| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is thuAc
Identifier: 190894734
GI number: 190894734
Start: 424101
End: 424886
Strand: Reverse
Name: thuAc
Synonym: RHECIAT_PC0000399
Alternate gene names: NA
Gene position: 424886-424101 (Counterclockwise)
Preceding gene: 190894735
Following gene: 190894733
Centisome position: 38.93
GC content: 63.87
Gene sequence:
>786_bases ATGACCATTCGCACCATTGTGTGGGGTGAAAACATCCACGAGAATACCAATGCGATCGTCCGGGGCATCTATCCCGAGGG CATGCATACGACGATCGCCAATGCGCTGAATGCCGATCCCGCCATCTCGGCGACGACGGCGACGCTGCAGGAGCCGGAGC ACGGTCTCAGCGAAGCCCGCCTTGCCGAGACCGATGTGCTGACCTGGTGGGGCCACAAGGATCACGGCGCGGTCTCCGAC GACGTCGTCGAGCGCGTCGCCAGGCGCGTCTGGGAGGGCATGGGCCTGCTGGTGCTGCATTCCGGCCATTTCTCCAAGAT CTTCAAACGGCTGATGGGCACGCCCTGCGCGCTGAAATGGCGTGAGGCGGGCGAACGCGAGCGGCTGTGGACGATCAATC CGCGCCATCCGATCGCCGCCGGCATCGGTGAGCATTTCGAGCTGGAGAACGAGGAAATGTACGGCGAGCAGTTCTCGGTG CCGGAGCCGCTGGAAACGGTGTTCATCTCCTGGTTCCAGGGCGGCGAAGTGTTCCGCTCGGGCCTGACCTGGCGGCGCGG GGCCGGCAACATCTTCTACTTCCGCCCCGGCCACGAGACCTATCCGACCTATCACGACGCCACCGTCCAGAAGGTGCTGA TCAATGGCGTCAAGTGGGCCTACAACCCCGAGGGCGCGTTGACTGCCATTACCGACGCTCCAAATGTGCCGGTAGAAAAG GCGCTGGAGCCGATCGTCGAACGCGGCCCGAAACTGCACCAGGCCGGCGAAGCCGGTTACCGGTAA
Upstream 100 bases:
>100_bases GCCGTGCGCTCGAACGTCAATCGATGCAGGCTGCCTGAACTTTCAGGGATCAATGTTCCCCCCAAGGCCCGATCCGTTTT TATGACAAGGAGAGAATGAC
Downstream 100 bases:
>100_bases TAGATGAGATGCCGTGGGCAGGGCCCGTTTGGCCCCGCAAGACGCCGCGATGATCTCGCGGCCGCTCACGCTTTGATGGA TAACGATGAGGATAAAAGAA
Product: trehalosemaltose utilization protein
Products: NA
Alternate protein names: Trehalose Utilization-Related Protein; ThuA-Like Protein; Trehalosemaltose Utilization Protein; Sugar Uptake Related Protein; ThuA Protein; THUA Protein; Trehalose Utilization Protein Homolog
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTIRTIVWGENIHENTNAIVRGIYPEGMHTTIANALNADPAISATTATLQEPEHGLSEARLAETDVLTWWGHKDHGAVSD DVVERVARRVWEGMGLLVLHSGHFSKIFKRLMGTPCALKWREAGERERLWTINPRHPIAAGIGEHFELENEEMYGEQFSV PEPLETVFISWFQGGEVFRSGLTWRRGAGNIFYFRPGHETYPTYHDATVQKVLINGVKWAYNPEGALTAITDAPNVPVEK ALEPIVERGPKLHQAGEAGYR
Sequences:
>Translated_261_residues MTIRTIVWGENIHENTNAIVRGIYPEGMHTTIANALNADPAISATTATLQEPEHGLSEARLAETDVLTWWGHKDHGAVSD DVVERVARRVWEGMGLLVLHSGHFSKIFKRLMGTPCALKWREAGERERLWTINPRHPIAAGIGEHFELENEEMYGEQFSV PEPLETVFISWFQGGEVFRSGLTWRRGAGNIFYFRPGHETYPTYHDATVQKVLINGVKWAYNPEGALTAITDAPNVPVEK ALEPIVERGPKLHQAGEAGYR >Mature_260_residues TIRTIVWGENIHENTNAIVRGIYPEGMHTTIANALNADPAISATTATLQEPEHGLSEARLAETDVLTWWGHKDHGAVSDD VVERVARRVWEGMGLLVLHSGHFSKIFKRLMGTPCALKWREAGERERLWTINPRHPIAAGIGEHFELENEEMYGEQFSVP EPLETVFISWFQGGEVFRSGLTWRRGAGNIFYFRPGHETYPTYHDATVQKVLINGVKWAYNPEGALTAITDAPNVPVEKA LEPIVERGPKLHQAGEAGYR
Specific function: Unknown
COG id: COG4813
COG function: function code G; Trehalose utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29272; Mature: 29141
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRTIVWGENIHENTNAIVRGIYPEGMHTTIANALNADPAISATTATLQEPEHGLSEAR CEEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHH LAETDVLTWWGHKDHGAVSDDVVERVARRVWEGMGLLVLHSGHFSKIFKRLMGTPCALKW HHHCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEH REAGERERLWTINPRHPIAAGIGEHFELENEEMYGEQFSVPEPLETVFISWFQGGEVFRS HHCCCCCCEEEECCCCCHHHCCCCCEECCCHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH GLTWRRGAGNIFYFRPGHETYPTYHDATVQKVLINGVKWAYNPEGALTAITDAPNVPVEK CCCEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCHHH ALEPIVERGPKLHQAGEAGYR HHHHHHHCCCCCHHCCCCCCC >Mature Secondary Structure TIRTIVWGENIHENTNAIVRGIYPEGMHTTIANALNADPAISATTATLQEPEHGLSEAR EEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHHH LAETDVLTWWGHKDHGAVSDDVVERVARRVWEGMGLLVLHSGHFSKIFKRLMGTPCALKW HHHCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEH REAGERERLWTINPRHPIAAGIGEHFELENEEMYGEQFSVPEPLETVFISWFQGGEVFRS HHCCCCCCEEEECCCCCHHHCCCCCEECCCHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH GLTWRRGAGNIFYFRPGHETYPTYHDATVQKVLINGVKWAYNPEGALTAITDAPNVPVEK CCCEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCHHH ALEPIVERGPKLHQAGEAGYR HHHHHHHCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA