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The map label for this gene is glxA [H]

Identifier: 190894906

GI number: 190894906

Start: 624559

End: 625572

Strand: Reverse

Name: glxA [H]

Synonym: RHECIAT_PC0000571

Alternate gene names: 190894906

Gene position: 625572-624559 (Counterclockwise)

Preceding gene: 190894907

Following gene: 190894902

Centisome position: 57.31

GC content: 61.83

Gene sequence:

>1014_bases
ATGCGACCTGAACAGCATCGATTGGTAGACGATAGCGCAAAACAGCCGGCCCGACTGAAGGTGGGGTTCGTTCTGTCGCG
GTCCTTCACGCTGTCGGCCTTCGCCTTGTTCGTGGATACGCTGAGGCTCGCCAGCGACGAGCAGGATCGGTCCGGAAGGG
TGCTTGCCGACTGGCAGGTGATCGGCAGCACGCGCCATCTGATCACCTCCAGCTGCGGCGTCCAGGTGGCGCCGACCTCG
GATTTCGTCGATCCGTCAAGGTTCGATTATATCGTCGTCGTCGGCGGTCTGCTGACGGTCGAAAACCCCGTCGACCAGCA
GACGATCACCTTCCTGCGGCAGGCAGACGCGAAGAAAGTGCCGCTGATCGGCGTGTGCACCGGTTCGTTCATCCTTGCGG
CGGCGGGCCTGATGAAACGGCACGAATCCTGCGTCAGCTGGTTGCATTACAAGGAGTTCCGGGAGCGCTTCCCGGAGCTT
GCCGTTCGCTCCGACCGGCTCTTCAATCTCGACCGGCAGCGCGGATCTTGCGCAGGGGGCAGCAGCGCTGCCGACATGGC
GGCATTGCTGGTGAGAAAATACATCAGCCGCGATGCCGAACGAAACGCGCTCGAAGTGCTTCAGATCGAGAAGGCCCGAA
CGCCATCGGATGTTCAGCCGCGGCGGCCGCTCTATGACGATTATGATGACGCCCGCGTCAAGGCGGCGATGATCACCATG
GAGCAGTTCGTCGACGGCAGCATGCCGATCGAGAAGCTCGCCGCCATGGTCGGGCTCTCAAGGCGGCAGCTGGAGCGGAT
CTTCATCGAAAAGACGGGCATGTCGCCTGCCAAGGCCTATAACCGCGTTCGCATGGAGCGGGCAAAATCGATCCTGGCCC
AGTCGAAGGCACCGCTCATCGAGATCGCACTTGATGTCGGCTTTGAAAACGCCTCGCAGTTCACCAGAACGTTCAAGCGC
ACATTCGGGCAGACGCCCTCGCAGCATCGCGCGGCGACCTTGAGAGCGCACTGA

Upstream 100 bases:

>100_bases
CGGGTGATCGGGCACAATACGATTTTCGTCGACGATCGCGATCCGCTGGCGCACGGTTTTCAAATTCGATGAGGGGCGTT
CGAAGGGGCAGGAGATGAAC

Downstream 100 bases:

>100_bases
AGCGTTTTCTTACCGGCGTCTCAGACCTCCTCCCAGGGAAAGCTGTCCAGCCGCTCGGCTCCCCTTGAGGTGATCAGGGC
CTGGGTTTCCAGTTTGATGC

Product: putative AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRPEQHRLVDDSAKQPARLKVGFVLSRSFTLSAFALFVDTLRLASDEQDRSGRVLADWQVIGSTRHLITSSCGVQVAPTS
DFVDPSRFDYIVVVGGLLTVENPVDQQTITFLRQADAKKVPLIGVCTGSFILAAAGLMKRHESCVSWLHYKEFRERFPEL
AVRSDRLFNLDRQRGSCAGGSSAADMAALLVRKYISRDAERNALEVLQIEKARTPSDVQPRRPLYDDYDDARVKAAMITM
EQFVDGSMPIEKLAAMVGLSRRQLERIFIEKTGMSPAKAYNRVRMERAKSILAQSKAPLIEIALDVGFENASQFTRTFKR
TFGQTPSQHRAATLRAH

Sequences:

>Translated_337_residues
MRPEQHRLVDDSAKQPARLKVGFVLSRSFTLSAFALFVDTLRLASDEQDRSGRVLADWQVIGSTRHLITSSCGVQVAPTS
DFVDPSRFDYIVVVGGLLTVENPVDQQTITFLRQADAKKVPLIGVCTGSFILAAAGLMKRHESCVSWLHYKEFRERFPEL
AVRSDRLFNLDRQRGSCAGGSSAADMAALLVRKYISRDAERNALEVLQIEKARTPSDVQPRRPLYDDYDDARVKAAMITM
EQFVDGSMPIEKLAAMVGLSRRQLERIFIEKTGMSPAKAYNRVRMERAKSILAQSKAPLIEIALDVGFENASQFTRTFKR
TFGQTPSQHRAATLRAH
>Mature_337_residues
MRPEQHRLVDDSAKQPARLKVGFVLSRSFTLSAFALFVDTLRLASDEQDRSGRVLADWQVIGSTRHLITSSCGVQVAPTS
DFVDPSRFDYIVVVGGLLTVENPVDQQTITFLRQADAKKVPLIGVCTGSFILAAAGLMKRHESCVSWLHYKEFRERFPEL
AVRSDRLFNLDRQRGSCAGGSSAADMAALLVRKYISRDAERNALEVLQIEKARTPSDVQPRRPLYDDYDDARVKAAMITM
EQFVDGSMPIEKLAAMVGLSRRQLERIFIEKTGMSPAKAYNRVRMERAKSILAQSKAPLIEIALDVGFENASQFTRTFKR
TFGQTPSQHRAATLRAH

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37738; Mature: 37738

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPEQHRLVDDSAKQPARLKVGFVLSRSFTLSAFALFVDTLRLASDEQDRSGRVLADWQV
CCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEE
IGSTRHLITSSCGVQVAPTSDFVDPSRFDYIVVVGGLLTVENPVDQQTITFLRQADAKKV
CCCHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHCCCCCC
PLIGVCTGSFILAAAGLMKRHESCVSWLHYKEFRERFPELAVRSDRLFNLDRQRGSCAGG
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
SSAADMAALLVRKYISRDAERNALEVLQIEKARTPSDVQPRRPLYDDYDDARVKAAMITM
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EQFVDGSMPIEKLAAMVGLSRRQLERIFIEKTGMSPAKAYNRVRMERAKSILAQSKAPLI
HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
EIALDVGFENASQFTRTFKRTFGQTPSQHRAATLRAH
EEEEECCCCCHHHHHHHHHHHHCCCCCHHCCEECCCC
>Mature Secondary Structure
MRPEQHRLVDDSAKQPARLKVGFVLSRSFTLSAFALFVDTLRLASDEQDRSGRVLADWQV
CCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEE
IGSTRHLITSSCGVQVAPTSDFVDPSRFDYIVVVGGLLTVENPVDQQTITFLRQADAKKV
CCCHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHCCCCCC
PLIGVCTGSFILAAAGLMKRHESCVSWLHYKEFRERFPELAVRSDRLFNLDRQRGSCAGG
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCC
SSAADMAALLVRKYISRDAERNALEVLQIEKARTPSDVQPRRPLYDDYDDARVKAAMITM
CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EQFVDGSMPIEKLAAMVGLSRRQLERIFIEKTGMSPAKAYNRVRMERAKSILAQSKAPLI
HHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEE
EIALDVGFENASQFTRTFKRTFGQTPSQHRAATLRAH
EEEEECCCCCHHHHHHHHHHHHCCCCCHHCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]