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The map label for this gene is ycaK [C]

Identifier: 190894432

GI number: 190894432

Start: 89444

End: 90025

Strand: Reverse

Name: ycaK [C]

Synonym: RHECIAT_PC0000094

Alternate gene names: 190894432

Gene position: 90025-89444 (Counterclockwise)

Preceding gene: 190894433

Following gene: 190894429

Centisome position: 8.25

GC content: 57.9

Gene sequence:

>582_bases
ATGAGAGTTGTCGTCCTTCACTCGCATCCGGTCGAGGAAAGCTACGGCAAGGCGCTTTACAAACAAACGCTGGAAAGCCT
TCGCAAAGCCGGTCACGAGGTGGATGCCTGCGATCTCTATGCCGAGGAATTCGATCCCGTTCTCTCACGCCACGACCGGC
TCGCCTATCACCACTATCCCGGCAATACCGCGCTGGTGAAGCCCTATGTCGATCGGCTGAAACAGGCCGAAGGGCTGGTG
CTGGTGACGCCTGTCTGGAATTTTGGGTTCCCGGCAATCCTCAAAGGCTATTTCGATCGCGTCTGGCTCCCGGGCGTCTC
TTTTGAACTTGTCGACGGCAAGGTGGAATCTAGGCTACGCCATATCACGAAGCTCGCCGCCGTACTGACCTACGGAGCAA
CCCCATTCCGCGCCTTCGTGGCCGGTAATCCACCGAAGAGGATCGTCAAGCGCGTGCTGCGAGCGCAGATCAATCCACTG
CGGCCGGTCACCTTCCTTGCCCATTACGACATGAACAATTGCACGCCTGAAACGCGGGCCCGGTTTCTGGAAAAGGTGCA
GATGGCGATGGAACGGTTCTGA

Upstream 100 bases:

>100_bases
TGAACCCCGGCAAGATGATCGCCTGGGAGAACCCGGATTTCGATTTCGATGCCGGCAAGAACTATCTCTTCCCAGGACTT
GCGAGCGTCATGGAGGCCTC

Downstream 100 bases:

>100_bases
AACGCGTCATCACAATATTTTGGCGGCGGTGACCTCGACTTCGACGAGGAATTCCGGCCGGGTGAACCCGCCGACGATGA
TCAACGTCGAAACCGGCTTC

Product: putative NAD(P)H dehydrogenase

Products: NA

Alternate protein names: NADPH-Quinone Reductase; NAD(P)H Dehydrogenase Protein; NAD(P)H Oxidoreductase; NAD(P)H Dehydrogenase Quinone Family; Oxidoreductase; Flavodoxin; Quinone Family NAD(P)H Dehydrogenase; Ribosyldihydronicotinamide Dehydrogenase; Oxidoreductase Protein; NADPH-Q Uinone Reductase; Flavodoxin-Like Fold Family Protein; Flavodoxin Containing Oxidoreductase; NAD(P)H Dehydrogenase Quinone Family Protein; Quinone Dependent NADH Dehydrogenase; NAD(P)H Oxidoreductase YcaK; Quinone Dependent NAD(P)H Dehydrogenase; Flavodoxin-Like Fold Subfamily; Flavodoxin-Like Fold Domain Protein; NADPH-Quinone Reductase YabF Family

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRVVVLHSHPVEESYGKALYKQTLESLRKAGHEVDACDLYAEEFDPVLSRHDRLAYHHYPGNTALVKPYVDRLKQAEGLV
LVTPVWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLRHITKLAAVLTYGATPFRAFVAGNPPKRIVKRVLRAQINPL
RPVTFLAHYDMNNCTPETRARFLEKVQMAMERF

Sequences:

>Translated_193_residues
MRVVVLHSHPVEESYGKALYKQTLESLRKAGHEVDACDLYAEEFDPVLSRHDRLAYHHYPGNTALVKPYVDRLKQAEGLV
LVTPVWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLRHITKLAAVLTYGATPFRAFVAGNPPKRIVKRVLRAQINPL
RPVTFLAHYDMNNCTPETRARFLEKVQMAMERF
>Mature_193_residues
MRVVVLHSHPVEESYGKALYKQTLESLRKAGHEVDACDLYAEEFDPVLSRHDRLAYHHYPGNTALVKPYVDRLKQAEGLV
LVTPVWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLRHITKLAAVLTYGATPFRAFVAGNPPKRIVKRVLRAQINPL
RPVTFLAHYDMNNCTPETRARFLEKVQMAMERF

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.99.- [C]

Molecular weight: Translated: 22120; Mature: 22120

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVVLHSHPVEESYGKALYKQTLESLRKAGHEVDACDLYAEEFDPVLSRHDRLAYHHYP
CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
GNTALVKPYVDRLKQAEGLVLVTPVWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLR
CCCEEEHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
HITKLAAVLTYGATPFRAFVAGNPPKRIVKRVLRAQINPLRPVTFLAHYDMNNCTPETRA
HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCHHHHH
RFLEKVQMAMERF
HHHHHHHHHHHCC
>Mature Secondary Structure
MRVVVLHSHPVEESYGKALYKQTLESLRKAGHEVDACDLYAEEFDPVLSRHDRLAYHHYP
CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECC
GNTALVKPYVDRLKQAEGLVLVTPVWNFGFPAILKGYFDRVWLPGVSFELVDGKVESRLR
CCCEEEHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHHHH
HITKLAAVLTYGATPFRAFVAGNPPKRIVKRVLRAQINPLRPVTFLAHYDMNNCTPETRA
HHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCHHHHH
RFLEKVQMAMERF
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA