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The map label for this gene is spsC [H]

Identifier: 190894598

GI number: 190894598

Start: 277657

End: 278874

Strand: Reverse

Name: spsC [H]

Synonym: RHECIAT_PC0000261

Alternate gene names: 190894598

Gene position: 278874-277657 (Counterclockwise)

Preceding gene: 190894599

Following gene: 190894595

Centisome position: 25.55

GC content: 61.49

Gene sequence:

>1218_bases
ATGAGCACGTCATTATCGACAATCCCTGTCGCCAAACCCGTCCTCGGAGAGGAAGAGGCAGAGGCCGCCCGCCGCGTTAT
TCTATCTGGATGGGTAACCCAGGGGCCCGAAGTCGCCGCTTTCGAGCGTGAATTCGCCGCCTATGTCGGCGCGGCCCACG
CCTGCGCCGTCTCCAACTGCACGACCGCGTTGCATTTGGCCCTCATGGCGGTCGGCATCGGTGCCGGCGACGAGGTCATC
ACGGTCAGCCACTCGTTTATCGCAACCGCGAACGCCATCCGCTATTGCCATGCGGTGCCCGTCTTTGTCGACATCGAGGC
CGACGGCTACAATATCGATCCCAGCCTGATCGAAGCAGCCATTACCTCCCGCACAAAGGCAATCCTGTGTGTGCATCAGC
TGGGAATGCCGTGTGACCTCGGACCGATCGTCGAGATCGGCAAGCGCCACGGGGTCCCTGTTATCGAAGATGCGGCCTGC
GCGACGGGAAGCGAAATCCTGTGGGATGGCCGCTGGGAAAAAATCGGCAAGCCGCACGCCGACATTGCCTGCTTCTCTTT
CCACCCGAGAAAGGTGGTCACCACAGGCGATGGCGGCATGTTGACCACGGCCAATGCCGAATATGACCGGAAATTCCGGC
TGTGGCGCCAGCATGGCATGAGTGTCACCGATGCGGTCCGCCACGGCTCGAAGCAGGTGATTTTCGAGGATTATGACGAG
CTGGGCTACAATTACCGGATGACCGACCTTCAGGCCGCCGTTGGACGCGAGCAATTGCGGCGGCTGCCGGAATTGGTCGC
CCAGCGCCGGCTGATTGCCGAGCAATATTGCGAACGTCTGTCGACAATTACAGGGCTTTCTTCGCCGGCCGAGCCACGCT
GGGCTCGAAGCAACTGGCAGAGCTTCTGCGTGAGATTGCCCGATACGGTCGACCAGCGGGCCATCATGCAGAGCCTGCTC
GACCAGGGCATCTCGACCCGGCGCGGTGTGATGAACATTCACCTGGAGGGAGCCTATTCCGGTGAGCGCTCCCACCGCGT
TGCCACGAGCCTGATGCGAAGCATATCTGCGCAGCAGCAAACGATCATCCTGCCGCTTTATGCCCAGATGACCGTGTCTG
ACGTGGACCGGGTTGTTGAGGCCCTTCGCGCCGCCATTGCGCAGGCGTCTGTCGGAGCCATAAGCGCGCAACGTACCATG
GACGTCGCTGTCGCCTGA

Upstream 100 bases:

>100_bases
AACTTCTGGGTTTCAAGGCCGAAATCTCGATGGAGCAGGGGCTTCGTGACCTTGTCGAGTGGTGGCAGTCAAAGACTGCT
GCAGCCGGAGGTCAAGCCGC

Downstream 100 bases:

>100_bases
TCCCGCAATTTAATCAGCATAACGAACAATGCGCGCATCGCCGGATGCGCGCATTGTTCGTTATGCTGATTTCGTGATCC
ATCCGCGGATGATCGCTGGA

Product: putative aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MSTSLSTIPVAKPVLGEEEAEAARRVILSGWVTQGPEVAAFEREFAAYVGAAHACAVSNCTTALHLALMAVGIGAGDEVI
TVSHSFIATANAIRYCHAVPVFVDIEADGYNIDPSLIEAAITSRTKAILCVHQLGMPCDLGPIVEIGKRHGVPVIEDAAC
ATGSEILWDGRWEKIGKPHADIACFSFHPRKVVTTGDGGMLTTANAEYDRKFRLWRQHGMSVTDAVRHGSKQVIFEDYDE
LGYNYRMTDLQAAVGREQLRRLPELVAQRRLIAEQYCERLSTITGLSSPAEPRWARSNWQSFCVRLPDTVDQRAIMQSLL
DQGISTRRGVMNIHLEGAYSGERSHRVATSLMRSISAQQQTIILPLYAQMTVSDVDRVVEALRAAIAQASVGAISAQRTM
DVAVA

Sequences:

>Translated_405_residues
MSTSLSTIPVAKPVLGEEEAEAARRVILSGWVTQGPEVAAFEREFAAYVGAAHACAVSNCTTALHLALMAVGIGAGDEVI
TVSHSFIATANAIRYCHAVPVFVDIEADGYNIDPSLIEAAITSRTKAILCVHQLGMPCDLGPIVEIGKRHGVPVIEDAAC
ATGSEILWDGRWEKIGKPHADIACFSFHPRKVVTTGDGGMLTTANAEYDRKFRLWRQHGMSVTDAVRHGSKQVIFEDYDE
LGYNYRMTDLQAAVGREQLRRLPELVAQRRLIAEQYCERLSTITGLSSPAEPRWARSNWQSFCVRLPDTVDQRAIMQSLL
DQGISTRRGVMNIHLEGAYSGERSHRVATSLMRSISAQQQTIILPLYAQMTVSDVDRVVEALRAAIAQASVGAISAQRTM
DVAVA
>Mature_404_residues
STSLSTIPVAKPVLGEEEAEAARRVILSGWVTQGPEVAAFEREFAAYVGAAHACAVSNCTTALHLALMAVGIGAGDEVIT
VSHSFIATANAIRYCHAVPVFVDIEADGYNIDPSLIEAAITSRTKAILCVHQLGMPCDLGPIVEIGKRHGVPVIEDAACA
TGSEILWDGRWEKIGKPHADIACFSFHPRKVVTTGDGGMLTTANAEYDRKFRLWRQHGMSVTDAVRHGSKQVIFEDYDEL
GYNYRMTDLQAAVGREQLRRLPELVAQRRLIAEQYCERLSTITGLSSPAEPRWARSNWQSFCVRLPDTVDQRAIMQSLLD
QGISTRRGVMNIHLEGAYSGERSHRVATSLMRSISAQQQTIILPLYAQMTVSDVDRVVEALRAAIAQASVGAISAQRTMD
VAVA

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=388, Percent_Identity=36.8556701030928, Blast_Score=218, Evalue=6e-58,
Organism=Escherichia coli, GI2367285, Length=339, Percent_Identity=29.7935103244838, Blast_Score=134, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44146; Mature: 44015

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSLSTIPVAKPVLGEEEAEAARRVILSGWVTQGPEVAAFEREFAAYVGAAHACAVSNC
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TTALHLALMAVGIGAGDEVITVSHSFIATANAIRYCHAVPVFVDIEADGYNIDPSLIEAA
HHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHEECEEEEEEECCCCCCCHHHHHHH
ITSRTKAILCVHQLGMPCDLGPIVEIGKRHGVPVIEDAACATGSEILWDGRWEKIGKPHA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHCCCCCC
DIACFSFHPRKVVTTGDGGMLTTANAEYDRKFRLWRQHGMSVTDAVRHGSKQVIFEDYDE
CEEEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHH
LGYNYRMTDLQAAVGREQLRRLPELVAQRRLIAEQYCERLSTITGLSSPAEPRWARSNWQ
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHH
SFCVRLPDTVDQRAIMQSLLDQGISTRRGVMNIHLEGAYSGERSHRVATSLMRSISAQQQ
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
TIILPLYAQMTVSDVDRVVEALRAAIAQASVGAISAQRTMDVAVA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC
>Mature Secondary Structure 
STSLSTIPVAKPVLGEEEAEAARRVILSGWVTQGPEVAAFEREFAAYVGAAHACAVSNC
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
TTALHLALMAVGIGAGDEVITVSHSFIATANAIRYCHAVPVFVDIEADGYNIDPSLIEAA
HHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHEECEEEEEEECCCCCCCHHHHHHH
ITSRTKAILCVHQLGMPCDLGPIVEIGKRHGVPVIEDAACATGSEILWDGRWEKIGKPHA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCHHHCCCCCC
DIACFSFHPRKVVTTGDGGMLTTANAEYDRKFRLWRQHGMSVTDAVRHGSKQVIFEDYDE
CEEEEEECCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHCCCCEEEEHHHHH
LGYNYRMTDLQAAVGREQLRRLPELVAQRRLIAEQYCERLSTITGLSSPAEPRWARSNWQ
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCHH
SFCVRLPDTVDQRAIMQSLLDQGISTRRGVMNIHLEGAYSGERSHRVATSLMRSISAQQQ
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
TIILPLYAQMTVSDVDRVVEALRAAIAQASVGAISAQRTMDVAVA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]