| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894460
Identifier: 190894460
GI number: 190894460
Start: 120769
End: 121074
Strand: Reverse
Name: 190894460
Synonym: RHECIAT_PC0000122
Alternate gene names: NA
Gene position: 121074-120769 (Counterclockwise)
Preceding gene: 190894461
Following gene: 190894452
Centisome position: 11.09
GC content: 66.01
Gene sequence:
>306_bases ATGACGTTCGACCTGCAGACCCTGCTCGCCATTCTGGCCATGGCGGCTGCGACGATCCTGACGCGTGTCAGCGGGCTCTT TCTGCTGCGGTATGTGTCGCTGGACGGCAGCAGGCGCAAGGCGATCGAATCCATACCGCCCGCCGTGCTCATGGCCGTGG TGGCGCCGACCGCTTTTGCGACAGGTATCGCAGAGAGCGCCGCCTGTGCGGTTACCGCACTAGCTGCCCTGCGTTTGCCG ATGCTGGTCGCTGTCGCCACTGGCGTCGTCTGCGTGGCGCTGCTCAGGGCGATCGGCTTCGGCTGA
Upstream 100 bases:
>100_bases CCCACCACTTCGTACCCGGCGTCTGGTACGTCGCGGCCGGCGCTCTCGCCGGTGTCGCGGCCGCGACCTTCAGCGCTATG CGCCGCCTGGAGGTGACGCC
Downstream 100 bases:
>100_bases GCCGATGCCGCCGCATCTGGCTACTCCTTCACCGCACCCGTCATCGAGGACACGTAATAATCCACGAAGAAGGAATAGAG GATGACGACCGGCAGCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTFDLQTLLAILAMAAATILTRVSGLFLLRYVSLDGSRRKAIESIPPAVLMAVVAPTAFATGIAESAACAVTALAALRLP MLVAVATGVVCVALLRAIGFG
Sequences:
>Translated_101_residues MTFDLQTLLAILAMAAATILTRVSGLFLLRYVSLDGSRRKAIESIPPAVLMAVVAPTAFATGIAESAACAVTALAALRLP MLVAVATGVVCVALLRAIGFG >Mature_100_residues TFDLQTLLAILAMAAATILTRVSGLFLLRYVSLDGSRRKAIESIPPAVLMAVVAPTAFATGIAESAACAVTALAALRLPM LVAVATGVVCVALLRAIGFG
Specific function: Unknown
COG id: COG4541
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10302; Mature: 10170
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDLQTLLAILAMAAATILTRVSGLFLLRYVSLDGSRRKAIESIPPAVLMAVVAPTAFA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH TGIAESAACAVTALAALRLPMLVAVATGVVCVALLRAIGFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TFDLQTLLAILAMAAATILTRVSGLFLLRYVSLDGSRRKAIESIPPAVLMAVVAPTAFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH TGIAESAACAVTALAALRLPMLVAVATGVVCVALLRAIGFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA