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The map label for this gene is yjhH [C]

Identifier: 190895152

GI number: 190895152

Start: 886025

End: 886930

Strand: Reverse

Name: yjhH [C]

Synonym: RHECIAT_PC0000822

Alternate gene names: 190895152

Gene position: 886930-886025 (Counterclockwise)

Preceding gene: 190895153

Following gene: 190895146

Centisome position: 81.26

GC content: 58.06

Gene sequence:

>906_bases
ATGAATCCGCAGCAGCTAAAGGCCGCACTCGGCTCGGGCCTCCTTTCGTTCCCGGTTACCCACTTCGATCGCAACGGCAA
GTTCGCGCCGGAGAGCTACAAGGCTCATGTCGAATGGCTTGCCAGCTACAATGCACCGGTCCTGTTTGCCGCAGGCGGCA
CAGGCGAATTCTTCTCATTGAGCCCGAGCGAGATCCCGGCCATCGTTTCAGCGGCAAAGGAAGCCGCGGGAAAGACCGCC
ATTGTCTGCGGGTGCGGATATGGGACCGAGATTGCCGTGGAGATCGCAAAATCGGTGGAGAAGGCGGGGGCTGACGGCAT
ACTTCTGCTGCCGCATTATCTCATCGACGCTCCGCAGGAGGGATTGTATGCCCACGTGAAGAAGGTGTGCCAATCGGTCG
GCTTCGGCGTCATGGTCTATAACCGCGACAATTCCGTTCTTCATACCGATACACTCGCCCGTTTGTGCGACGAATGTCCT
AACCTCATCGGTTTCAAGGACGGCACAGGCGACATCGGACTTGTCCGCCAAGTAACGTCAACCATCGGCGACAGACTTAT
GTATCTGGGCGGGATGCCGACAGCCGAGCTGTTTGCGGAAGCCTATCTTGGGGCAGGGTTCACCACATATTCGTCCGCCG
TATTCAACTTCGTGCCCGGATTAGCGAATGATTTCTATGGCGCGCTGCGCGCCGGCGAACGCGCGAAGTGCGAACAGCTT
CTCAAGGACTTTTTCTATCCCTTCATGAAGATTCGCAACCGCGGCAAGGGCTATGCGGTGTCCGCGGTAAAGGCGGGCGT
TCGAATTCAGGGCTTCGATGCGGGCCCGGTCCGGACTCCTTTGACCGATCTGACCGGAGAAGAGATGGGCAGGATGGAAG
CGCTCATTGCGCCATATCGCCGATAA

Upstream 100 bases:

>100_bases
ATGATGTCACGGATGGCTTCACCCATTGTGATCATATCTATGGTTGACACTGATATGGTCTCCTGGGTATTGTTTCATCC
AGTTCAACTTGGAGACAGAC

Downstream 100 bases:

>100_bases
GATGTAGAGCCTTTCCACGAAAAGTGCGAAGCAGTTTTCCATCCGGAACTGCGCAAAAATAGAAAGTTAGAGCGGTTCAG
CGCTTCCATCAAAAGCTGAA

Product: 5-dehydro-4-deoxyglucarate dehydratase

Products: NA

Alternate protein names: 5-keto-4-deoxy-glucarate dehydratase; KDGDH [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNPQQLKAALGSGLLSFPVTHFDRNGKFAPESYKAHVEWLASYNAPVLFAAGGTGEFFSLSPSEIPAIVSAAKEAAGKTA
IVCGCGYGTEIAVEIAKSVEKAGADGILLLPHYLIDAPQEGLYAHVKKVCQSVGFGVMVYNRDNSVLHTDTLARLCDECP
NLIGFKDGTGDIGLVRQVTSTIGDRLMYLGGMPTAELFAEAYLGAGFTTYSSAVFNFVPGLANDFYGALRAGERAKCEQL
LKDFFYPFMKIRNRGKGYAVSAVKAGVRIQGFDAGPVRTPLTDLTGEEMGRMEALIAPYRR

Sequences:

>Translated_301_residues
MNPQQLKAALGSGLLSFPVTHFDRNGKFAPESYKAHVEWLASYNAPVLFAAGGTGEFFSLSPSEIPAIVSAAKEAAGKTA
IVCGCGYGTEIAVEIAKSVEKAGADGILLLPHYLIDAPQEGLYAHVKKVCQSVGFGVMVYNRDNSVLHTDTLARLCDECP
NLIGFKDGTGDIGLVRQVTSTIGDRLMYLGGMPTAELFAEAYLGAGFTTYSSAVFNFVPGLANDFYGALRAGERAKCEQL
LKDFFYPFMKIRNRGKGYAVSAVKAGVRIQGFDAGPVRTPLTDLTGEEMGRMEALIAPYRR
>Mature_301_residues
MNPQQLKAALGSGLLSFPVTHFDRNGKFAPESYKAHVEWLASYNAPVLFAAGGTGEFFSLSPSEIPAIVSAAKEAAGKTA
IVCGCGYGTEIAVEIAKSVEKAGADGILLLPHYLIDAPQEGLYAHVKKVCQSVGFGVMVYNRDNSVLHTDTLARLCDECP
NLIGFKDGTGDIGLVRQVTSTIGDRLMYLGGMPTAELFAEAYLGAGFTTYSSAVFNFVPGLANDFYGALRAGERAKCEQL
LKDFFYPFMKIRNRGKGYAVSAVKAGVRIQGFDAGPVRTPLTDLTGEEMGRMEALIAPYRR

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI87082415, Length=243, Percent_Identity=26.3374485596708, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788823, Length=178, Percent_Identity=26.9662921348315, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786463, Length=240, Percent_Identity=26.6666666666667, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017655
- InterPro:   IPR002220 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.41 [H]

Molecular weight: Translated: 32274; Mature: 32274

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQQLKAALGSGLLSFPVTHFDRNGKFAPESYKAHVEWLASYNAPVLFAAGGTGEFFSL
CCHHHHHHHHHCCHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEC
SPSEIPAIVSAAKEAAGKTAIVCGCGYGTEIAVEIAKSVEKAGADGILLLPHYLIDAPQE
CHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCC
GLYAHVKKVCQSVGFGVMVYNRDNSVLHTDTLARLCDECPNLIGFKDGTGDIGLVRQVTS
HHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
TIGDRLMYLGGMPTAELFAEAYLGAGFTTYSSAVFNFVPGLANDFYGALRAGERAKCEQL
HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHH
LKDFFYPFMKIRNRGKGYAVSAVKAGVRIQGFDAGPVRTPLTDLTGEEMGRMEALIAPYR
HHHHHHHHHHHHCCCCCEEEHEECCCCEEECCCCCCCCCCCHHCCHHHHHHHHHHHCCCC
R
C
>Mature Secondary Structure
MNPQQLKAALGSGLLSFPVTHFDRNGKFAPESYKAHVEWLASYNAPVLFAAGGTGEFFSL
CCHHHHHHHHHCCHHHCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEC
SPSEIPAIVSAAKEAAGKTAIVCGCGYGTEIAVEIAKSVEKAGADGILLLPHYLIDAPQE
CHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCHHHHCCCCC
GLYAHVKKVCQSVGFGVMVYNRDNSVLHTDTLARLCDECPNLIGFKDGTGDIGLVRQVTS
HHHHHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
TIGDRLMYLGGMPTAELFAEAYLGAGFTTYSSAVFNFVPGLANDFYGALRAGERAKCEQL
HHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHH
LKDFFYPFMKIRNRGKGYAVSAVKAGVRIQGFDAGPVRTPLTDLTGEEMGRMEALIAPYR
HHHHHHHHHHHHCCCCCEEEHEECCCCEEECCCCCCCCCCCHHCCHHHHHHHHHHHCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]