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The map label for this gene is azlC [H]

Identifier: 190894461

GI number: 190894461

Start: 121071

End: 121805

Strand: Reverse

Name: azlC [H]

Synonym: RHECIAT_PC0000123

Alternate gene names: 190894461

Gene position: 121805-121071 (Counterclockwise)

Preceding gene: 190894462

Following gene: 190894460

Centisome position: 11.16

GC content: 63.4

Gene sequence:

>735_bases
ATGACCTCGGCATCAAGCGGAGGTTTGAACGTGCACAACAATGAAATCTGGGCGGAGTTTTCAGGCGGAATGCGGGCGAT
CGCGCCACTCGTTGCCGCCGTCATTCCGATTGGGCTTGTCTTCGGCGCCGTCGCCGCAACGAAGGGGCTCTCGCCGCTGG
AAACCGGGCTGATGAGCGCGCTCGTCTTTGCCGGCGGTTCGCAATTCGTGGCGATGGATATCTGGACGCATCCCGCCTCC
TGGACGAGCCTCGGTTTCGCAGCCCTTCTCGTCAATATCCGCCACGTTTTGATGGGAGCATCGATCGTCACAAAGATGCA
GGCGTTTTCACCGCGCGCCCGTTATCTCTCGGTGCTTTTTCTGGCCGACGAAATCTGGGCAATGGCGGAATTCCGCGCCG
GTGTGGCGAGGCTGAAGGCGGCATGGTTTGCCGGGCTGGCAGCGCCCTTCTATCTGGCATGGGTTCTTTCCGGGCTGGCG
GGCGCCACGCTCGGCGCTTTTCTCGGCGATCCCGCAGCGCTTGGGCTGGATTTTGCCTTTCCGGCCGCTTTCATCGTGCT
CGTCATGGGATTCTGGAAAGGACGAGAGACTGGCGCCATTCTGCTTGCGAGCGCGGCAGCGGCCGTGCTGACCCACCACT
TCGTACCCGGCGTCTGGTACGTCGCGGCCGGCGCTCTCGCCGGTGTCGCGGCCGCGACCTTCAGCGCTATGCGCCGCCTG
GAGGTGACGCCATGA

Upstream 100 bases:

>100_bases
GCATTTCACCAGGCACTTCAAGGCCCGTACCGGATTAACGCCCGGCCAGTATCGGGCGCGGTAATCACTTTCGTTCAAGA
CGTCTGTTCGGCACGGCTCT

Downstream 100 bases:

>100_bases
CGTTCGACCTGCAGACCCTGCTCGCCATTCTGGCCATGGCGGCTGCGACGATCCTGACGCGTGTCAGCGGGCTCTTTCTG
CTGCGGTATGTGTCGCTGGA

Product: putative branched-chain amino acid transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTSASSGGLNVHNNEIWAEFSGGMRAIAPLVAAVIPIGLVFGAVAATKGLSPLETGLMSALVFAGGSQFVAMDIWTHPAS
WTSLGFAALLVNIRHVLMGASIVTKMQAFSPRARYLSVLFLADEIWAMAEFRAGVARLKAAWFAGLAAPFYLAWVLSGLA
GATLGAFLGDPAALGLDFAFPAAFIVLVMGFWKGRETGAILLASAAAAVLTHHFVPGVWYVAAGALAGVAAATFSAMRRL
EVTP

Sequences:

>Translated_244_residues
MTSASSGGLNVHNNEIWAEFSGGMRAIAPLVAAVIPIGLVFGAVAATKGLSPLETGLMSALVFAGGSQFVAMDIWTHPAS
WTSLGFAALLVNIRHVLMGASIVTKMQAFSPRARYLSVLFLADEIWAMAEFRAGVARLKAAWFAGLAAPFYLAWVLSGLA
GATLGAFLGDPAALGLDFAFPAAFIVLVMGFWKGRETGAILLASAAAAVLTHHFVPGVWYVAAGALAGVAAATFSAMRRL
EVTP
>Mature_243_residues
TSASSGGLNVHNNEIWAEFSGGMRAIAPLVAAVIPIGLVFGAVAATKGLSPLETGLMSALVFAGGSQFVAMDIWTHPASW
TSLGFAALLVNIRHVLMGASIVTKMQAFSPRARYLSVLFLADEIWAMAEFRAGVARLKAAWFAGLAAPFYLAWVLSGLAG
ATLGAFLGDPAALGLDFAFPAAFIVLVMGFWKGRETGAILLASAAAAVLTHHFVPGVWYVAAGALAGVAAATFSAMRRLE
VTP

Specific function: Involved in branched-chain amino acid transport [H]

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=189, Percent_Identity=32.2751322751323, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25297; Mature: 25166

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSASSGGLNVHNNEIWAEFSGGMRAIAPLVAAVIPIGLVFGAVAATKGLSPLETGLMSA
CCCCCCCCCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LVFAGGSQFVAMDIWTHPASWTSLGFAALLVNIRHVLMGASIVTKMQAFSPRARYLSVLF
HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LADEIWAMAEFRAGVARLKAAWFAGLAAPFYLAWVLSGLAGATLGAFLGDPAALGLDFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
PAAFIVLVMGFWKGRETGAILLASAAAAVLTHHFVPGVWYVAAGALAGVAAATFSAMRRL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EVTP
CCCC
>Mature Secondary Structure 
TSASSGGLNVHNNEIWAEFSGGMRAIAPLVAAVIPIGLVFGAVAATKGLSPLETGLMSA
CCCCCCCCEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LVFAGGSQFVAMDIWTHPASWTSLGFAALLVNIRHVLMGASIVTKMQAFSPRARYLSVLF
HHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LADEIWAMAEFRAGVARLKAAWFAGLAAPFYLAWVLSGLAGATLGAFLGDPAALGLDFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH
PAAFIVLVMGFWKGRETGAILLASAAAAVLTHHFVPGVWYVAAGALAGVAAATFSAMRRL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EVTP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9287000; 9308178; 9384377 [H]