Click here to switch to the map view.

The map label for this gene is yecS [H]

Identifier: 190894720

GI number: 190894720

Start: 407967

End: 408812

Strand: Reverse

Name: yecS [H]

Synonym: RHECIAT_PC0000385

Alternate gene names: 190894720

Gene position: 408812-407967 (Counterclockwise)

Preceding gene: 190894721

Following gene: 190894719

Centisome position: 37.45

GC content: 58.27

Gene sequence:

>846_bases
ATGCGTCCCGTCATCGGCGATCCCGCTGCCAGCGGCTTTTACGGTCGTTTCGCCATCGCTTTCGTCATCGCCTTGCTGTT
GGTTTTGAATGTCGTGCTGATCGGCTTTGCGTCCCTGCGGGTGCAGATCGCCATTGTCTGGCTGGAACTGCTCGGCCTCT
TTTTGGCGTTCTTTGCGACATTCCATCTGAGCCTGCCGTTCATCGCCGAAAAACTGCCGTTCATGATCACCCAGGGCCTG
GTGACGACGATCTACGTCTCTGCCGTCTCAATCGTGATCGCCTCGGCAATTGCTATATTGGGTGCCGTCGCCAAGCTCTC
CACCAACGGCTTCGCCTATGCGATTGCCAGTTTCTACACCTCGTTCTTCCGCGGCCTTCCGCTGCTGATGCAGGTCTATC
TGATCTATCTCGGCTTGCCGCAGCTGGGCTTCGTCATCGACGCAGTGCCCGCCGGTATTCTTGCGCTCTCGCTCTGCTAC
GGCGCCTATATGACCGAGATCTTCCGTTCGGGCATTCAGAGCATCGATCGCGGCCAGTGGGAGGCCTCACGCTCGATCGG
CTTCGGCTTCGGCATCACCATGCGCAAGATCATCCTGCCGCAGGCGCTGCCCGTCATCATTCCGCCGACCGGCAACCAGT
TCATCTCGATGCTGAAGGACAGCTCGCTGGTCTCCGTCATCGGCGTCTGGGAATTGATGTTCCTGGCCCGCACGCTGGGC
CAGAAGACTTTCCAGCACATGGAAATGCTGATTTCCGCCGCCATGCTCTACTGGATCATGTCGATCGGCCTCGAACTTAT
CCAAGCGCGTATCGAACGTCACTATGCCAGGAGCAAAGTCCGATGA

Upstream 100 bases:

>100_bases
AGTACTCGTCCATAAGCCGTGGTTCGTCGTGACGCTGTTTGCCATGGCGCTGGCGTTTTTGCTGATGTTCAATATGACCG
GTACGACGATGGGCGAATTG

Downstream 100 bases:

>100_bases
ACGGCGACAAGATCATTGAAGCAAAAAACGTTTCGAAGTGGTACGGCGCTTTTCAGGTGCTGAAGGATATCAATCTCACG
GTCAGCAAGGGCGAGCGGAT

Product: putative amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRPVIGDPAASGFYGRFAIAFVIALLLVLNVVLIGFASLRVQIAIVWLELLGLFLAFFATFHLSLPFIAEKLPFMITQGL
VTTIYVSAVSIVIASAIAILGAVAKLSTNGFAYAIASFYTSFFRGLPLLMQVYLIYLGLPQLGFVIDAVPAGILALSLCY
GAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTLG
QKTFQHMEMLISAAMLYWIMSIGLELIQARIERHYARSKVR

Sequences:

>Translated_281_residues
MRPVIGDPAASGFYGRFAIAFVIALLLVLNVVLIGFASLRVQIAIVWLELLGLFLAFFATFHLSLPFIAEKLPFMITQGL
VTTIYVSAVSIVIASAIAILGAVAKLSTNGFAYAIASFYTSFFRGLPLLMQVYLIYLGLPQLGFVIDAVPAGILALSLCY
GAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTLG
QKTFQHMEMLISAAMLYWIMSIGLELIQARIERHYARSKVR
>Mature_281_residues
MRPVIGDPAASGFYGRFAIAFVIALLLVLNVVLIGFASLRVQIAIVWLELLGLFLAFFATFHLSLPFIAEKLPFMITQGL
VTTIYVSAVSIVIASAIAILGAVAKLSTNGFAYAIASFYTSFFRGLPLLMQVYLIYLGLPQLGFVIDAVPAGILALSLCY
GAYMTEIFRSGIQSIDRGQWEASRSIGFGFGITMRKIILPQALPVIIPPTGNQFISMLKDSSLVSVIGVWELMFLARTLG
QKTFQHMEMLISAAMLYWIMSIGLELIQARIERHYARSKVR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=216, Percent_Identity=38.4259259259259, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1787030, Length=205, Percent_Identity=32.6829268292683, Blast_Score=100, Evalue=9e-23,
Organism=Escherichia coli, GI1786873, Length=219, Percent_Identity=31.0502283105023, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788646, Length=213, Percent_Identity=30.9859154929577, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788645, Length=207, Percent_Identity=31.8840579710145, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI87082239, Length=223, Percent_Identity=28.2511210762332, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI48994930, Length=164, Percent_Identity=37.1951219512195, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1787087, Length=223, Percent_Identity=27.3542600896861, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786874, Length=212, Percent_Identity=25.9433962264151, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787086, Length=217, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30902; Mature: 30902

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]