| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is uxuAc [H]
Identifier: 190894681
GI number: 190894681
Start: 370826
End: 372013
Strand: Reverse
Name: uxuAc [H]
Synonym: RHECIAT_PC0000344
Alternate gene names: 190894681
Gene position: 372013-370826 (Counterclockwise)
Preceding gene: 190894682
Following gene: 190894679
Centisome position: 34.08
GC content: 63.64
Gene sequence:
>1188_bases ATGCGGCAGGGTTGGAGATGGTTCGGGCCGGAGGCGCCGGTGACGCTGGATGAGGTCCGTCAGACGGGAGCGACCAATAT CGTCTCGTCGCTGCATCAGGTGCCGATCGGCAGGGCCTGGACGGAAAAGGAAGTGCGCGAACGCCAATCGCTGATCGAGA CCACGCCTGCCGATCGGTCGCCGCTCGTATGGTCGGTCGTCGAAAGCATTCCGATTCCCGACGCCGTCAAGCGCAAGGGC GGGGAAGCAAAGGCTGAAATCGAGGCGTGGATTGCCAGCCTGGAAGCAGTTGCTGCCTGCGGCATTCCGATCGTCTGCTA TAATTTCATGCCCGTCGTCGACTGGACCCGCACCGACCTCGATTTCGTGACGCCGACAGGTGCGACAGCCATGCGCTTCG ATCACGAACGCTTCGCAGCCTTCGATCTTTTCGTTCTGAAACGTCAGGATGCGGATCGGCAATATTCCGCGGAAGACCGA GAACGGGCGCGTGTCGTCTTCGAGCAGATGTCGCAGGAGGAAGTTGCCGAGATCACCCGCATCATCACCTCGGCTTTGCC CGGCTCAACCACTGAGCCCCTGACCATTCCAGCCTTCCGGGAAAAGCTGGTCGCCTATAGCGGTATCGACGCCGCACGCC TGCGCCGGCATCTGATCGAGTTCCTGGAGGCAGTGACCCCGGTTGCCGAAGCCCGTGGCGTCAAGCTGACGCTGCATCCC GATGATCCGCCGCGTTCGCTGTTCGGTCTTCCCCGCATCGCTTCGACTGCCGATGACTATGCCGCGCTCTTCGATGCAGT GCCGTCGGCGGCGAACGGCATGTGCTACTGCACCGGCAGCCTCGGCGTGCGCGCCGACAACGACCTGCCGGCCATCGCGC GACGCTTCGCCTCGCGCATCCACTTCGCCCATCTGCGTGCCACGACGCGTGAGGGCGATGGCCGGACCTTCCATGAAAGC GCGCATCTCGAAGGCGACGTCGACATGGTCGCGGTTCTCCGGGAACTGGTTGCCGAAGACCGCCGCCGCAGCGCCGAAGA CACGATCGTCTTCCGTTCGGACCATGGTCACCGCATGCTCGACGATCTCGACAAAACAGTCACGCCCGGTTATCCGGCGA TTGGCCGCATGCGCGGCCTTGCCGAACTCCGCGGCATCATGCATGCGCTTGGCGCTCCGCCGACCTGA
Upstream 100 bases:
>100_bases GCCGTCATTCCCGATGTCGACGAGCTGCGCTCGCGTTACCCCAATTATTTCTGCTGACAACAGGACCACCACGAAACGAA AAGCTAGGGAAGGAAGAAGG
Downstream 100 bases:
>100_bases GAATTTTCGGGCAGCAGCGCTTCGGCGAAAATCACCGCGCTCTGGGTATTCAAAGCGTCAGAGCGCACCCCTTCAGAAAA AGGTCCGTGCACATTTTCGC
Product: mannonate dehydratase
Products: NA
Alternate protein names: D-mannonate hydrolase [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MRQGWRWFGPEAPVTLDEVRQTGATNIVSSLHQVPIGRAWTEKEVRERQSLIETTPADRSPLVWSVVESIPIPDAVKRKG GEAKAEIEAWIASLEAVAACGIPIVCYNFMPVVDWTRTDLDFVTPTGATAMRFDHERFAAFDLFVLKRQDADRQYSAEDR ERARVVFEQMSQEEVAEITRIITSALPGSTTEPLTIPAFREKLVAYSGIDAARLRRHLIEFLEAVTPVAEARGVKLTLHP DDPPRSLFGLPRIASTADDYAALFDAVPSAANGMCYCTGSLGVRADNDLPAIARRFASRIHFAHLRATTREGDGRTFHES AHLEGDVDMVAVLRELVAEDRRRSAEDTIVFRSDHGHRMLDDLDKTVTPGYPAIGRMRGLAELRGIMHALGAPPT
Sequences:
>Translated_395_residues MRQGWRWFGPEAPVTLDEVRQTGATNIVSSLHQVPIGRAWTEKEVRERQSLIETTPADRSPLVWSVVESIPIPDAVKRKG GEAKAEIEAWIASLEAVAACGIPIVCYNFMPVVDWTRTDLDFVTPTGATAMRFDHERFAAFDLFVLKRQDADRQYSAEDR ERARVVFEQMSQEEVAEITRIITSALPGSTTEPLTIPAFREKLVAYSGIDAARLRRHLIEFLEAVTPVAEARGVKLTLHP DDPPRSLFGLPRIASTADDYAALFDAVPSAANGMCYCTGSLGVRADNDLPAIARRFASRIHFAHLRATTREGDGRTFHES AHLEGDVDMVAVLRELVAEDRRRSAEDTIVFRSDHGHRMLDDLDKTVTPGYPAIGRMRGLAELRGIMHALGAPPT >Mature_395_residues MRQGWRWFGPEAPVTLDEVRQTGATNIVSSLHQVPIGRAWTEKEVRERQSLIETTPADRSPLVWSVVESIPIPDAVKRKG GEAKAEIEAWIASLEAVAACGIPIVCYNFMPVVDWTRTDLDFVTPTGATAMRFDHERFAAFDLFVLKRQDADRQYSAEDR ERARVVFEQMSQEEVAEITRIITSALPGSTTEPLTIPAFREKLVAYSGIDAARLRRHLIEFLEAVTPVAEARGVKLTLHP DDPPRSLFGLPRIASTADDYAALFDAVPSAANGMCYCTGSLGVRADNDLPAIARRFASRIHFAHLRATTREGDGRTFHES AHLEGDVDMVAVLRELVAEDRRRSAEDTIVFRSDHGHRMLDDLDKTVTPGYPAIGRMRGLAELRGIMHALGAPPT
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1312
COG function: function code G; D-mannonate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannonate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI1790778, Length=393, Percent_Identity=50.1272264631043, Blast_Score=402, Evalue=1e-113,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004628 - InterPro: IPR013022 [H]
Pfam domain/function: PF03786 UxuA [H]
EC number: =4.2.1.8 [H]
Molecular weight: Translated: 43821; Mature: 43821
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQGWRWFGPEAPVTLDEVRQTGATNIVSSLHQVPIGRAWTEKEVRERQSLIETTPADRS CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC PLVWSVVESIPIPDAVKRKGGEAKAEIEAWIASLEAVAACGIPIVCYNFMPVVDWTRTDL CHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCCCCCC DFVTPTGATAMRFDHERFAAFDLFVLKRQDADRQYSAEDRERARVVFEQMSQEEVAEITR CEECCCCCHHHEECHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH IITSALPGSTTEPLTIPAFREKLVAYSGIDAARLRRHLIEFLEAVTPVAEARGVKLTLHP HHHHHCCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC DDPPRSLFGLPRIASTADDYAALFDAVPSAANGMCYCTGSLGVRADNDLPAIARRFASRI CCCCHHHHCCCHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH HFAHLRATTREGDGRTFHESAHLEGDVDMVAVLRELVAEDRRRSAEDTIVFRSDHGHRML HHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH DDLDKTVTPGYPAIGRMRGLAELRGIMHALGAPPT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRQGWRWFGPEAPVTLDEVRQTGATNIVSSLHQVPIGRAWTEKEVRERQSLIETTPADRS CCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCC PLVWSVVESIPIPDAVKRKGGEAKAEIEAWIASLEAVAACGIPIVCYNFMPVVDWTRTDL CHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCCCCCC DFVTPTGATAMRFDHERFAAFDLFVLKRQDADRQYSAEDRERARVVFEQMSQEEVAEITR CEECCCCCHHHEECHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHH IITSALPGSTTEPLTIPAFREKLVAYSGIDAARLRRHLIEFLEAVTPVAEARGVKLTLHP HHHHHCCCCCCCCEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECC DDPPRSLFGLPRIASTADDYAALFDAVPSAANGMCYCTGSLGVRADNDLPAIARRFASRI CCCCHHHHCCCHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH HFAHLRATTREGDGRTFHESAHLEGDVDMVAVLRELVAEDRRRSAEDTIVFRSDHGHRML HHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHH DDLDKTVTPGYPAIGRMRGLAELRGIMHALGAPPT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA