| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894664
Identifier: 190894664
GI number: 190894664
Start: 353444
End: 353740
Strand: Reverse
Name: 190894664
Synonym: RHECIAT_PC0000327
Alternate gene names: NA
Gene position: 353740-353444 (Counterclockwise)
Preceding gene: 190894665
Following gene: 190894663
Centisome position: 32.41
GC content: 60.61
Gene sequence:
>297_bases ATGAGCTTTTCGCTTCCCGATTTTTCATGGATGGCATGGACCTGGCCGACGGCCGCTTTCTTCATCGTCATCATATTGCT GCTGATCGGCATGGGGGTCTGGGAGTATGCCGTGCCGGGCGGCAACCCGCGGATCGGAATCCTGCGCTTCGAGACGACGC GCGGTGACCGGCTTTTCCTTTCGCTGCTCGGCAGCGCCTTTATCCATCTTGCCTGGCTTGGTCTCGCGGGATCAAGCCTC TGGTGGGCTCTCGCCCTCTCCGTCGTCTACGCCGTCGGCGTATTCCGTTACGTGTGA
Upstream 100 bases:
>100_bases TGCTCGCCGCTGCGGGTGTTGTGACCTTGATCCCAGGGGCGCTGGTGATCTGGTTCGTGCGCAATTACATCGCCAAGGGC TTCGCCCTGGGGAGGGTTTG
Downstream 100 bases:
>100_bases GGGAAGCTGATGCAGATGGCCGGGGGTATTTCTGGCCACCTGAGACGTGAAGACTGCAATCGCAAACCCTGGGAGGACAT TATGCGAAGGCATTTATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSFSLPDFSWMAWTWPTAAFFIVIILLLIGMGVWEYAVPGGNPRIGILRFETTRGDRLFLSLLGSAFIHLAWLGLAGSSL WWALALSVVYAVGVFRYV
Sequences:
>Translated_98_residues MSFSLPDFSWMAWTWPTAAFFIVIILLLIGMGVWEYAVPGGNPRIGILRFETTRGDRLFLSLLGSAFIHLAWLGLAGSSL WWALALSVVYAVGVFRYV >Mature_97_residues SFSLPDFSWMAWTWPTAAFFIVIILLLIGMGVWEYAVPGGNPRIGILRFETTRGDRLFLSLLGSAFIHLAWLGLAGSSLW WALALSVVYAVGVFRYV
Specific function: Unknown
COG id: COG5477
COG function: function code S; Predicted small integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10956; Mature: 10825
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSLPDFSWMAWTWPTAAFFIVIILLLIGMGVWEYAVPGGNPRIGILRFETTRGDRLFL CCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEEEECCCCCHHHH SLLGSAFIHLAWLGLAGSSLWWALALSVVYAVGVFRYV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFSLPDFSWMAWTWPTAAFFIVIILLLIGMGVWEYAVPGGNPRIGILRFETTRGDRLFL CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEEEECCCCCHHHH SLLGSAFIHLAWLGLAGSSLWWALALSVVYAVGVFRYV HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA