCGCGCTCTTCATGTCTTCAATAGATTTGCTGATTCTGCTCAT CGATCGAACTCCCGGAATACCGTTGGGCTTCGAGAGCTCGAACCATCTACGATTTGTAAGTAGGGTGATGCACGGGCTAT TTATCTCTCAATATCTTCCCTTTTTTGCTTTAGGAGTAGCGATGGCGGGACGGACGCACGACGGCGTGCTCAATGCGCTG CTTGCTCTGGCCGTCGCATTCGGAGTGATGGCAATCAGGAATGATGCATTTATGTTCGACCAAAACGTGCAGTTCTTGTT CGTCCTGGCCGTGGCCCTCCTCGCGGATAAGCTTCTCTTCCAAAGCGCTGTCGTCGTTTGGATTGGAAACTACAGTTATT CGATCTACCTGTTCCATCAAGTGATAGGTCTTGCGCTCATCAAGCTTTTCACCCCGATCATGGGCATCGACCTTGCCATA GCCGCTAGCCTCGGAATTGTTATAGCAATCGCATGGCTTGCGTCGGTTCTCTTCGAATTGCGATACCGCCACATCGTTGC TGCACAGCTTTATCGCATCTTCTCAGTGGTCCGGCTGAACAGGTTGACCTTCCATTTCCGCAATGAAATTCCGCCCATCC GGGAGGCGCTTTCGTCCCCCTGA
Upstream 100 bases:
>100_bases GCGTTAGTTAAGGTTAAAATGTCACAGCCACATTATCAATTTGACGTTGGACCCAGGCATAGCTACTTGGCCGCGAAGAA AACGCAGCGGTGGGAGAGAA
Downstream 100 bases:
>100_bases CCGCACGCTGCGATGTGACGTCGGCTAACCAGCCGGTCTCAAAGTCCCCTGGAAAACGTTCGTTGCAGGCGCGATCAATC AGCGAGATGCCGCAGGGTAA
Product: putative acyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MMSDSTSRFIQMWRGIAVALVVLYHFLSRVPHEALGSAEAPILQLQIGEVGVLIFFVISGYLITKSVAKTTDVAAFYAKR LSRIWPLFIVSVITVFVFIHFVQPPAVLGPHSFFEKQPTVFDLLGNLFFLEDLGFTWVDGAYWSLVVELKFYLFIGLFAV AFKERIVQTFCSVALFMSSIDLLILLIDRTPGIPLGFESSNHLRFVSRVMHGLFISQYLPFFALGVAMAGRTHDGVLNAL LALAVAFGVMAIRNDAFMFDQNVQFLFVLAVALLADKLLFQSAVVVWIGNYSYSIYLFHQVIGLALIKLFTPIMGIDLAI AASLGIVIAIAWLASVLFELRYRHIVAAQLYRIFSVVRLNRLTFHFRNEIPPIREALSSP
Sequences:
>Translated_380_residues MMSDSTSRFIQMWRGIAVALVVLYHFLSRVPHEALGSAEAPILQLQIGEVGVLIFFVISGYLITKSVAKTTDVAAFYAKR LSRIWPLFIVSVITVFVFIHFVQPPAVLGPHSFFEKQPTVFDLLGNLFFLEDLGFTWVDGAYWSLVVELKFYLFIGLFAV AFKERIVQTFCSVALFMSSIDLLILLIDRTPGIPLGFESSNHLRFVSRVMHGLFISQYLPFFALGVAMAGRTHDGVLNAL LALAVAFGVMAIRNDAFMFDQNVQFLFVLAVALLADKLLFQSAVVVWIGNYSYSIYLFHQVIGLALIKLFTPIMGIDLAI AASLGIVIAIAWLASVLFELRYRHIVAAQLYRIFSVVRLNRLTFHFRNEIPPIREALSSP >Mature_380_residues MMSDSTSRFIQMWRGIAVALVVLYHFLSRVPHEALGSAEAPILQLQIGEVGVLIFFVISGYLITKSVAKTTDVAAFYAKR LSRIWPLFIVSVITVFVFIHFVQPPAVLGPHSFFEKQPTVFDLLGNLFFLEDLGFTWVDGAYWSLVVELKFYLFIGLFAV AFKERIVQTFCSVALFMSSIDLLILLIDRTPGIPLGFESSNHLRFVSRVMHGLFISQYLPFFALGVAMAGRTHDGVLNAL LALAVAFGVMAIRNDAFMFDQNVQFLFVLAVALLADKLLFQSAVVVWIGNYSYSIYLFHQVIGLALIKLFTPIMGIDLAI AASLGIVIAIAWLASVLFELRYRHIVAAQLYRIFSVVRLNRLTFHFRNEIPPIREALSSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42629; Mature: 42629
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSDSTSRFIQMWRGIAVALVVLYHFLSRVPHEALGSAEAPILQLQIGEVGVLIFFVISG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECHHHHHHHHHHHH YLITKSVAKTTDVAAFYAKRLSRIWPLFIVSVITVFVFIHFVQPPAVLGPHSFFEKQPTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHH FDLLGNLFFLEDLGFTWVDGAYWSLVVELKFYLFIGLFAVAFKERIVQTFCSVALFMSSI HHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLILLIDRTPGIPLGFESSNHLRFVSRVMHGLFISQYLPFFALGVAMAGRTHDGVLNAL HHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LALAVAFGVMAIRNDAFMFDQNVQFLFVLAVALLADKLLFQSAVVVWIGNYSYSIYLFHQ HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHH VIGLALIKLFTPIMGIDLAIAASLGIVIAIAWLASVLFELRYRHIVAAQLYRIFSVVRLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTFHFRNEIPPIREALSSP HHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MMSDSTSRFIQMWRGIAVALVVLYHFLSRVPHEALGSAEAPILQLQIGEVGVLIFFVISG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECHHHHHHHHHHHH YLITKSVAKTTDVAAFYAKRLSRIWPLFIVSVITVFVFIHFVQPPAVLGPHSFFEKQPTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHH FDLLGNLFFLEDLGFTWVDGAYWSLVVELKFYLFIGLFAVAFKERIVQTFCSVALFMSSI HHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLILLIDRTPGIPLGFESSNHLRFVSRVMHGLFISQYLPFFALGVAMAGRTHDGVLNAL HHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LALAVAFGVMAIRNDAFMFDQNVQFLFVLAVALLADKLLFQSAVVVWIGNYSYSIYLFHQ HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHH VIGLALIKLFTPIMGIDLAIAASLGIVIAIAWLASVLFELRYRHIVAAQLYRIFSVVRLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLTFHFRNEIPPIREALSSP HHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA