| Definition | Wolbachia endosymbiont of Culex quinquefasciatus Pel, complete genome. |
|---|---|
| Accession | NC_010981 |
| Length | 1,482,455 |
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The map label for this gene is 190570568
Identifier: 190570568
GI number: 190570568
Start: 106468
End: 107631
Strand: Direct
Name: 190570568
Synonym: WPa_0102
Alternate gene names: NA
Gene position: 106468-107631 (Clockwise)
Preceding gene: 190570567
Following gene: 190570569
Centisome position: 7.18
GC content: 36.6
Gene sequence:
>1164_bases ATGTCACTTACTGATATCGCTCACCGTGTTAATGAACTTGCTTCATCATGGGAGCAATTTAAATTAATAAATGATCGCAA ACTAAAAGAAATCGAAAGCAAAGGACCTGAGCAGCTATGCAAGATAAATAGTAATATTGATAATTGCAAAGAGCGCTTAG ATTTTATTGAAACTTCAGCTCAACGCCCAGAGATTAGCACAGATTTTAATACAGGTGATAAATATTTTTCTGATTATATC CGCAAAGGAATGGAAAACAGGTTATCACACAAAACCCTAAGTGGAGATGACAATGATATTGGAGGGTATTTAGTTACTCC TCACATTGTAAAACGGATAAACAAGCGTATAGCTGATTCATCTCCAATGCGGCAAATATGTTCTAGTCAAAGAATCTCTA CTGAAACGCTGGATTATATTATAGAAGATTGTGACCGTGCTGGTGCAGGTTGGAGTGGTGAAACAGTAGAAGATGAAGAT GGTGGCTATAAATCCAAATATGATTTTGCAAAAGACACAAGTACACCTAAAATTCAAAAGATTTCCATCACAACTTACGA GCTCTATGCTCAGCCGCAAATATCACAAAAATTGCTCGATGATGCATTTGTCAATGTTGAAAGTTGGCTTGTAGAAAAGG TTGCCGAAACTTTCAGTAAGAAAGAGAATGAAGCCTTCATTAAAGGTGATGGCACTTTTCAGCCTAAAGGAATTTTAACT TACGAAAATGGAAATGGTCATAATAAGATAGAGCAAATTAAAGCTGATAAGCTAGACAGCGACGCCATAATGATATTGTA CTACTCTCTAAATGAACATTACTCTAAAAATGCATCATTTTTGATGAACAGGAGTACGTTAAAGGACGTGAGGCTACTAA AATCTGAAACAGGTCAGTATCTTTGGCAGCCGAGTTTATCGCTTGAAACTCCAGATACTTTGATGGGAATACCGGTATAT CAATCTGCTGATATGCCACCTACAATGATTGCAGTAGCGGATTTCAAACAAGCTTATAAGATCGTGGATAACAGAGGAAT GAGAATATTGAGAGACCCTTATACAAACAAACCTTATGTTAGATTTTTTGTTACTAAGCGTGTCGGTGGGGAGGTTGTCA ACACCAGTGCTATTAAATTATTGAAAATTGCAAGCAAGTACTAA
Upstream 100 bases:
>100_bases TTTTTCTGAATGCAGGTTGCATGACAACGCTGAGATTACTGATAAAGATTACCTTCAAATTACAATAACTATTCTAATTT TATTTTTAAAGGAGGCTATT
Downstream 100 bases:
>100_bases AATTTTTATGAAATAGTTGACATATTATACTTTTTATGTAATAATTAAATTATTGTTAATTTAAGGAGTAAAATATGTTA GAAAAAATAAAAGAGTTTTT
Product: phage major capsid protein, HK97 family
Products: NA
Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Capsid Protein Of Prophage; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Phage Capsid Family; Phage Prohead Protease; Prophage; Phage Capsid Protein Gp; Bacteriophage Protein; Phage Prohead Protease And Phage Capsid Protein; Phage Phi-C31 Capsid; Capsid C; Phage Capsid Family Protein
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSLTDIAHRVNELASSWEQFKLINDRKLKEIESKGPEQLCKINSNIDNCKERLDFIETSAQRPEISTDFNTGDKYFSDYI RKGMENRLSHKTLSGDDNDIGGYLVTPHIVKRINKRIADSSPMRQICSSQRISTETLDYIIEDCDRAGAGWSGETVEDED GGYKSKYDFAKDTSTPKIQKISITTYELYAQPQISQKLLDDAFVNVESWLVEKVAETFSKKENEAFIKGDGTFQPKGILT YENGNGHNKIEQIKADKLDSDAIMILYYSLNEHYSKNASFLMNRSTLKDVRLLKSETGQYLWQPSLSLETPDTLMGIPVY QSADMPPTMIAVADFKQAYKIVDNRGMRILRDPYTNKPYVRFFVTKRVGGEVVNTSAIKLLKIASKY
Sequences:
>Translated_387_residues MSLTDIAHRVNELASSWEQFKLINDRKLKEIESKGPEQLCKINSNIDNCKERLDFIETSAQRPEISTDFNTGDKYFSDYI RKGMENRLSHKTLSGDDNDIGGYLVTPHIVKRINKRIADSSPMRQICSSQRISTETLDYIIEDCDRAGAGWSGETVEDED GGYKSKYDFAKDTSTPKIQKISITTYELYAQPQISQKLLDDAFVNVESWLVEKVAETFSKKENEAFIKGDGTFQPKGILT YENGNGHNKIEQIKADKLDSDAIMILYYSLNEHYSKNASFLMNRSTLKDVRLLKSETGQYLWQPSLSLETPDTLMGIPVY QSADMPPTMIAVADFKQAYKIVDNRGMRILRDPYTNKPYVRFFVTKRVGGEVVNTSAIKLLKIASKY >Mature_386_residues SLTDIAHRVNELASSWEQFKLINDRKLKEIESKGPEQLCKINSNIDNCKERLDFIETSAQRPEISTDFNTGDKYFSDYIR KGMENRLSHKTLSGDDNDIGGYLVTPHIVKRINKRIADSSPMRQICSSQRISTETLDYIIEDCDRAGAGWSGETVEDEDG GYKSKYDFAKDTSTPKIQKISITTYELYAQPQISQKLLDDAFVNVESWLVEKVAETFSKKENEAFIKGDGTFQPKGILTY ENGNGHNKIEQIKADKLDSDAIMILYYSLNEHYSKNASFLMNRSTLKDVRLLKSETGQYLWQPSLSLETPDTLMGIPVYQ SADMPPTMIAVADFKQAYKIVDNRGMRILRDPYTNKPYVRFFVTKRVGGEVVNTSAIKLLKIASKY
Specific function: Unknown
COG id: COG4653
COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44071; Mature: 43940
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTDIAHRVNELASSWEQFKLINDRKLKEIESKGPEQLCKINSNIDNCKERLDFIETSA CCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCC QRPEISTDFNTGDKYFSDYIRKGMENRLSHKTLSGDDNDIGGYLVTPHIVKRINKRIADS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHCCC SPMRQICSSQRISTETLDYIIEDCDRAGAGWSGETVEDEDGGYKSKYDFAKDTSTPKIQK CHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE ISITTYELYAQPQISQKLLDDAFVNVESWLVEKVAETFSKKENEAFIKGDGTFQPKGILT EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEE YENGNGHNKIEQIKADKLDSDAIMILYYSLNEHYSKNASFLMNRSTLKDVRLLKSETGQY EECCCCCCHHHHHHHHCCCCCEEEEEEEECCHHHCCCHHHEECHHHHHHHHHHHHHCCCE LWQPSLSLETPDTLMGIPVYQSADMPPTMIAVADFKQAYKIVDNRGMRILRDPYTNKPYV EECCCCCCCCCCCEECCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCCCEE RFFVTKRVGGEVVNTSAIKLLKIASKY EEEEEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SLTDIAHRVNELASSWEQFKLINDRKLKEIESKGPEQLCKINSNIDNCKERLDFIETSA CHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCC QRPEISTDFNTGDKYFSDYIRKGMENRLSHKTLSGDDNDIGGYLVTPHIVKRINKRIADS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHHCCC SPMRQICSSQRISTETLDYIIEDCDRAGAGWSGETVEDEDGGYKSKYDFAKDTSTPKIQK CHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE ISITTYELYAQPQISQKLLDDAFVNVESWLVEKVAETFSKKENEAFIKGDGTFQPKGILT EEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEE YENGNGHNKIEQIKADKLDSDAIMILYYSLNEHYSKNASFLMNRSTLKDVRLLKSETGQY EECCCCCCHHHHHHHHCCCCCEEEEEEEECCHHHCCCHHHEECHHHHHHHHHHHHHCCCE LWQPSLSLETPDTLMGIPVYQSADMPPTMIAVADFKQAYKIVDNRGMRILRDPYTNKPYV EECCCCCCCCCCCEECCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEECCCCCCCEE RFFVTKRVGGEVVNTSAIKLLKIASKY EEEEEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA