Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

Click here to switch to the map view.

The map label for this gene is 190895161

Identifier: 190895161

GI number: 190895161

Start: 909337

End: 909972

Strand: Reverse

Name: 190895161

Synonym: RHECIAT_PC0000833

Alternate gene names: NA

Gene position: 909972-909337 (Counterclockwise)

Preceding gene: 190895162

Following gene: 190895160

Centisome position: 83.37

GC content: 51.1

Gene sequence:

>636_bases
ATGGCGCTGAAACCTAAGAAATCTGTCGTCTACAGTGTCGTTACCACTCGAAGCGATCGCGGAAGTGGCTGGGAACTGGT
CAATCGGGATCGACTACAAGCCGGCGGCGGGATTCGACCGACGGTCCCATGGCCCGACGGTCCTCTGGTTCTGCCACGAG
GTCCGTGGAACATGCCAAAATATCTGGAGCCTCCTCATTTTGTGTTCAAGCATAGGCTCGGACACGGTCCGCACGATTTC
GATATCAGAGATGGCTTTTTCTTGATCTCACCTCAAATGAAAGAGCTGTTCGACGAGCTTGCGCCTGGCGACTGCGAGTA
TACACGCTGCATTACCAGTTATGGCAACGGTGATGCCGGTCCAGAACTCTGGCTTTGCAGTGTTGTAAAGGCTTTTCGTG
ACGCGGTCGATCTCGAAATTTCATCAAACGTAACTGTCTCCGGCTATGGGCTCTATTTGTTCCCGAACTTTAGGAAAATA
GACCTAGCGTTCAAGTCTGCTGTGATCGGTTCGGCTCACCTTTTTCGGCTCGCAGAAAAAGCAAGCAGCCTTTTCTGCGA
CGATGAATTCAAAATTCGATGTAGGGCCAAGGAGATAACGGGGATTTCCTTCGAGAAAATCGGCGCTCTCAATTAA

Upstream 100 bases:

>100_bases
CTCAGAGAATTCCTGTCAGGATAGAGCGCTCACTCTTTTACCCATCTCAGGTTTATAGTCTCCATTTCCAATAGGAAAAC
AAAGCTTTAGGATAATTTCC

Downstream 100 bases:

>100_bases
TTATTGGAAGATCAAATGGTCACAACGTTCGTTGGTCCAACCGCAAGTCATCATGTCTTCACGCAAAATGCTTTCAATCT
CTTCGGCGATCTGTTCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPKYLEPPHFVFKHRLGHGPHDF
DIRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAGPELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKI
DLAFKSAVIGSAHLFRLAEKASSLFCDDEFKIRCRAKEITGISFEKIGALN

Sequences:

>Translated_211_residues
MALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPKYLEPPHFVFKHRLGHGPHDF
DIRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAGPELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKI
DLAFKSAVIGSAHLFRLAEKASSLFCDDEFKIRCRAKEITGISFEKIGALN
>Mature_210_residues
ALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPKYLEPPHFVFKHRLGHGPHDFD
IRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAGPELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKID
LAFKSAVIGSAHLFRLAEKASSLFCDDEFKIRCRAKEITGISFEKIGALN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23597; Mature: 23466

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPK
CCCCCCHHEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCC
YLEPPHFVFKHRLGHGPHDFDIRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAG
CCCCCHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
PELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKIDLAFKSAVIGSAHLFRLAEK
HHHHHHHHHHHHHHHHCEEECCCEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHH
ASSLFCDDEFKIRCRAKEITGISFEKIGALN
HHHCCCCCCEEEEEEEEECCCCCHHHCCCCC
>Mature Secondary Structure 
ALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPK
CCCCCHHEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCC
YLEPPHFVFKHRLGHGPHDFDIRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAG
CCCCCHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
PELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKIDLAFKSAVIGSAHLFRLAEK
HHHHHHHHHHHHHHHHCEEECCCEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHH
ASSLFCDDEFKIRCRAKEITGISFEKIGALN
HHHCCCCCCEEEEEEEEECCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA