| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894712
Identifier: 190894712
GI number: 190894712
Start: 401083
End: 401862
Strand: Reverse
Name: 190894712
Synonym: RHECIAT_PC0000377
Alternate gene names: NA
Gene position: 401862-401083 (Counterclockwise)
Preceding gene: 190894713
Following gene: 190894711
Centisome position: 36.82
GC content: 64.36
Gene sequence:
>780_bases ATGACCGCAGCAATCGAAATCATTTCCGCCGGCCGTCGGCCACGGCTGGACGACAGGCCGCTCGAAAAGCGCATCGGCCT CGTCATCCTGGCGACCGATCACACGAGCGAGGTTGACTTCCGGCGCATGGTCGCCAGCGACCGCATCGGCGTCTATGTCA GCCGCATCCACTATGCCAATCCGGTGACGCCGGAAAATCTTCTGAAAATGCGGCCGTCGTTAACGGAGGGCGCCGGCCTG ATCCTGCCGGATGAGACGCTGGATGCGGTCATGTATTCCTGCACCTCCGCCTCGGTCGTCATCGGCGATCGCGATATCGA AGCGGCGATCCATTTGTCCAAACCCGGCGTTCCCGTGGTGACGCCGACGGCGGCGGCCGTTAAGGGCCTGAAGGCGCTCG GCGCCCGCCGGATTTCGGTGCTGACGCCCTATACGATCGAAACCAGCCGGCCGGTGGCGGATTATTTTGACGATCTCGGT TTCATGATCGATCGTTTCACCTGCCTTGGCCTCAGCGACGACCGGGAGATGGCCCGGATTGCCCCGGATGAGATCGCCGC CTTCGCGCGTGAGGCGCTGGCGCCGCAGTCGGATGCGCTGTTCATTTCCTGCACTGCTCTGCGCGCCGCACAAGTCGCCG CCCGCATCGAAGCCGAGACCGGCAAGCCGGTGGTGACCAGCAACCTCGCAACCGCCTGGGCCTGTCTGAGGCTTTGCGGC GATGATCGGCCGCAGCCCGAACTCGGTCAGCTGATGGCCAGGCCCTATCGGGAAGGCTGA
Upstream 100 bases:
>100_bases CCGATGACGCTCGTCGGCGTCTTCTTCCTCGTCATCAGCCTGGTCTCGGTCGTGGGCTTGCGCTGGCTCGAGGAGCGCTA CGCCAGGATGGATGACTGAG
Downstream 100 bases:
>100_bases GATCATGGTGGCCACCTTGCCCGTTTCACTGCAGGACATTCGCGCGGCCGCGAGGCGGATCGCCGGCCGGGTTCTCGCAA CGCCGATGGTGCAATCCGCA
Product: putative arylmalonate decarboxylase
Products: NA
Alternate protein names: Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase; Asp/Glu/Hydantoin Racemase Family Protein; Maleate Cis-Trans Isomerase; Ectoine Utilization Protein EutA; Arylmalonate Decarboxylase Protein; Asp/Glu/Hydantoin Racemase Superfamily; Decarboxylase; Asp/Glu/Hydantoin Racemase Family; Racemase; Isomerase; Pyridoxal-5-Phosphate-Dependent Beta Subunit
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MTAAIEIISAGRRPRLDDRPLEKRIGLVILATDHTSEVDFRRMVASDRIGVYVSRIHYANPVTPENLLKMRPSLTEGAGL ILPDETLDAVMYSCTSASVVIGDRDIEAAIHLSKPGVPVVTPTAAAVKGLKALGARRISVLTPYTIETSRPVADYFDDLG FMIDRFTCLGLSDDREMARIAPDEIAAFAREALAPQSDALFISCTALRAAQVAARIEAETGKPVVTSNLATAWACLRLCG DDRPQPELGQLMARPYREG
Sequences:
>Translated_259_residues MTAAIEIISAGRRPRLDDRPLEKRIGLVILATDHTSEVDFRRMVASDRIGVYVSRIHYANPVTPENLLKMRPSLTEGAGL ILPDETLDAVMYSCTSASVVIGDRDIEAAIHLSKPGVPVVTPTAAAVKGLKALGARRISVLTPYTIETSRPVADYFDDLG FMIDRFTCLGLSDDREMARIAPDEIAAFAREALAPQSDALFISCTALRAAQVAARIEAETGKPVVTSNLATAWACLRLCG DDRPQPELGQLMARPYREG >Mature_258_residues TAAIEIISAGRRPRLDDRPLEKRIGLVILATDHTSEVDFRRMVASDRIGVYVSRIHYANPVTPENLLKMRPSLTEGAGLI LPDETLDAVMYSCTSASVVIGDRDIEAAIHLSKPGVPVVTPTAAAVKGLKALGARRISVLTPYTIETSRPVADYFDDLGF MIDRFTCLGLSDDREMARIAPDEIAAFAREALAPQSDALFISCTALRAAQVAARIEAETGKPVVTSNLATAWACLRLCGD DRPQPELGQLMARPYREG
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28078; Mature: 27946
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAIEIISAGRRPRLDDRPLEKRIGLVILATDHTSEVDFRRMVASDRIGVYVSRIHYAN CCCEEEEHHCCCCCCCCCCCHHHHCCEEEEEECCCCHHHHHHHHHCCCHHEEEEEEECCC PVTPENLLKMRPSLTEGAGLILPDETLDAVMYSCTSASVVIGDRDIEAAIHLSKPGVPVV CCCHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEE TPTAAAVKGLKALGARRISVLTPYTIETSRPVADYFDDLGFMIDRFTCLGLSDDREMARI CCHHHHHHHHHHHCCCEEEEECCEEECCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHC APDEIAAFAREALAPQSDALFISCTALRAAQVAARIEAETGKPVVTSNLATAWACLRLCG CHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHC DDRPQPELGQLMARPYREG CCCCCHHHHHHHHCCCCCC >Mature Secondary Structure TAAIEIISAGRRPRLDDRPLEKRIGLVILATDHTSEVDFRRMVASDRIGVYVSRIHYAN CCEEEEHHCCCCCCCCCCCHHHHCCEEEEEECCCCHHHHHHHHHCCCHHEEEEEEECCC PVTPENLLKMRPSLTEGAGLILPDETLDAVMYSCTSASVVIGDRDIEAAIHLSKPGVPVV CCCHHHHHHHCCCCCCCCEEEECCHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCEE TPTAAAVKGLKALGARRISVLTPYTIETSRPVADYFDDLGFMIDRFTCLGLSDDREMARI CCHHHHHHHHHHHCCCEEEEECCEEECCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHC APDEIAAFAREALAPQSDALFISCTALRAAQVAARIEAETGKPVVTSNLATAWACLRLCG CHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHC DDRPQPELGQLMARPYREG CCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA