| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895146
Identifier: 190895146
GI number: 190895146
Start: 877687
End: 879768
Strand: Reverse
Name: 190895146
Synonym: RHECIAT_PC0000816
Alternate gene names: NA
Gene position: 879768-877687 (Counterclockwise)
Preceding gene: 190895152
Following gene: 190895145
Centisome position: 80.6
GC content: 60.04
Gene sequence:
>2082_bases ATGGACAACCAAAAGGCCAGGATCGGCGTCGACATCGGCGGTACGTTTACCGACGTCGCGATGGAGTACCAAGGCAAGAT CTTCTCGACCAAGGTCCTCACGAACTATACGGCCCCTGAGGCGGCTATCATCGACGGTATCGCGGGGGTCTTGAGCGACG CCTCCCTGCCGTTCTCGGAAGTGGGTACCATCATTCACGGAACGACGCTTGCGACCAACTCGCTCATCGAGCGGCGTGGC GCCAAGACGGCCTTCGTCACGACCCGCGGCTTTCGTGACGTCATCGAAATGCGGACCGAAAACCGCTTCGAACTCTACGA TCTCAATATCGTGCTTCCCCCTGCGCTGATCCCGCGCCGCGACAGACTCGTCGTGGATGAACGCGTCGGCTCCGACGGGG AGATCTTGAAAACTCTGGACGAGGCCGAGGTTGCCGCGCTGGCTGCCTCCATCAAAGCGGGCGAATATGAAAGCGTCGCC ATCGGCTTCATGCACTCTTATGTGAACGACATTCACGAAAAGAAGGTCCGCGACATTCTCGCAGCCGAAATCCCCGGGAT TTCGATATCGATATCGAGCGAAGTCTCGCCGCAGATGCGCGAGTTCCAACGCTTCAACACCGTTTGCGCCAATGCCTATG TGAAGCCTTTGATGGCATCCTATCTCAACCGGCTTGTCGACAAACTGCGCCAAGCGGGTGCACATTGCCCCGTATTTATG ATCCATTCGGGCGGAGGCATCATTACCGTTGACAGCGCCGCTGAATTCCCGGTCCGCCTGCTAGAATCCGGGCCGGCTGG CGGCGCCATCTTCGCTGCCGAAGTTGCCAAGCGGTACGGCCTTGACCGCGTTCTCTCCTACGACATGGGCGGAACGACCG CAAAAATTTGCCTAATCGACGACGCTACGCCGAAAACCGCCAAGACGTTCGAAGTGGCGAGAACCTATCGCTTCAAAAAG GGCAGCGGCATGCCGATTTCCATCCCGGTTATCGAGATGATCGAGATCGGCGCCGGCGGCGGTTCCATCGCCTCCGTCGA TGGGATGAAGCAGATTCGTGTCGGTCCTCATAGCGCCGCATCCGAGCCTGGGCCTGCCTGTTACGGCCGCGGCGGTGACC GGCCTACGGTCACGGACGCCGATTTGCTGCTTGGCCGACTGGACGCTGACAACTTCGCAGGCGGCTCGATCAAGCTCCGT TCCGACAATTCGAAGAGCGCGCTTTCCCGCGAGGTCGGCGCCAAACTCAGCATTGACGAAAATGCCGCCGCTTTCGGCGT CTGCGAGGTCGTCGACGAAAGCATGGCGAACGCCGCCCGCATGCACGCGGTCGAAAATGGCAAGGAGCTTGCCGAGTACA GCATGATCGCGTTCGGTGGCGCCGCTCCGCTGCATGCCTCCCGGCTTTGTGAAAAGCTCGGCATGAAGGAGCTCCTGATT CCTCCGGGCGCGGGTGTCGGGTCCGCCATTGGATTTTTGCGTGCACCTATTGCCTTCGAATCCGTGCGGAGTGCCTATGT CCGCTTCGCACGGTTCGAAGCCGGCAAGGTGAATTCGGTACTGAAAGAATTGCAGGAAGAGGCCACGCGCTTCGTGCACG CGGCCGATCCAAATGCCGAGGTGGAGATGGAGTGCACAGCCTATGTCCGCTACGTCGGCCAGGGCTGGGAAATCCCGGTC ATCGTAGAAATAAGAGATTATGCGGAAAACGACGGCGCGTCTCTGCGCCAGCAGTTCGAAGACGCCTATGCCGCCTATTT CGGCCGGGCCATCGATGGTCTCGACGCGGAAATCATCAGTTGGTCGCTTCGCGCCAGTTCCCCGATCCATGAGGCGCAGC CCGTTCGGCGGGCTTCGAGGACTCATGCGGCCAAGGTGCCGACGCGACGAGAGATGTTCGACGCCCGCGCAGGAAAATAT CTGCCCGCCGACATTGTCGAGCGAACTGAGCTGAAGGTTGGCGAGTACGTCTCCGGTCCGGCGGCGATCGTGGAGCGGGA AACGACCACGATCATCTCGTCATCCTACGAGGCGATCATGCAGCCCGATGGCTGCCTGCTTGTGACTGCAAAGAACGCAT AA
Upstream 100 bases:
>100_bases CGATCTTGACCGCCAAGCCGGCTTTAGGCCGCAGATGAAAAAAGGGAACGAGCGGGCGGACGTGAATCACAATGGGTTCC CGAAGATAGGGCATAGATAG
Downstream 100 bases:
>100_bases GGAAAAGGCCATGACACAGAAACGCGATGCAATCGCCGAGATGCGGCTCCAGATCATGTGGAACAGGCTCATCTCCGTCG TCGAAGAGCAGGCTCTGACA
Product: putative 5-oxoprolinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MDNQKARIGVDIGGTFTDVAMEYQGKIFSTKVLTNYTAPEAAIIDGIAGVLSDASLPFSEVGTIIHGTTLATNSLIERRG AKTAFVTTRGFRDVIEMRTENRFELYDLNIVLPPALIPRRDRLVVDERVGSDGEILKTLDEAEVAALAASIKAGEYESVA IGFMHSYVNDIHEKKVRDILAAEIPGISISISSEVSPQMREFQRFNTVCANAYVKPLMASYLNRLVDKLRQAGAHCPVFM IHSGGGIITVDSAAEFPVRLLESGPAGGAIFAAEVAKRYGLDRVLSYDMGGTTAKICLIDDATPKTAKTFEVARTYRFKK GSGMPISIPVIEMIEIGAGGGSIASVDGMKQIRVGPHSAASEPGPACYGRGGDRPTVTDADLLLGRLDADNFAGGSIKLR SDNSKSALSREVGAKLSIDENAAAFGVCEVVDESMANAARMHAVENGKELAEYSMIAFGGAAPLHASRLCEKLGMKELLI PPGAGVGSAIGFLRAPIAFESVRSAYVRFARFEAGKVNSVLKELQEEATRFVHAADPNAEVEMECTAYVRYVGQGWEIPV IVEIRDYAENDGASLRQQFEDAYAAYFGRAIDGLDAEIISWSLRASSPIHEAQPVRRASRTHAAKVPTRREMFDARAGKY LPADIVERTELKVGEYVSGPAAIVERETTTIISSSYEAIMQPDGCLLVTAKNA
Sequences:
>Translated_693_residues MDNQKARIGVDIGGTFTDVAMEYQGKIFSTKVLTNYTAPEAAIIDGIAGVLSDASLPFSEVGTIIHGTTLATNSLIERRG AKTAFVTTRGFRDVIEMRTENRFELYDLNIVLPPALIPRRDRLVVDERVGSDGEILKTLDEAEVAALAASIKAGEYESVA IGFMHSYVNDIHEKKVRDILAAEIPGISISISSEVSPQMREFQRFNTVCANAYVKPLMASYLNRLVDKLRQAGAHCPVFM IHSGGGIITVDSAAEFPVRLLESGPAGGAIFAAEVAKRYGLDRVLSYDMGGTTAKICLIDDATPKTAKTFEVARTYRFKK GSGMPISIPVIEMIEIGAGGGSIASVDGMKQIRVGPHSAASEPGPACYGRGGDRPTVTDADLLLGRLDADNFAGGSIKLR SDNSKSALSREVGAKLSIDENAAAFGVCEVVDESMANAARMHAVENGKELAEYSMIAFGGAAPLHASRLCEKLGMKELLI PPGAGVGSAIGFLRAPIAFESVRSAYVRFARFEAGKVNSVLKELQEEATRFVHAADPNAEVEMECTAYVRYVGQGWEIPV IVEIRDYAENDGASLRQQFEDAYAAYFGRAIDGLDAEIISWSLRASSPIHEAQPVRRASRTHAAKVPTRREMFDARAGKY LPADIVERTELKVGEYVSGPAAIVERETTTIISSSYEAIMQPDGCLLVTAKNA >Mature_693_residues MDNQKARIGVDIGGTFTDVAMEYQGKIFSTKVLTNYTAPEAAIIDGIAGVLSDASLPFSEVGTIIHGTTLATNSLIERRG AKTAFVTTRGFRDVIEMRTENRFELYDLNIVLPPALIPRRDRLVVDERVGSDGEILKTLDEAEVAALAASIKAGEYESVA IGFMHSYVNDIHEKKVRDILAAEIPGISISISSEVSPQMREFQRFNTVCANAYVKPLMASYLNRLVDKLRQAGAHCPVFM IHSGGGIITVDSAAEFPVRLLESGPAGGAIFAAEVAKRYGLDRVLSYDMGGTTAKICLIDDATPKTAKTFEVARTYRFKK GSGMPISIPVIEMIEIGAGGGSIASVDGMKQIRVGPHSAASEPGPACYGRGGDRPTVTDADLLLGRLDADNFAGGSIKLR SDNSKSALSREVGAKLSIDENAAAFGVCEVVDESMANAARMHAVENGKELAEYSMIAFGGAAPLHASRLCEKLGMKELLI PPGAGVGSAIGFLRAPIAFESVRSAYVRFARFEAGKVNSVLKELQEEATRFVHAADPNAEVEMECTAYVRYVGQGWEIPV IVEIRDYAENDGASLRQQFEDAYAAYFGRAIDGLDAEIISWSLRASSPIHEAQPVRRASRTHAAKVPTRREMFDARAGKY LPADIVERTELKVGEYVSGPAAIVERETTTIISSSYEAIMQPDGCLLVTAKNA
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=741, Percent_Identity=27.6653171390013, Blast_Score=202, Evalue=1e-51, Organism=Caenorhabditis elegans, GI133901900, Length=702, Percent_Identity=24.5014245014245, Blast_Score=159, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6322634, Length=757, Percent_Identity=27.6089828269485, Blast_Score=212, Evalue=2e-55, Organism=Drosophila melanogaster, GI45550492, Length=732, Percent_Identity=25.6830601092896, Blast_Score=170, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: NA
Molecular weight: Translated: 74567; Mature: 74567
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNQKARIGVDIGGTFTDVAMEYQGKIFSTKVLTNYTAPEAAIIDGIAGVLSDASLPFSE CCCCCEEEEEEECCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHH VGTIIHGTTLATNSLIERRGAKTAFVTTRGFRDVIEMRTENRFELYDLNIVLPPALIPRR HCHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEEEEEEECCCCCCCC DRLVVDERVGSDGEILKTLDEAEVAALAASIKAGEYESVAIGFMHSYVNDIHEKKVRDIL CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAEIPGISISISSEVSPQMREFQRFNTVCANAYVKPLMASYLNRLVDKLRQAGAHCPVFM HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IHSGGGIITVDSAAEFPVRLLESGPAGGAIFAAEVAKRYGLDRVLSYDMGGTTAKICLID EECCCCEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHEECCCCCEEEEEEEE DATPKTAKTFEVARTYRFKKGSGMPISIPVIEMIEIGAGGGSIASVDGMKQIRVGPHSAA CCCCCCHHHHHHHHHHEECCCCCCEEEECCEEEEEECCCCCCEECCCCCHHEECCCCCCC SEPGPACYGRGGDRPTVTDADLLLGRLDADNFAGGSIKLRSDNSKSALSREVGAKLSIDE CCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCCCEEEEECCCCHHHHHHHHCCEEEECC NAAAFGVCEVVDESMANAARMHAVENGKELAEYSMIAFGGAAPLHASRLCEKLGMKELLI CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCHHHHHHHHHCCCCEEEC PPGAGVGSAIGFLRAPIAFESVRSAYVRFARFEAGKVNSVLKELQEEATRFVHAADPNAE CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCC VEMECTAYVRYVGQGWEIPVIVEIRDYAENDGASLRQQFEDAYAAYFGRAIDGLDAEIIS EEEEHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHE WSLRASSPIHEAQPVRRASRTHAAKVPTRREMFDARAGKYLPADIVERTELKVGEYVSGP EECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC AAIVERETTTIISSSYEAIMQPDGCLLVTAKNA HHHHCCCHHHHHHCCHHHHCCCCCEEEEEECCC >Mature Secondary Structure MDNQKARIGVDIGGTFTDVAMEYQGKIFSTKVLTNYTAPEAAIIDGIAGVLSDASLPFSE CCCCCEEEEEEECCCHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHH VGTIIHGTTLATNSLIERRGAKTAFVTTRGFRDVIEMRTENRFELYDLNIVLPPALIPRR HCHHHCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCCEEEEEEEEEECCCCCCCC DRLVVDERVGSDGEILKTLDEAEVAALAASIKAGEYESVAIGFMHSYVNDIHEKKVRDIL CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AAEIPGISISISSEVSPQMREFQRFNTVCANAYVKPLMASYLNRLVDKLRQAGAHCPVFM HHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE IHSGGGIITVDSAAEFPVRLLESGPAGGAIFAAEVAKRYGLDRVLSYDMGGTTAKICLID EECCCCEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCHHHHEECCCCCEEEEEEEE DATPKTAKTFEVARTYRFKKGSGMPISIPVIEMIEIGAGGGSIASVDGMKQIRVGPHSAA CCCCCCHHHHHHHHHHEECCCCCCEEEECCEEEEEECCCCCCEECCCCCHHEECCCCCCC SEPGPACYGRGGDRPTVTDADLLLGRLDADNFAGGSIKLRSDNSKSALSREVGAKLSIDE CCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCCCEEEEECCCCHHHHHHHHCCEEEECC NAAAFGVCEVVDESMANAARMHAVENGKELAEYSMIAFGGAAPLHASRLCEKLGMKELLI CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCHHHHHHHHHCCCCEEEC PPGAGVGSAIGFLRAPIAFESVRSAYVRFARFEAGKVNSVLKELQEEATRFVHAADPNAE CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCC VEMECTAYVRYVGQGWEIPVIVEIRDYAENDGASLRQQFEDAYAAYFGRAIDGLDAEIIS EEEEHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHE WSLRASSPIHEAQPVRRASRTHAAKVPTRREMFDARAGKYLPADIVERTELKVGEYVSGP EECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC AAIVERETTTIISSSYEAIMQPDGCLLVTAKNA HHHHCCCHHHHHHCCHHHHCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]