| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894812
Identifier: 190894812
GI number: 190894812
Start: 514069
End: 514677
Strand: Reverse
Name: 190894812
Synonym: RHECIAT_PC0000477
Alternate gene names: NA
Gene position: 514677-514069 (Counterclockwise)
Preceding gene: 190894814
Following gene: 190894811
Centisome position: 47.15
GC content: 61.58
Gene sequence:
>609_bases ATGATGAAGCGCATATTTTCAGTCGTTCTTGCATTGATCCTTCCGGTGCAGTCAGCCGTTTCTCAAGCCCCCGACGAGGC GCAAGCCCGCAAAGCGCGGTCTATCGCCCAGCTTCAGTCGGAAGGTGTGCCGACCATCGATCATCTGCCGACCATCGAGA CGGAGAGCGACAGCACCCGCCGCGATACGAAGGCTGTCGCTCAGCGCGCCATCGCGCTTGTAATCGTTGCCGTGAAAGGC GAGACCGGCGACCACGCCATGGGCCAGACCCTCATCCGGCAGTTCGACGCGGCACGTTTCTTCACTCCGAAAGAACGGGC ATTCATGGACGACCCCAATCCGTCGGAGCAGGACCGGGTGAATTTCGCCTGGCGCTACGAAGGCGTTCACGTCCTGTTAT GGGCGCTCGGGATTGCGCCGGAGCTCGAACGTCCCGATCATATTTGCGACGTACCGTCCATCGCGAACACGCTCAGGGAG CTGGGGACGCACGGGCTGATGCGTCGCGCTAAGCTGCGCCCGCAAAAGGAGCTGCTCGACGCCGCCGCCCTCAACTGGCT GATCGGCTACCTGGATCAGGACTGGGACGATATCTCCACGGACACATGA
Upstream 100 bases:
>100_bases TTACCAGTTTTGCGGGAACCTGCCGCCCCTTGCGTGTTCATGATCACGTTCAGACGGGAAAATGCCTATCGATGGGCGTC AGAGTTGATAGGAGCCAGTC
Downstream 100 bases:
>100_bases TGCTTCCTGCGTCCAATCGGCTTCCACCAAGGCGGATGCATGTTTGGTGAAATGGCATTATGATCGCTAGGTCGCGGATC GGCGAGGAGGTCGGCCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MMKRIFSVVLALILPVQSAVSQAPDEAQARKARSIAQLQSEGVPTIDHLPTIETESDSTRRDTKAVAQRAIALVIVAVKG ETGDHAMGQTLIRQFDAARFFTPKERAFMDDPNPSEQDRVNFAWRYEGVHVLLWALGIAPELERPDHICDVPSIANTLRE LGTHGLMRRAKLRPQKELLDAAALNWLIGYLDQDWDDISTDT
Sequences:
>Translated_202_residues MMKRIFSVVLALILPVQSAVSQAPDEAQARKARSIAQLQSEGVPTIDHLPTIETESDSTRRDTKAVAQRAIALVIVAVKG ETGDHAMGQTLIRQFDAARFFTPKERAFMDDPNPSEQDRVNFAWRYEGVHVLLWALGIAPELERPDHICDVPSIANTLRE LGTHGLMRRAKLRPQKELLDAAALNWLIGYLDQDWDDISTDT >Mature_202_residues MMKRIFSVVLALILPVQSAVSQAPDEAQARKARSIAQLQSEGVPTIDHLPTIETESDSTRRDTKAVAQRAIALVIVAVKG ETGDHAMGQTLIRQFDAARFFTPKERAFMDDPNPSEQDRVNFAWRYEGVHVLLWALGIAPELERPDHICDVPSIANTLRE LGTHGLMRRAKLRPQKELLDAAALNWLIGYLDQDWDDISTDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22580; Mature: 22580
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKRIFSVVLALILPVQSAVSQAPDEAQARKARSIAQLQSEGVPTIDHLPTIETESDSTR CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH RDTKAVAQRAIALVIVAVKGETGDHAMGQTLIRQFDAARFFTPKERAFMDDPNPSEQDRV HHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHCC NFAWRYEGVHVLLWALGIAPELERPDHICDVPSIANTLRELGTHGLMRRAKLRPQKELLD CEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAALNWLIGYLDQDWDDISTDT HHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMKRIFSVVLALILPVQSAVSQAPDEAQARKARSIAQLQSEGVPTIDHLPTIETESDSTR CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHH RDTKAVAQRAIALVIVAVKGETGDHAMGQTLIRQFDAARFFTPKERAFMDDPNPSEQDRV HHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHCC NFAWRYEGVHVLLWALGIAPELERPDHICDVPSIANTLRELGTHGLMRRAKLRPQKELLD CEEEEECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH AAALNWLIGYLDQDWDDISTDT HHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA