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The map label for this gene is 190894495

Identifier: 190894495

GI number: 190894495

Start: 152506

End: 152964

Strand: Reverse

Name: 190894495

Synonym: RHECIAT_PC0000157

Alternate gene names: NA

Gene position: 152964-152506 (Counterclockwise)

Preceding gene: 190894500

Following gene: 190894488

Centisome position: 14.01

GC content: 59.26

Gene sequence:

>459_bases
ATGAACGTCAAGACACCAAATGCCATAGACAGCTATGTCGGAGCGCGCATCAGGACGCGCCGGCAGTTGCTCGGAATGAG
CCAGGAGCGGCTTGCCGAGCAGATCGGCGTGACCTTTCAGCAAGTTCAAAAATACGAGAAGGGCATCAACCGCATCGGCG
CAAGTCGTTTGCAGCGGATCGCCGAAGTGCTTCACACCTCACCGAGCTTCTTTTTCGAGCAGGGCGACTCCGAGCCGGTG
GCAGCGCCAGGGCTAGGTGGACGGGACCGCACCGATCCGGTCGCTGAATTCCTGCAGACCAAAGAGGGACTGGTCCTCAA
TCGGGCTTTTCTGAAGATCGCCGATCCCCATATCCGTGCATCGATCATCGCACTGGTGACGGCGATGGGGCAGGCGGAAA
GCCGTGGTCTGACAATCTCGGCCTCCACTACGGACATCTCCCATCCGCTTGGGGAGTAA

Upstream 100 bases:

>100_bases
TCGTATATGCGGTAGGCTATACGAAAAGAACCGTGGAAAACGGTTCAGAGGGGCACTACAGCTGCGCCGATTGAAATGCG
ATCGAGGCTGAAAATACCCA

Downstream 100 bases:

>100_bases
CCGGACAGACCGACAATTTGCGTGTGCCTTCGCATCATATCGAGCGCTTGGAACAGAATTGCCGAGATTGCAGGATTAAC
CACTCGCCGGCGAGGCGTTC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNVKTPNAIDSYVGARIRTRRQLLGMSQERLAEQIGVTFQQVQKYEKGINRIGASRLQRIAEVLHTSPSFFFEQGDSEPV
AAPGLGGRDRTDPVAEFLQTKEGLVLNRAFLKIADPHIRASIIALVTAMGQAESRGLTISASTTDISHPLGE

Sequences:

>Translated_152_residues
MNVKTPNAIDSYVGARIRTRRQLLGMSQERLAEQIGVTFQQVQKYEKGINRIGASRLQRIAEVLHTSPSFFFEQGDSEPV
AAPGLGGRDRTDPVAEFLQTKEGLVLNRAFLKIADPHIRASIIALVTAMGQAESRGLTISASTTDISHPLGE
>Mature_152_residues
MNVKTPNAIDSYVGARIRTRRQLLGMSQERLAEQIGVTFQQVQKYEKGINRIGASRLQRIAEVLHTSPSFFFEQGDSEPV
AAPGLGGRDRTDPVAEFLQTKEGLVLNRAFLKIADPHIRASIIALVTAMGQAESRGLTISASTTDISHPLGE

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 16601; Mature: 16601

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKTPNAIDSYVGARIRTRRQLLGMSQERLAEQIGVTFQQVQKYEKGINRIGASRLQRI
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
AEVLHTSPSFFFEQGDSEPVAAPGLGGRDRTDPVAEFLQTKEGLVLNRAFLKIADPHIRA
HHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHH
SIIALVTAMGQAESRGLTISASTTDISHPLGE
HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MNVKTPNAIDSYVGARIRTRRQLLGMSQERLAEQIGVTFQQVQKYEKGINRIGASRLQRI
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
AEVLHTSPSFFFEQGDSEPVAAPGLGGRDRTDPVAEFLQTKEGLVLNRAFLKIADPHIRA
HHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHH
SIIALVTAMGQAESRGLTISASTTDISHPLGE
HHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]