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The map label for this gene is rpe [H]

Identifier: 190571232

GI number: 190571232

Start: 909651

End: 910325

Strand: Reverse

Name: rpe [H]

Synonym: WPa_0832

Alternate gene names: 190571232

Gene position: 910325-909651 (Counterclockwise)

Preceding gene: 190571233

Following gene: 190571228

Centisome position: 61.41

GC content: 33.33

Gene sequence:

>675_bases
ATGGGTATTAAAATTGCACCTTCTATACTTTCAGCAGACTTTGCAAAATTAGGGGAGGAAGTAAAAAGAATTAGCGACTT
GAATGTAGATTATATACACATAGACGTTATGGATGGAAATTTTGTTCCAAATATTACAATAGGTCCGAATGTTATCTATG
CGATACGTAAATATAGCAACCTTCCTTTTGATGTGCACTTAATGATTAAATCTCCTGGTGACCATATTGAAAGTTTTATA
AATGCTGGTGCTGATATTATCACTATACATGCAGAAGCAGAGATACATCTTGAGAGGCTAGTAAGAAAGATAAAATCATA
TAAAAACAATACAAAAAAAATAATACAAGTTGGAGCTTCAATTGTTCCTTCAACTTCTCCAAGCGTGCTTGAGTATATAA
TAGATGAGCTAGATATTGTGCTAATTATGACAGTCAATCCTGGATTTGGAGGACAGGAGTTTATTCATTCGCAGTTGAGT
AAGATATCTACTGTGAGGAAAATGATACAGGACCGTAATCTTAAAACACAAGTTTCAGTAGATGGTGGAGTTAACTTTTC
TAACGCAGCTGATATAATAAAAGCAGGTGCAAATATATTAGTTGCTGGATCAGCAATATTTAAAGCTGAAGACATGAAAA
AGGCTGTAAACGATCTTAAAAATCTTTCGTTATAA

Upstream 100 bases:

>100_bases
CTGGAAGTATACAAAAATTTCTAAATGAGATTAATATAGTATTGGGATGACAGAGTTTAAAAAATAAGTTACTTTTTTTA
TTTTTGGTAAAAAGTATTCT

Downstream 100 bases:

>100_bases
CCCTACAGATAACACAAACCATTTTTGTTATCTTGTCAGTTTTAAAAATTCCTATTATCCCAGTGTTTCGACACTGAGAT
AATAGAAAGTAAGTTCAACC

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MGIKIAPSILSADFAKLGEEVKRISDLNVDYIHIDVMDGNFVPNITIGPNVIYAIRKYSNLPFDVHLMIKSPGDHIESFI
NAGADIITIHAEAEIHLERLVRKIKSYKNNTKKIIQVGASIVPSTSPSVLEYIIDELDIVLIMTVNPGFGGQEFIHSQLS
KISTVRKMIQDRNLKTQVSVDGGVNFSNAADIIKAGANILVAGSAIFKAEDMKKAVNDLKNLSL

Sequences:

>Translated_224_residues
MGIKIAPSILSADFAKLGEEVKRISDLNVDYIHIDVMDGNFVPNITIGPNVIYAIRKYSNLPFDVHLMIKSPGDHIESFI
NAGADIITIHAEAEIHLERLVRKIKSYKNNTKKIIQVGASIVPSTSPSVLEYIIDELDIVLIMTVNPGFGGQEFIHSQLS
KISTVRKMIQDRNLKTQVSVDGGVNFSNAADIIKAGANILVAGSAIFKAEDMKKAVNDLKNLSL
>Mature_223_residues
GIKIAPSILSADFAKLGEEVKRISDLNVDYIHIDVMDGNFVPNITIGPNVIYAIRKYSNLPFDVHLMIKSPGDHIESFIN
AGADIITIHAEAEIHLERLVRKIKSYKNNTKKIIQVGASIVPSTSPSVLEYIIDELDIVLIMTVNPGFGGQEFIHSQLSK
ISTVRKMIQDRNLKTQVSVDGGVNFSNAADIIKAGANILVAGSAIFKAEDMKKAVNDLKNLSL

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=224, Percent_Identity=39.2857142857143, Blast_Score=161, Evalue=4e-40,
Organism=Homo sapiens, GI219879828, Length=224, Percent_Identity=37.0535714285714, Blast_Score=149, Evalue=2e-36,
Organism=Homo sapiens, GI24307923, Length=171, Percent_Identity=30.9941520467836, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI1789788, Length=218, Percent_Identity=45.4128440366972, Blast_Score=191, Evalue=2e-50,
Organism=Escherichia coli, GI1790523, Length=204, Percent_Identity=34.8039215686275, Blast_Score=147, Evalue=6e-37,
Organism=Escherichia coli, GI1790754, Length=222, Percent_Identity=28.3783783783784, Blast_Score=91, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17552948, Length=225, Percent_Identity=40.8888888888889, Blast_Score=156, Evalue=7e-39,
Organism=Saccharomyces cerevisiae, GI6322341, Length=230, Percent_Identity=38.2608695652174, Blast_Score=161, Evalue=6e-41,
Organism=Drosophila melanogaster, GI24586301, Length=220, Percent_Identity=35, Blast_Score=146, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24511; Mature: 24380

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIKIAPSILSADFAKLGEEVKRISDLNVDYIHIDVMDGNFVPNITIGPNVIYAIRKYSN
CCCEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCHHHEEEHHHCC
LPFDVHLMIKSPGDHIESFINAGADIITIHAEAEIHLERLVRKIKSYKNNTKKIIQVGAS
CCEEEEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCH
IVPSTSPSVLEYIIDELDIVLIMTVNPGFGGQEFIHSQLSKISTVRKMIQDRNLKTQVSV
HCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DGGVNFSNAADIIKAGANILVAGSAIFKAEDMKKAVNDLKNLSL
CCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GIKIAPSILSADFAKLGEEVKRISDLNVDYIHIDVMDGNFVPNITIGPNVIYAIRKYSN
CCEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCHHHEEEHHHCC
LPFDVHLMIKSPGDHIESFINAGADIITIHAEAEIHLERLVRKIKSYKNNTKKIIQVGAS
CCEEEEEEEECCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCH
IVPSTSPSVLEYIIDELDIVLIMTVNPGFGGQEFIHSQLSKISTVRKMIQDRNLKTQVSV
HCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DGGVNFSNAADIIKAGANILVAGSAIFKAEDMKKAVNDLKNLSL
CCCCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]