| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894628
Identifier: 190894628
GI number: 190894628
Start: 313008
End: 314108
Strand: Reverse
Name: 190894628
Synonym: RHECIAT_PC0000291
Alternate gene names: NA
Gene position: 314108-313008 (Counterclockwise)
Preceding gene: 190894629
Following gene: 190894627
Centisome position: 28.78
GC content: 61.58
Gene sequence:
>1101_bases ATGACAAGGCCGCTCGACATCGTCTTCCTCGGCCTTTCGCTTTCCTCGTCCTGGGGAAACGGCCACGCGACGACCTATCG CGCGCTCATCAAAGGCTTGCGGCAGGATGCTCACCGCGTTCTGTTCCTGGAGCGAGATGTTCCCTGGTACGCCAATCACA GGGACCTCGCTTCGCCTGAGTTCTGCGAGCTCGGTTACTATTCCGATCTGAATGCCATGATCGAGCTTTACGGTGAAAGG CTGCGCAAGGCCGACGCCGTTATCGCGGGATCCTATGTACCGGATGGCGTGGCGCTGATCGACAGGCTCGCTGCGTTGGA ACTGAAAAGTCTCTGCTTCTACGACATCGACACGCCGGTGACCTTGGCCAAGCTCGACCGCGGCGATGAGGAATATCTGG CGCTGCGGCAAATACCGCTGTTCGACGCCTACTTCTCCTTCTCAGGAGGAGAGGTGCTGGCGCGATTGGAGCAGAACTAC GGTGCACGGAGCGCCGTTGCCCTCTACTGCTCCGTCGATCAGGAGCGCTACGCAAATACGGGAGAGGCTGCCGCATGGGA TCTTGGCTATCTCGGAACCTACAGCCCGGACCGGCAGCCGACGCTGGAGCATCTCCTTCTGGAGCCGGCGCGCCGTCTGC CGGAGATGCGCTTCGTCATCGCCGGATCGCAATTTCCTGATGAGATCGAGTGGCCGGCCAATGTCGAACGCATCAAGCAT CTGGCGCCAGCCGAACATGCAAGTTTTTACAGCCGGCAGCGATTCACGCTGAACGTTACTCGCCGCGACATGATTGCCGC CGGCTGGTCTCCCAGTGTGCGACTCTTCGAGGCCGCCGCCTGCGGAACGCCGATCATCAGCGACTTCTGGCGCGGCCTCG GCGAGCTATTGCCGGACGGCGAGGCCCTGTTCATAGCGCGCGCGCCGGAAGAGGTTGTGGCGCTGCTGAGGGAACTTCCC GACAGCGACCGCTTGTCGGTCGCGGCTGCCGCCAGGAAAGTGGTGATGAACAGTCATACGGGGGCTGCGCGTGCTCGCGA ATTCGCCCGCGCTCTTTCGCAACTGCCCGCTAATCCAGCTTTGGACCGTATCTCAGCGTAA
Upstream 100 bases:
>100_bases CGCGCCGGCGCGTGCTGGCCGAGCACACATACGACAATCGCGCCGAAACGGTCGATGCGATCTTTCGCGCCCGCCTCGGC GCTCGCGTGGAGGCAGCGGA
Downstream 100 bases:
>100_bases GGAGAGTATCGATGCTTCACGTCAATCATCGCCGGAAAGGAAAGACTGCTCTGGTTGCAGGGGGCGCCGGCTTTGTCGGC TCGCATCTCTGTGATGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTRPLDIVFLGLSLSSSWGNGHATTYRALIKGLRQDAHRVLFLERDVPWYANHRDLASPEFCELGYYSDLNAMIELYGER LRKADAVIAGSYVPDGVALIDRLAALELKSLCFYDIDTPVTLAKLDRGDEEYLALRQIPLFDAYFSFSGGEVLARLEQNY GARSAVALYCSVDQERYANTGEAAAWDLGYLGTYSPDRQPTLEHLLLEPARRLPEMRFVIAGSQFPDEIEWPANVERIKH LAPAEHASFYSRQRFTLNVTRRDMIAAGWSPSVRLFEAAACGTPIISDFWRGLGELLPDGEALFIARAPEEVVALLRELP DSDRLSVAAAARKVVMNSHTGAARAREFARALSQLPANPALDRISA
Sequences:
>Translated_366_residues MTRPLDIVFLGLSLSSSWGNGHATTYRALIKGLRQDAHRVLFLERDVPWYANHRDLASPEFCELGYYSDLNAMIELYGER LRKADAVIAGSYVPDGVALIDRLAALELKSLCFYDIDTPVTLAKLDRGDEEYLALRQIPLFDAYFSFSGGEVLARLEQNY GARSAVALYCSVDQERYANTGEAAAWDLGYLGTYSPDRQPTLEHLLLEPARRLPEMRFVIAGSQFPDEIEWPANVERIKH LAPAEHASFYSRQRFTLNVTRRDMIAAGWSPSVRLFEAAACGTPIISDFWRGLGELLPDGEALFIARAPEEVVALLRELP DSDRLSVAAAARKVVMNSHTGAARAREFARALSQLPANPALDRISA >Mature_365_residues TRPLDIVFLGLSLSSSWGNGHATTYRALIKGLRQDAHRVLFLERDVPWYANHRDLASPEFCELGYYSDLNAMIELYGERL RKADAVIAGSYVPDGVALIDRLAALELKSLCFYDIDTPVTLAKLDRGDEEYLALRQIPLFDAYFSFSGGEVLARLEQNYG ARSAVALYCSVDQERYANTGEAAAWDLGYLGTYSPDRQPTLEHLLLEPARRLPEMRFVIAGSQFPDEIEWPANVERIKHL APAEHASFYSRQRFTLNVTRRDMIAAGWSPSVRLFEAAACGTPIISDFWRGLGELLPDGEALFIARAPEEVVALLRELPD SDRLSVAAAARKVVMNSHTGAARAREFARALSQLPANPALDRISA
Specific function: Unknown
COG id: COG4641
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40753; Mature: 40621
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPLDIVFLGLSLSSSWGNGHATTYRALIKGLRQDAHRVLFLERDVPWYANHRDLASPE CCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC FCELGYYSDLNAMIELYGERLRKADAVIAGSYVPDGVALIDRLAALELKSLCFYDIDTPV HHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCE TLAKLDRGDEEYLALRQIPLFDAYFSFSGGEVLARLEQNYGARSAVALYCSVDQERYANT EEECCCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHCCCC GEAAAWDLGYLGTYSPDRQPTLEHLLLEPARRLPEMRFVIAGSQFPDEIEWPANVERIKH CCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHH LAPAEHASFYSRQRFTLNVTRRDMIAAGWSPSVRLFEAAACGTPIISDFWRGLGELLPDG HCCHHHHHHHHCCEEEEEECHHHHEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCC EALFIARAPEEVVALLRELPDSDRLSVAAAARKVVMNSHTGAARAREFARALSQLPANPA CEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC LDRISA HHHCCC >Mature Secondary Structure TRPLDIVFLGLSLSSSWGNGHATTYRALIKGLRQDAHRVLFLERDVPWYANHRDLASPE CCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC FCELGYYSDLNAMIELYGERLRKADAVIAGSYVPDGVALIDRLAALELKSLCFYDIDTPV HHCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHEEECCCCE TLAKLDRGDEEYLALRQIPLFDAYFSFSGGEVLARLEQNYGARSAVALYCSVDQERYANT EEECCCCCCHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEEECCHHHCCCC GEAAAWDLGYLGTYSPDRQPTLEHLLLEPARRLPEMRFVIAGSQFPDEIEWPANVERIKH CCCCEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHH LAPAEHASFYSRQRFTLNVTRRDMIAAGWSPSVRLFEAAACGTPIISDFWRGLGELLPDG HCCHHHHHHHHCCEEEEEECHHHHEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCC EALFIARAPEEVVALLRELPDSDRLSVAAAARKVVMNSHTGAARAREFARALSQLPANPA CEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC LDRISA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA