Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190894848

Identifier: 190894848

GI number: 190894848

Start: 557513

End: 559306

Strand: Reverse

Name: 190894848

Synonym: RHECIAT_PC0000513

Alternate gene names: NA

Gene position: 559306-557513 (Counterclockwise)

Preceding gene: 190894856

Following gene: 190894847

Centisome position: 51.24

GC content: 62.65

Gene sequence:

>1794_bases
ATGTTCAGCGAGATTTCAGGGCGGCTGCCTGACATTCTGGGCGACTTCATGCCCGGAGCGGTGCGTTCCGATCGTGAGCG
CTGGAGTGCGGTGCCGCCGGCGACGCGCGATGCCGTTCTTTGCGATGCCGAGGCTGCGGTTGCGCGCGCCTGGCCTCTGA
TCATGGCTTCCGATTACCGGGAATATACTGCGACCGGCAACCGCTCTCGTTTTGAGGAACTTTATTTCACCCGGCGGCGG
ATGCTCAACGATCTGGTGCTGGGCGAACTCGTCGAGGGGGGCGGGCGGTTTCTGCCTGACATCGTCGACGGCATCTTCCT
GATAGCGGAGGAGAGCGGCTGGCAACTTCCGGCCCACAATGCCTATGAACGCAGTGGCGCGCGGCTGCCGCTTCCCGACA
ATTCGCAGCCCGTTATTGATCTCTTCGCCGCCGAAACGGCGGCGCTGCTCGCCACGATCGTCGCCCTGCTGGGCACAGCG
CTCGACGACCTCAGCCCGGAGGTTACGGCACGGGTGCGGCGCGAGATCGAGAGCCGCATTCTCCGGCCCTATCTCGGCCG
GCATTTCTGGTGGATGGGGCGGGGCAGTGAGCGGATGAACAATTGGACGGCCTGGATTACCCAGAACGTCCTGCTGGCGA
CCTTCTCCCTGCACACCGATCAGGCGACGCGCCGGGCGGTCGTCGAGAAGGCGCTCGCCAGCCTCGACGCCTTCCTGAAG
GACTATGCGGAGGATGGGGCTTGTGAAGAAGGTGTGCTTTACTACCGCCACGCCGCTCTCTGCCTCCACGGCGCCGTGAC
CATTCTCGACAGCGTGGCGCCGGGCGCGTTTGCCGGGATCTGGCAGCAGCCGAAGATCCGCAACATGGCCGAGTACATCG
CAAACATGCATGTGGCCGGTCGCCATTATTTCAACTTCGCGGATTCCTCCGCCGTCGTCGAACCCTGCAGCGCGCGCGAG
TACTTGTTTGGAAAAGCGGTCGGTTCGCCGATGCTGGCGGACTTCGCGGCGACCGATAGGGCGGCGGCCGAACGCCCGCA
TTTGCCGGAGGAGTGGAATCTCTGGTACCGCGTGCAGGAGTTGCTGGTTGGTCATCGGATCCCCCGGACCGAAGCGAAAC
CGGCGCTCCAGGGTGATATTTTCTACCCCGGCATCGGCCTGTTCATCGCTCGCGACGAGCAGTTTTCGCTTGCAGTGAAG
GGCGGCAACAATGGCGAGGGCCACAATCACAACGATGTCGGCAGTGTGACGCTCTATAAGATCGGACGCCCGTTCCTGAT
CGATGTCGGCGTCGAGACCTATACGGCCAAGACCTTCTCCCCGCAGCGCTACGAGATCTGGACGATGCAGTCGGCCTATC
ACAACCTGCCGACATTCGAAGATGTCATGCAGTGCGCCGGTGAAGCCTTCGGCGCAAGGGATGTCGAAGTCGCATTCGGC
GAGGAGAGTGCGCGCGCATCTCTGGAAATATCCGGCGCCTATCCCGCGGAAGCACAGCTGCGCAGCTATCGCCGCACCGT
CTCCCTGTTGCGCGGCCGCTGTGTGGAGATTGTCGACGCTTATGACGGAGATCGATCGGCAGTGCTGTCGCTGATGACGT
GCCTGGCGCCGACCGTCACTGCGGAGAGGATCAATCTCGCAGACCTCGGCAGCATTTTCGTGGGCGGCGCCGGTACGATC
GAAGTCGACGAGATCGCAGTGAATGACGCCAGGCTGAGATCGGCCTGGCCCGAGAAGCTATACAGGCTGCGTCTGCCGTT
TGCCGGCAGGCTCCTGAAATTGCGAATAAATTAA

Upstream 100 bases:

>100_bases
CTGAATAGATCATACAAATTTTATGGCAAGTGGCAAAAACATATGATAGGTGGACATAAAGATCAGAGGCTCGTCGCAGC
TTTCCGGCGCAGGGAGGAAC

Downstream 100 bases:

>100_bases
ATGGTCAGAACATGATGTTGTCCGAAAACCACTCACGCTTTTCGGCATCATGCTCTGAGGAGGGCGAGCATGGAATTGAC
GCTGAAAATCGTGGACGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MFSEISGRLPDILGDFMPGAVRSDRERWSAVPPATRDAVLCDAEAAVARAWPLIMASDYREYTATGNRSRFEELYFTRRR
MLNDLVLGELVEGGGRFLPDIVDGIFLIAEESGWQLPAHNAYERSGARLPLPDNSQPVIDLFAAETAALLATIVALLGTA
LDDLSPEVTARVRREIESRILRPYLGRHFWWMGRGSERMNNWTAWITQNVLLATFSLHTDQATRRAVVEKALASLDAFLK
DYAEDGACEEGVLYYRHAALCLHGAVTILDSVAPGAFAGIWQQPKIRNMAEYIANMHVAGRHYFNFADSSAVVEPCSARE
YLFGKAVGSPMLADFAATDRAAAERPHLPEEWNLWYRVQELLVGHRIPRTEAKPALQGDIFYPGIGLFIARDEQFSLAVK
GGNNGEGHNHNDVGSVTLYKIGRPFLIDVGVETYTAKTFSPQRYEIWTMQSAYHNLPTFEDVMQCAGEAFGARDVEVAFG
EESARASLEISGAYPAEAQLRSYRRTVSLLRGRCVEIVDAYDGDRSAVLSLMTCLAPTVTAERINLADLGSIFVGGAGTI
EVDEIAVNDARLRSAWPEKLYRLRLPFAGRLLKLRIN

Sequences:

>Translated_597_residues
MFSEISGRLPDILGDFMPGAVRSDRERWSAVPPATRDAVLCDAEAAVARAWPLIMASDYREYTATGNRSRFEELYFTRRR
MLNDLVLGELVEGGGRFLPDIVDGIFLIAEESGWQLPAHNAYERSGARLPLPDNSQPVIDLFAAETAALLATIVALLGTA
LDDLSPEVTARVRREIESRILRPYLGRHFWWMGRGSERMNNWTAWITQNVLLATFSLHTDQATRRAVVEKALASLDAFLK
DYAEDGACEEGVLYYRHAALCLHGAVTILDSVAPGAFAGIWQQPKIRNMAEYIANMHVAGRHYFNFADSSAVVEPCSARE
YLFGKAVGSPMLADFAATDRAAAERPHLPEEWNLWYRVQELLVGHRIPRTEAKPALQGDIFYPGIGLFIARDEQFSLAVK
GGNNGEGHNHNDVGSVTLYKIGRPFLIDVGVETYTAKTFSPQRYEIWTMQSAYHNLPTFEDVMQCAGEAFGARDVEVAFG
EESARASLEISGAYPAEAQLRSYRRTVSLLRGRCVEIVDAYDGDRSAVLSLMTCLAPTVTAERINLADLGSIFVGGAGTI
EVDEIAVNDARLRSAWPEKLYRLRLPFAGRLLKLRIN
>Mature_597_residues
MFSEISGRLPDILGDFMPGAVRSDRERWSAVPPATRDAVLCDAEAAVARAWPLIMASDYREYTATGNRSRFEELYFTRRR
MLNDLVLGELVEGGGRFLPDIVDGIFLIAEESGWQLPAHNAYERSGARLPLPDNSQPVIDLFAAETAALLATIVALLGTA
LDDLSPEVTARVRREIESRILRPYLGRHFWWMGRGSERMNNWTAWITQNVLLATFSLHTDQATRRAVVEKALASLDAFLK
DYAEDGACEEGVLYYRHAALCLHGAVTILDSVAPGAFAGIWQQPKIRNMAEYIANMHVAGRHYFNFADSSAVVEPCSARE
YLFGKAVGSPMLADFAATDRAAAERPHLPEEWNLWYRVQELLVGHRIPRTEAKPALQGDIFYPGIGLFIARDEQFSLAVK
GGNNGEGHNHNDVGSVTLYKIGRPFLIDVGVETYTAKTFSPQRYEIWTMQSAYHNLPTFEDVMQCAGEAFGARDVEVAFG
EESARASLEISGAYPAEAQLRSYRRTVSLLRGRCVEIVDAYDGDRSAVLSLMTCLAPTVTAERINLADLGSIFVGGAGTI
EVDEIAVNDARLRSAWPEKLYRLRLPFAGRLLKLRIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66273; Mature: 66273

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSEISGRLPDILGDFMPGAVRSDRERWSAVPPATRDAVLCDAEAAVARAWPLIMASDYR
CCCCCCCCCHHHHHHHCCCHHHCCHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCH
EYTATGNRSRFEELYFTRRRMLNDLVLGELVEGGGRFLPDIVDGIFLIAEESGWQLPAHN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCCCCCCCCC
AYERSGARLPLPDNSQPVIDLFAAETAALLATIVALLGTALDDLSPEVTARVRREIESRI
CHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LRPYLGRHFWWMGRGSERMNNWTAWITQNVLLATFSLHTDQATRRAVVEKALASLDAFLK
HHHHHCCCEEEECCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
DYAEDGACEEGVLYYRHAALCLHGAVTILDSVAPGAFAGIWQQPKIRNMAEYIANMHVAG
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCC
RHYFNFADSSAVVEPCSAREYLFGKAVGSPMLADFAATDRAAAERPHLPEEWNLWYRVQE
CEEECCCCCCCHHCCCCCHHHHHHHHCCCCHHHHHHHHCHHHHCCCCCCHHHHHHHHHHH
LLVGHRIPRTEAKPALQGDIFYPGIGLFIARDEQFSLAVKGGNNGEGHNHNDVGSVTLYK
HHHCCCCCCCCCCCCCCCCEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEE
IGRPFLIDVGVETYTAKTFSPQRYEIWTMQSAYHNLPTFEDVMQCAGEAFGARDVEVAFG
CCCCEEEEECCCEEEECCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC
EESARASLEISGAYPAEAQLRSYRRTVSLLRGRCVEIVDAYDGDRSAVLSLMTCLAPTVT
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCHH
AERINLADLGSIFVGGAGTIEVDEIAVNDARLRSAWPEKLYRLRLPFAGRLLKLRIN
HHHCCHHHHCCEEECCCCCEEEHHEECCHHHHHHHHHHHHHEECCCCCCCEEEEEEC
>Mature Secondary Structure
MFSEISGRLPDILGDFMPGAVRSDRERWSAVPPATRDAVLCDAEAAVARAWPLIMASDYR
CCCCCCCCCHHHHHHHCCCHHHCCHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCH
EYTATGNRSRFEELYFTRRRMLNDLVLGELVEGGGRFLPDIVDGIFLIAEESGWQLPAHN
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEEECCCCCCCCCCC
AYERSGARLPLPDNSQPVIDLFAAETAALLATIVALLGTALDDLSPEVTARVRREIESRI
CHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LRPYLGRHFWWMGRGSERMNNWTAWITQNVLLATFSLHTDQATRRAVVEKALASLDAFLK
HHHHHCCCEEEECCCHHHHHHHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
DYAEDGACEEGVLYYRHAALCLHGAVTILDSVAPGAFAGIWQQPKIRNMAEYIANMHVAG
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCC
RHYFNFADSSAVVEPCSAREYLFGKAVGSPMLADFAATDRAAAERPHLPEEWNLWYRVQE
CEEECCCCCCCHHCCCCCHHHHHHHHCCCCHHHHHHHHCHHHHCCCCCCHHHHHHHHHHH
LLVGHRIPRTEAKPALQGDIFYPGIGLFIARDEQFSLAVKGGNNGEGHNHNDVGSVTLYK
HHHCCCCCCCCCCCCCCCCEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEE
IGRPFLIDVGVETYTAKTFSPQRYEIWTMQSAYHNLPTFEDVMQCAGEAFGARDVEVAFG
CCCCEEEEECCCEEEECCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEC
EESARASLEISGAYPAEAQLRSYRRTVSLLRGRCVEIVDAYDGDRSAVLSLMTCLAPTVT
CCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCCHH
AERINLADLGSIFVGGAGTIEVDEIAVNDARLRSAWPEKLYRLRLPFAGRLLKLRIN
HHHCCHHHHCCEEECCCCCEEEHHEECCHHHHHHHHHHHHHEECCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA