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The map label for this gene is ssb [H]

Identifier: 190571216

GI number: 190571216

Start: 894385

End: 894867

Strand: Direct

Name: ssb [H]

Synonym: WPa_0815

Alternate gene names: 190571216

Gene position: 894385-894867 (Clockwise)

Preceding gene: 190571215

Following gene: 190571217

Centisome position: 60.33

GC content: 34.58

Gene sequence:

>483_bases
ATGTCTAGTGGTACTATAAATAAAGTCATATTAGTTGGTAATCTAGGAAAAGATCCTGAAATTAGGACTACACAAAATGG
AAAAGAGATGGCAAGTTTTTCAATAGCCACGTCTGAAAGTTGGACTGACAAATTTTCTGGTACGCGCTCTGAAAAGACAG
AATGGCATAATATTGTAATTTTTAGTGAAGGATTAGTAAAAATTGTTAAGGATTTTGCGCGCAAAGGTAGTAAAGTTTAC
GTTGAAGGTTCTCTGAGAACTAGAAAATGGACTGACCAAAATGGTAGCGAAAGGTATACGACAGAGGTGGTGCTATATAA
CTTTAATAGTGCCCTTACCCTTTTAGATTCACGAAACAGTATGTCAAACTCCGATTACAAGCCAAGTGAATACAAACAAA
ATGAAACAGAACAAAAAGATAAACACGGAAGTTTTGACAACGATATAAAAGACGAACTAATCGATGATGAAATACCATTT
TAA

Upstream 100 bases:

>100_bases
AAAGGTCGCGGGTTCGAATCCCTCCAAGCGCGTTTTTAATTAAATTTGACAATAATACTCTCACATAAGATAATAAAGAG
ATTTATTTTAAAGCATAATT

Downstream 100 bases:

>100_bases
TAACTTCAATTGAAATCTACATTTTTATGGACTGCTTGTGTTACTCCTTTTAATTGCAGTGGAGATAGTATAGATTACCA
AAGCTTGCAGCGTTTACTAA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSSGTINKVILVGNLGKDPEIRTTQNGKEMASFSIATSESWTDKFSGTRSEKTEWHNIVIFSEGLVKIVKDFARKGSKVY
VEGSLRTRKWTDQNGSERYTTEVVLYNFNSALTLLDSRNSMSNSDYKPSEYKQNETEQKDKHGSFDNDIKDELIDDEIPF

Sequences:

>Translated_160_residues
MSSGTINKVILVGNLGKDPEIRTTQNGKEMASFSIATSESWTDKFSGTRSEKTEWHNIVIFSEGLVKIVKDFARKGSKVY
VEGSLRTRKWTDQNGSERYTTEVVLYNFNSALTLLDSRNSMSNSDYKPSEYKQNETEQKDKHGSFDNDIKDELIDDEIPF
>Mature_159_residues
SSGTINKVILVGNLGKDPEIRTTQNGKEMASFSIATSESWTDKFSGTRSEKTEWHNIVIFSEGLVKIVKDFARKGSKVYV
EGSLRTRKWTDQNGSERYTTEVVLYNFNSALTLLDSRNSMSNSDYKPSEYKQNETEQKDKHGSFDNDIKDELIDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=109, Percent_Identity=33.0275229357798, Blast_Score=74, Evalue=8e-14,
Organism=Escherichia coli, GI1790494, Length=120, Percent_Identity=53.3333333333333, Blast_Score=140, Evalue=4e-35,
Organism=Drosophila melanogaster, GI85725234, Length=100, Percent_Identity=30, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24647376, Length=100, Percent_Identity=30, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18220; Mature: 18089

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGTINKVILVGNLGKDPEIRTTQNGKEMASFSIATSESWTDKFSGTRSEKTEWHNIVI
CCCCCCEEEEEEECCCCCCCCEECCCCCHHHEEEEECCCCCCHHHCCCCCCCCCEEEEEE
FSEGLVKIVKDFARKGSKVYVEGSLRTRKWTDQNGSERYTTEVVLYNFNSALTLLDSRNS
ECCCHHHHHHHHHHCCCEEEEECCCEECEECCCCCCCEEEEEEEEEECCCEEEEEECCCC
MSNSDYKPSEYKQNETEQKDKHGSFDNDIKDELIDDEIPF
CCCCCCCCCHHCCCCCHHHHHCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
SSGTINKVILVGNLGKDPEIRTTQNGKEMASFSIATSESWTDKFSGTRSEKTEWHNIVI
CCCCCEEEEEEECCCCCCCCEECCCCCHHHEEEEECCCCCCHHHCCCCCCCCCEEEEEE
FSEGLVKIVKDFARKGSKVYVEGSLRTRKWTDQNGSERYTTEVVLYNFNSALTLLDSRNS
ECCCHHHHHHHHHHCCCEEEEECCCEECEECCCCCCCEEEEEEEEEECCCEEEEEECCCC
MSNSDYKPSEYKQNETEQKDKHGSFDNDIKDELIDDEIPF
CCCCCCCCCHHCCCCCHHHHHCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA