| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is yiaN [C]
Identifier: 190895095
GI number: 190895095
Start: 819976
End: 821235
Strand: Reverse
Name: yiaN [C]
Synonym: RHECIAT_PC0000764
Alternate gene names: 190895095
Gene position: 821235-819976 (Counterclockwise)
Preceding gene: 190895096
Following gene: 190895094
Centisome position: 75.24
GC content: 62.06
Gene sequence:
>1260_bases ATGACACTCGTCATGATCATTTCCTTCTGCATCCTCATGGTCCTCGCCGTTCCCGTCGGCTATGGGCTGATCATTGCAGC GGGGCTTGGAGTCCTGTTCAACGGTTACGTTCCGCTCTCGGTGGTCGCCCAGCAGGTCTACGACCAGACCCAGTCCTTCC CGATGCTGGCGCTTCCGTTCTTCATGCTTGCAGGCACGCTGATGCTTGGCGGCGAGTTGGGGCGTCAGCTCCTTGAACTC GCCTCGCGCGCCATGCAGCGGTGGCGAGGCGGACCGCTCTCGACCACCGTCGTATCCTCGGTCGTCTTTGGCGGCGTATC CGGTTCGGCCGTGGCGAATGCGAGTGCGCTCGGCTCCGTCCTCATCCCCTGGCAGAAGAAGCACGGGTTTCCGCCGGCGC TCTGCGCCGCCAACAACGCGACCTCCGCTGTCATCGACGTCCTCATCCCGCCTTCGATTCCGATGATCCTTTACGCTCTG ATCAGCGGCGTCAGCGTCGGTGATCTGTTCATCTCCGGCATTGTTCCGGGGCTGATCATGGCGGCGAGCTTCGTGTTCGT CTGCTGGTACGTGTCAGTAAGGCGGGGGTATGCCATTGAGGCCGTGAAGGTCCGCAAGCGCGAGCTGGCGCGGCTGGCAG TGCAAAGTTTCCCGGCAATCCTGCTGCCGATCCTGATCATCGTCTTTCTGCGATCCGGCCTGGCGACGCCGACAGAGGTC TCGGTCCTGTCGGTCGTCTACTCGCTGCTGCTCAGCATCCTCTTCTACCGTGACCTGACCTGGAAACGCTTCTGCGAGAA CATGGTGGAGGCGGGCGTCGCGACGGGCGTCGTCATGCTCGTGATCATGGGCAGCGCGGCGGTCGGCTGGGTGCTGACAT TCGATCAGGCTCCGCAGCACATGGCCGAATGGGTTTCGACGCACATCTCCAGTCCGATCGTCATCATTCTCATGATGAAC CTGATCATGCTGGTGGTCGGCATGCCGCTCGATATGCCGCCGGCGATCCTCCTGCTCGGGCCGATCTTCGTTCCTCTGGC CGATTCCATCGGCCTCGACCGGGTCCAGCTTGGACTGATGATGGTGATCAACCTCGGGATCGGGCTCTACACGCCGCCGA TCGGCACGACCCTGTTCATCTCGTCTTCAATCGCAAAGGCGCCGCTTGGCACCACGACGAACGAGCTCTGGCCGTTTTTC GGCATGGCCATGTTGCTCCTCCTTGCGGTCAGCTTCGTGCCGGCGCTGACGATCTACTGA
Upstream 100 bases:
>100_bases GCGCGGTGCTGGTGTCCATCGTCACCATCGCCGCGACCGTCCGCGTTCTCCGCCTGGGCTGGGATCACCGCCTCGAGATC AAGCCCGAGGAGATCGCGCT
Downstream 100 bases:
>100_bases GGAGCGTCCGATGAGCGAAACGTCCAAGAACGTCATCACCGTCCGAGGACTTACAAAGTCCTACGGTGCGACCTCGGTCC TCAAAGGCGTCGACTTCTCC
Product: putative C4-dicarboxylate transport system, permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MTLVMIISFCILMVLAVPVGYGLIIAAGLGVLFNGYVPLSVVAQQVYDQTQSFPMLALPFFMLAGTLMLGGELGRQLLEL ASRAMQRWRGGPLSTTVVSSVVFGGVSGSAVANASALGSVLIPWQKKHGFPPALCAANNATSAVIDVLIPPSIPMILYAL ISGVSVGDLFISGIVPGLIMAASFVFVCWYVSVRRGYAIEAVKVRKRELARLAVQSFPAILLPILIIVFLRSGLATPTEV SVLSVVYSLLLSILFYRDLTWKRFCENMVEAGVATGVVMLVIMGSAAVGWVLTFDQAPQHMAEWVSTHISSPIVIILMMN LIMLVVGMPLDMPPAILLLGPIFVPLADSIGLDRVQLGLMMVINLGIGLYTPPIGTTLFISSSIAKAPLGTTTNELWPFF GMAMLLLLAVSFVPALTIY
Sequences:
>Translated_419_residues MTLVMIISFCILMVLAVPVGYGLIIAAGLGVLFNGYVPLSVVAQQVYDQTQSFPMLALPFFMLAGTLMLGGELGRQLLEL ASRAMQRWRGGPLSTTVVSSVVFGGVSGSAVANASALGSVLIPWQKKHGFPPALCAANNATSAVIDVLIPPSIPMILYAL ISGVSVGDLFISGIVPGLIMAASFVFVCWYVSVRRGYAIEAVKVRKRELARLAVQSFPAILLPILIIVFLRSGLATPTEV SVLSVVYSLLLSILFYRDLTWKRFCENMVEAGVATGVVMLVIMGSAAVGWVLTFDQAPQHMAEWVSTHISSPIVIILMMN LIMLVVGMPLDMPPAILLLGPIFVPLADSIGLDRVQLGLMMVINLGIGLYTPPIGTTLFISSSIAKAPLGTTTNELWPFF GMAMLLLLAVSFVPALTIY >Mature_418_residues TLVMIISFCILMVLAVPVGYGLIIAAGLGVLFNGYVPLSVVAQQVYDQTQSFPMLALPFFMLAGTLMLGGELGRQLLELA SRAMQRWRGGPLSTTVVSSVVFGGVSGSAVANASALGSVLIPWQKKHGFPPALCAANNATSAVIDVLIPPSIPMILYALI SGVSVGDLFISGIVPGLIMAASFVFVCWYVSVRRGYAIEAVKVRKRELARLAVQSFPAILLPILIIVFLRSGLATPTEVS VLSVVYSLLLSILFYRDLTWKRFCENMVEAGVATGVVMLVIMGSAAVGWVLTFDQAPQHMAEWVSTHISSPIVIILMMNL IMLVVGMPLDMPPAILLLGPIFVPLADSIGLDRVQLGLMMVINLGIGLYTPPIGTTLFISSSIAKAPLGTTTNELWPFFG MAMLLLLAVSFVPALTIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the yiaN/ygiK family [H]
Homologues:
Organism=Escherichia coli, GI48994950, Length=417, Percent_Identity=29.9760191846523, Blast_Score=181, Evalue=7e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010656 - InterPro: IPR004681 [H]
Pfam domain/function: PF06808 DctM [H]
EC number: NA
Molecular weight: Translated: 44719; Mature: 44587
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVMIISFCILMVLAVPVGYGLIIAAGLGVLFNGYVPLSVVAQQVYDQTQSFPMLALPF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHH FMLAGTLMLGGELGRQLLELASRAMQRWRGGPLSTTVVSSVVFGGVSGSAVANASALGSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCHH LIPWQKKHGFPPALCAANNATSAVIDVLIPPSIPMILYALISGVSVGDLFISGIVPGLIM CCCCHHCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH AASFVFVCWYVSVRRGYAIEAVKVRKRELARLAVQSFPAILLPILIIVFLRSGLATPTEV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH SVLSVVYSLLLSILFYRDLTWKRFCENMVEAGVATGVVMLVIMGSAAVGWVLTFDQAPQH HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEECCCCHHH MAEWVSTHISSPIVIILMMNLIMLVVGMPLDMPPAILLLGPIFVPLADSIGLDRVQLGLM HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH MVINLGIGLYTPPIGTTLFISSSIAKAPLGTTTNELWPFFGMAMLLLLAVSFVPALTIY HHHHHCCCCCCCCCCHHHEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLVMIISFCILMVLAVPVGYGLIIAAGLGVLFNGYVPLSVVAQQVYDQTQSFPMLALPF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHH FMLAGTLMLGGELGRQLLELASRAMQRWRGGPLSTTVVSSVVFGGVSGSAVANASALGSV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCHH LIPWQKKHGFPPALCAANNATSAVIDVLIPPSIPMILYALISGVSVGDLFISGIVPGLIM CCCCHHCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH AASFVFVCWYVSVRRGYAIEAVKVRKRELARLAVQSFPAILLPILIIVFLRSGLATPTEV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH SVLSVVYSLLLSILFYRDLTWKRFCENMVEAGVATGVVMLVIMGSAAVGWVLTFDQAPQH HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEECCCCHHH MAEWVSTHISSPIVIILMMNLIMLVVGMPLDMPPAILLLGPIFVPLADSIGLDRVQLGLM HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH MVINLGIGLYTPPIGTTLFISSSIAKAPLGTTTNELWPFFGMAMLLLLAVSFVPALTIY HHHHHCCCCCCCCCCHHHEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]